Amino acid dipepetide frequency for Rabovirus A

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
6.427AlaAla: 6.427 ± 0.0
2.571AlaCys: 2.571 ± 0.0
2.999AlaAsp: 2.999 ± 0.0
3.428AlaGlu: 3.428 ± 0.0
2.571AlaPhe: 2.571 ± 0.0
3.428AlaGly: 3.428 ± 0.0
0.428AlaHis: 0.428 ± 0.0
3.856AlaIle: 3.856 ± 0.0
2.571AlaLys: 2.571 ± 0.0
5.57AlaLeu: 5.57 ± 0.0
1.714AlaMet: 1.714 ± 0.0
2.571AlaAsn: 2.571 ± 0.0
1.714AlaPro: 1.714 ± 0.0
2.142AlaGln: 2.142 ± 0.0
1.714AlaArg: 1.714 ± 0.0
6.427AlaSer: 6.427 ± 0.0
6.427AlaThr: 6.427 ± 0.0
5.998AlaVal: 5.998 ± 0.0
1.285AlaTrp: 1.285 ± 0.0
2.999AlaTyr: 2.999 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.714CysAla: 1.714 ± 0.0
0.428CysCys: 0.428 ± 0.0
0.857CysAsp: 0.857 ± 0.0
2.142CysGlu: 2.142 ± 0.0
0.857CysPhe: 0.857 ± 0.0
3.428CysGly: 3.428 ± 0.0
0.428CysHis: 0.428 ± 0.0
2.142CysIle: 2.142 ± 0.0
0.857CysLys: 0.857 ± 0.0
1.285CysLeu: 1.285 ± 0.0
0.428CysMet: 0.428 ± 0.0
1.285CysAsn: 1.285 ± 0.0
1.714CysPro: 1.714 ± 0.0
1.714CysGln: 1.714 ± 0.0
0.428CysArg: 0.428 ± 0.0
1.714CysSer: 1.714 ± 0.0
1.714CysThr: 1.714 ± 0.0
3.428CysVal: 3.428 ± 0.0
0.428CysTrp: 0.428 ± 0.0
2.142CysTyr: 2.142 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
4.284AspAla: 4.284 ± 0.0
0.857AspCys: 0.857 ± 0.0
2.571AspAsp: 2.571 ± 0.0
2.571AspGlu: 2.571 ± 0.0
2.571AspPhe: 2.571 ± 0.0
3.428AspGly: 3.428 ± 0.0
0.857AspHis: 0.857 ± 0.0
3.428AspIle: 3.428 ± 0.0
4.713AspLys: 4.713 ± 0.0
5.141AspLeu: 5.141 ± 0.0
1.285AspMet: 1.285 ± 0.0
2.142AspAsn: 2.142 ± 0.0
2.142AspPro: 2.142 ± 0.0
2.142AspGln: 2.142 ± 0.0
2.571AspArg: 2.571 ± 0.0
4.284AspSer: 4.284 ± 0.0
2.571AspThr: 2.571 ± 0.0
3.428AspVal: 3.428 ± 0.0
2.142AspTrp: 2.142 ± 0.0
1.714AspTyr: 1.714 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.856GluAla: 3.856 ± 0.0
3.856GluCys: 3.856 ± 0.0
1.285GluAsp: 1.285 ± 0.0
5.998GluGlu: 5.998 ± 0.0
2.571GluPhe: 2.571 ± 0.0
3.428GluGly: 3.428 ± 0.0
0.857GluHis: 0.857 ± 0.0
2.999GluIle: 2.999 ± 0.0
1.714GluLys: 1.714 ± 0.0
3.856GluLeu: 3.856 ± 0.0
2.142GluMet: 2.142 ± 0.0
2.142GluAsn: 2.142 ± 0.0
2.999GluPro: 2.999 ± 0.0
3.428GluGln: 3.428 ± 0.0
1.285GluArg: 1.285 ± 0.0
2.142GluSer: 2.142 ± 0.0
5.141GluThr: 5.141 ± 0.0
2.571GluVal: 2.571 ± 0.0
2.142GluTrp: 2.142 ± 0.0
1.714GluTyr: 1.714 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.142PheAla: 2.142 ± 0.0
2.142PheCys: 2.142 ± 0.0
2.999PheAsp: 2.999 ± 0.0
1.714PheGlu: 1.714 ± 0.0
0.428PhePhe: 0.428 ± 0.0
2.571PheGly: 2.571 ± 0.0
0.857PheHis: 0.857 ± 0.0
1.714PheIle: 1.714 ± 0.0
2.999PheLys: 2.999 ± 0.0
1.285PheLeu: 1.285 ± 0.0
0.428PheMet: 0.428 ± 0.0
2.999PheAsn: 2.999 ± 0.0
4.284PhePro: 4.284 ± 0.0
2.999PheGln: 2.999 ± 0.0
2.571PheArg: 2.571 ± 0.0
2.999PheSer: 2.999 ± 0.0
2.571PheThr: 2.571 ± 0.0
2.999PheVal: 2.999 ± 0.0
0.0PheTrp: 0.0 ± 0.0
1.285PheTyr: 1.285 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
2.571GlyAla: 2.571 ± 0.0
1.714GlyCys: 1.714 ± 0.0
5.141GlyAsp: 5.141 ± 0.0
2.999GlyGlu: 2.999 ± 0.0
4.284GlyPhe: 4.284 ± 0.0
2.999GlyGly: 2.999 ± 0.0
0.428GlyHis: 0.428 ± 0.0
3.856GlyIle: 3.856 ± 0.0
7.284GlyLys: 7.284 ± 0.0
3.428GlyLeu: 3.428 ± 0.0
2.999GlyMet: 2.999 ± 0.0
2.999GlyAsn: 2.999 ± 0.0
4.713GlyPro: 4.713 ± 0.0
3.428GlyGln: 3.428 ± 0.0
2.142GlyArg: 2.142 ± 0.0
4.284GlySer: 4.284 ± 0.0
5.141GlyThr: 5.141 ± 0.0
3.428GlyVal: 3.428 ± 0.0
0.857GlyTrp: 0.857 ± 0.0
3.428GlyTyr: 3.428 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.857HisAla: 0.857 ± 0.0
0.428HisCys: 0.428 ± 0.0
1.285HisAsp: 1.285 ± 0.0
0.428HisGlu: 0.428 ± 0.0
1.285HisPhe: 1.285 ± 0.0
1.714HisGly: 1.714 ± 0.0
0.428HisHis: 0.428 ± 0.0
2.999HisIle: 2.999 ± 0.0
1.714HisLys: 1.714 ± 0.0
0.857HisLeu: 0.857 ± 0.0
0.428HisMet: 0.428 ± 0.0
1.285HisAsn: 1.285 ± 0.0
0.428HisPro: 0.428 ± 0.0
1.285HisGln: 1.285 ± 0.0
0.428HisArg: 0.428 ± 0.0
0.428HisSer: 0.428 ± 0.0
0.0HisThr: 0.0 ± 0.0
2.999HisVal: 2.999 ± 0.0
0.857HisTrp: 0.857 ± 0.0
2.571HisTyr: 2.571 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.142IleAla: 2.142 ± 0.0
2.999IleCys: 2.999 ± 0.0
4.713IleAsp: 4.713 ± 0.0
2.142IleGlu: 2.142 ± 0.0
1.714IlePhe: 1.714 ± 0.0
1.714IleGly: 1.714 ± 0.0
2.571IleHis: 2.571 ± 0.0
4.284IleIle: 4.284 ± 0.0
4.284IleLys: 4.284 ± 0.0
3.856IleLeu: 3.856 ± 0.0
1.285IleMet: 1.285 ± 0.0
4.284IleAsn: 4.284 ± 0.0
5.141IlePro: 5.141 ± 0.0
3.856IleGln: 3.856 ± 0.0
1.285IleArg: 1.285 ± 0.0
3.856IleSer: 3.856 ± 0.0
4.284IleThr: 4.284 ± 0.0
2.571IleVal: 2.571 ± 0.0
0.428IleTrp: 0.428 ± 0.0
3.856IleTyr: 3.856 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.571LysAla: 2.571 ± 0.0
0.857LysCys: 0.857 ± 0.0
3.856LysAsp: 3.856 ± 0.0
4.284LysGlu: 4.284 ± 0.0
3.428LysPhe: 3.428 ± 0.0
3.428LysGly: 3.428 ± 0.0
2.999LysHis: 2.999 ± 0.0
3.856LysIle: 3.856 ± 0.0
3.856LysLys: 3.856 ± 0.0
6.855LysLeu: 6.855 ± 0.0
1.714LysMet: 1.714 ± 0.0
3.428LysAsn: 3.428 ± 0.0
2.999LysPro: 2.999 ± 0.0
1.714LysGln: 1.714 ± 0.0
5.998LysArg: 5.998 ± 0.0
4.713LysSer: 4.713 ± 0.0
3.856LysThr: 3.856 ± 0.0
3.428LysVal: 3.428 ± 0.0
0.428LysTrp: 0.428 ± 0.0
2.142LysTyr: 2.142 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
3.856LeuAla: 3.856 ± 0.0
2.571LeuCys: 2.571 ± 0.0
7.284LeuAsp: 7.284 ± 0.0
5.998LeuGlu: 5.998 ± 0.0
2.999LeuPhe: 2.999 ± 0.0
5.57LeuGly: 5.57 ± 0.0
1.285LeuHis: 1.285 ± 0.0
3.428LeuIle: 3.428 ± 0.0
6.427LeuLys: 6.427 ± 0.0
4.284LeuLeu: 4.284 ± 0.0
0.857LeuMet: 0.857 ± 0.0
2.999LeuAsn: 2.999 ± 0.0
3.856LeuPro: 3.856 ± 0.0
2.571LeuGln: 2.571 ± 0.0
3.428LeuArg: 3.428 ± 0.0
3.856LeuSer: 3.856 ± 0.0
3.856LeuThr: 3.856 ± 0.0
4.284LeuVal: 4.284 ± 0.0
0.0LeuTrp: 0.0 ± 0.0
0.428LeuTyr: 0.428 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.571MetAla: 2.571 ± 0.0
1.285MetCys: 1.285 ± 0.0
0.857MetAsp: 0.857 ± 0.0
1.714MetGlu: 1.714 ± 0.0
1.285MetPhe: 1.285 ± 0.0
2.571MetGly: 2.571 ± 0.0
1.714MetHis: 1.714 ± 0.0
1.285MetIle: 1.285 ± 0.0
2.999MetLys: 2.999 ± 0.0
1.714MetLeu: 1.714 ± 0.0
1.285MetMet: 1.285 ± 0.0
0.857MetAsn: 0.857 ± 0.0
2.571MetPro: 2.571 ± 0.0
0.428MetGln: 0.428 ± 0.0
0.428MetArg: 0.428 ± 0.0
0.428MetSer: 0.428 ± 0.0
0.857MetThr: 0.857 ± 0.0
2.142MetVal: 2.142 ± 0.0
0.428MetTrp: 0.428 ± 0.0
0.428MetTyr: 0.428 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
2.142AsnAla: 2.142 ± 0.0
0.0AsnCys: 0.0 ± 0.0
1.714AsnAsp: 1.714 ± 0.0
0.857AsnGlu: 0.857 ± 0.0
1.285AsnPhe: 1.285 ± 0.0
3.428AsnGly: 3.428 ± 0.0
0.857AsnHis: 0.857 ± 0.0
2.999AsnIle: 2.999 ± 0.0
1.285AsnLys: 1.285 ± 0.0
3.428AsnLeu: 3.428 ± 0.0
1.714AsnMet: 1.714 ± 0.0
2.571AsnAsn: 2.571 ± 0.0
3.856AsnPro: 3.856 ± 0.0
2.571AsnGln: 2.571 ± 0.0
2.142AsnArg: 2.142 ± 0.0
2.571AsnSer: 2.571 ± 0.0
2.142AsnThr: 2.142 ± 0.0
5.57AsnVal: 5.57 ± 0.0
0.857AsnTrp: 0.857 ± 0.0
2.142AsnTyr: 2.142 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
3.856ProAla: 3.856 ± 0.0
0.857ProCys: 0.857 ± 0.0
5.141ProAsp: 5.141 ± 0.0
3.856ProGlu: 3.856 ± 0.0
2.999ProPhe: 2.999 ± 0.0
4.713ProGly: 4.713 ± 0.0
0.428ProHis: 0.428 ± 0.0
5.141ProIle: 5.141 ± 0.0
3.428ProLys: 3.428 ± 0.0
2.142ProLeu: 2.142 ± 0.0
2.142ProMet: 2.142 ± 0.0
2.142ProAsn: 2.142 ± 0.0
4.284ProPro: 4.284 ± 0.0
0.857ProGln: 0.857 ± 0.0
1.714ProArg: 1.714 ± 0.0
3.856ProSer: 3.856 ± 0.0
2.999ProThr: 2.999 ± 0.0
5.57ProVal: 5.57 ± 0.0
1.285ProTrp: 1.285 ± 0.0
2.142ProTyr: 2.142 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
1.285GlnAla: 1.285 ± 0.0
0.857GlnCys: 0.857 ± 0.0
1.285GlnAsp: 1.285 ± 0.0
2.571GlnGlu: 2.571 ± 0.0
2.142GlnPhe: 2.142 ± 0.0
5.141GlnGly: 5.141 ± 0.0
0.857GlnHis: 0.857 ± 0.0
2.999GlnIle: 2.999 ± 0.0
2.999GlnLys: 2.999 ± 0.0
2.999GlnLeu: 2.999 ± 0.0
0.857GlnMet: 0.857 ± 0.0
2.142GlnAsn: 2.142 ± 0.0
1.714GlnPro: 1.714 ± 0.0
2.142GlnGln: 2.142 ± 0.0
1.285GlnArg: 1.285 ± 0.0
1.714GlnSer: 1.714 ± 0.0
2.142GlnThr: 2.142 ± 0.0
2.571GlnVal: 2.571 ± 0.0
0.857GlnTrp: 0.857 ± 0.0
0.0GlnTyr: 0.0 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.428ArgAla: 3.428 ± 0.0
1.714ArgCys: 1.714 ± 0.0
1.714ArgAsp: 1.714 ± 0.0
2.571ArgGlu: 2.571 ± 0.0
2.999ArgPhe: 2.999 ± 0.0
2.571ArgGly: 2.571 ± 0.0
1.285ArgHis: 1.285 ± 0.0
2.571ArgIle: 2.571 ± 0.0
0.857ArgLys: 0.857 ± 0.0
2.999ArgLeu: 2.999 ± 0.0
0.857ArgMet: 0.857 ± 0.0
1.285ArgAsn: 1.285 ± 0.0
2.999ArgPro: 2.999 ± 0.0
0.857ArgGln: 0.857 ± 0.0
2.999ArgArg: 2.999 ± 0.0
2.571ArgSer: 2.571 ± 0.0
1.285ArgThr: 1.285 ± 0.0
3.428ArgVal: 3.428 ± 0.0
0.857ArgTrp: 0.857 ± 0.0
1.285ArgTyr: 1.285 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.141SerAla: 5.141 ± 0.0
0.428SerCys: 0.428 ± 0.0
2.571SerAsp: 2.571 ± 0.0
2.999SerGlu: 2.999 ± 0.0
1.714SerPhe: 1.714 ± 0.0
5.141SerGly: 5.141 ± 0.0
1.285SerHis: 1.285 ± 0.0
5.57SerIle: 5.57 ± 0.0
4.713SerLys: 4.713 ± 0.0
5.141SerLeu: 5.141 ± 0.0
2.571SerMet: 2.571 ± 0.0
1.714SerAsn: 1.714 ± 0.0
3.428SerPro: 3.428 ± 0.0
1.285SerGln: 1.285 ± 0.0
2.571SerArg: 2.571 ± 0.0
5.141SerSer: 5.141 ± 0.0
4.284SerThr: 4.284 ± 0.0
3.428SerVal: 3.428 ± 0.0
0.857SerTrp: 0.857 ± 0.0
1.714SerTyr: 1.714 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
5.57ThrAla: 5.57 ± 0.0
2.142ThrCys: 2.142 ± 0.0
1.285ThrAsp: 1.285 ± 0.0
2.142ThrGlu: 2.142 ± 0.0
2.999ThrPhe: 2.999 ± 0.0
4.284ThrGly: 4.284 ± 0.0
0.857ThrHis: 0.857 ± 0.0
1.714ThrIle: 1.714 ± 0.0
5.57ThrLys: 5.57 ± 0.0
5.57ThrLeu: 5.57 ± 0.0
1.285ThrMet: 1.285 ± 0.0
2.999ThrAsn: 2.999 ± 0.0
2.999ThrPro: 2.999 ± 0.0
3.856ThrGln: 3.856 ± 0.0
2.571ThrArg: 2.571 ± 0.0
4.284ThrSer: 4.284 ± 0.0
5.141ThrThr: 5.141 ± 0.0
2.999ThrVal: 2.999 ± 0.0
1.285ThrTrp: 1.285 ± 0.0
3.856ThrTyr: 3.856 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
8.141ValAla: 8.141 ± 0.0
0.857ValCys: 0.857 ± 0.0
3.428ValAsp: 3.428 ± 0.0
5.57ValGlu: 5.57 ± 0.0
2.571ValPhe: 2.571 ± 0.0
5.141ValGly: 5.141 ± 0.0
2.142ValHis: 2.142 ± 0.0
3.428ValIle: 3.428 ± 0.0
4.713ValLys: 4.713 ± 0.0
4.284ValLeu: 4.284 ± 0.0
2.142ValMet: 2.142 ± 0.0
2.142ValAsn: 2.142 ± 0.0
2.571ValPro: 2.571 ± 0.0
0.857ValGln: 0.857 ± 0.0
3.856ValArg: 3.856 ± 0.0
4.713ValSer: 4.713 ± 0.0
4.713ValThr: 4.713 ± 0.0
6.855ValVal: 6.855 ± 0.0
2.142ValTrp: 2.142 ± 0.0
1.285ValTyr: 1.285 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.285TrpAla: 1.285 ± 0.0
0.857TrpCys: 0.857 ± 0.0
0.857TrpAsp: 0.857 ± 0.0
0.857TrpGlu: 0.857 ± 0.0
0.857TrpPhe: 0.857 ± 0.0
0.428TrpGly: 0.428 ± 0.0
1.285TrpHis: 1.285 ± 0.0
1.714TrpIle: 1.714 ± 0.0
0.857TrpLys: 0.857 ± 0.0
2.142TrpLeu: 2.142 ± 0.0
1.285TrpMet: 1.285 ± 0.0
0.428TrpAsn: 0.428 ± 0.0
0.428TrpPro: 0.428 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.428TrpArg: 0.428 ± 0.0
0.0TrpSer: 0.0 ± 0.0
2.571TrpThr: 2.571 ± 0.0
2.142TrpVal: 2.142 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.999TyrAla: 2.999 ± 0.0
1.714TyrCys: 1.714 ± 0.0
2.999TyrAsp: 2.999 ± 0.0
1.285TyrGlu: 1.285 ± 0.0
0.857TyrPhe: 0.857 ± 0.0
2.999TyrGly: 2.999 ± 0.0
0.857TyrHis: 0.857 ± 0.0
1.285TyrIle: 1.285 ± 0.0
2.571TyrLys: 2.571 ± 0.0
2.999TyrLeu: 2.999 ± 0.0
0.0TyrMet: 0.0 ± 0.0
1.714TyrAsn: 1.714 ± 0.0
4.713TyrPro: 4.713 ± 0.0
0.428TyrGln: 0.428 ± 0.0
1.285TyrArg: 1.285 ± 0.0
1.714TyrSer: 1.714 ± 0.0
1.714TyrThr: 1.714 ± 0.0
1.714TyrVal: 1.714 ± 0.0
1.285TyrTrp: 1.285 ± 0.0
1.285TyrTyr: 1.285 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2335 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski