Amino acid dipepetide frequency for Hubei tick virus 2

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
6.765AlaAla: 6.765 ± 0.0
0.322AlaCys: 0.322 ± 0.0
1.611AlaAsp: 1.611 ± 0.0
6.765AlaGlu: 6.765 ± 0.0
3.222AlaPhe: 3.222 ± 0.0
4.51AlaGly: 4.51 ± 0.0
0.322AlaHis: 0.322 ± 0.0
6.121AlaIle: 6.121 ± 0.0
3.866AlaLys: 3.866 ± 0.0
6.121AlaLeu: 6.121 ± 0.0
2.577AlaMet: 2.577 ± 0.0
1.611AlaAsn: 1.611 ± 0.0
2.899AlaPro: 2.899 ± 0.0
2.899AlaGln: 2.899 ± 0.0
4.832AlaArg: 4.832 ± 0.0
4.188AlaSer: 4.188 ± 0.0
3.866AlaThr: 3.866 ± 0.0
5.799AlaVal: 5.799 ± 0.0
1.611AlaTrp: 1.611 ± 0.0
3.222AlaTyr: 3.222 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.322CysAla: 0.322 ± 0.0
0.0CysCys: 0.0 ± 0.0
1.933CysAsp: 1.933 ± 0.0
0.966CysGlu: 0.966 ± 0.0
0.644CysPhe: 0.644 ± 0.0
2.255CysGly: 2.255 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.644CysIle: 0.644 ± 0.0
0.966CysLys: 0.966 ± 0.0
2.899CysLeu: 2.899 ± 0.0
0.322CysMet: 0.322 ± 0.0
0.644CysAsn: 0.644 ± 0.0
0.644CysPro: 0.644 ± 0.0
1.289CysGln: 1.289 ± 0.0
2.577CysArg: 2.577 ± 0.0
0.966CysSer: 0.966 ± 0.0
0.644CysThr: 0.644 ± 0.0
0.644CysVal: 0.644 ± 0.0
1.289CysTrp: 1.289 ± 0.0
1.289CysTyr: 1.289 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.577AspAla: 2.577 ± 0.0
0.322AspCys: 0.322 ± 0.0
4.51AspAsp: 4.51 ± 0.0
5.477AspGlu: 5.477 ± 0.0
4.188AspPhe: 4.188 ± 0.0
1.611AspGly: 1.611 ± 0.0
1.933AspHis: 1.933 ± 0.0
4.188AspIle: 4.188 ± 0.0
2.577AspLys: 2.577 ± 0.0
5.799AspLeu: 5.799 ± 0.0
1.611AspMet: 1.611 ± 0.0
2.577AspAsn: 2.577 ± 0.0
4.51AspPro: 4.51 ± 0.0
2.255AspGln: 2.255 ± 0.0
1.933AspArg: 1.933 ± 0.0
2.577AspSer: 2.577 ± 0.0
3.544AspThr: 3.544 ± 0.0
1.933AspVal: 1.933 ± 0.0
1.289AspTrp: 1.289 ± 0.0
2.255AspTyr: 2.255 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.544GluAla: 3.544 ± 0.0
0.966GluCys: 0.966 ± 0.0
1.933GluAsp: 1.933 ± 0.0
4.832GluGlu: 4.832 ± 0.0
2.577GluPhe: 2.577 ± 0.0
4.188GluGly: 4.188 ± 0.0
3.544GluHis: 3.544 ± 0.0
5.799GluIle: 5.799 ± 0.0
4.188GluLys: 4.188 ± 0.0
6.121GluLeu: 6.121 ± 0.0
1.289GluMet: 1.289 ± 0.0
2.255GluAsn: 2.255 ± 0.0
4.832GluPro: 4.832 ± 0.0
1.611GluGln: 1.611 ± 0.0
3.544GluArg: 3.544 ± 0.0
1.933GluSer: 1.933 ± 0.0
3.222GluThr: 3.222 ± 0.0
4.832GluVal: 4.832 ± 0.0
1.289GluTrp: 1.289 ± 0.0
2.577GluTyr: 2.577 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
4.832PheAla: 4.832 ± 0.0
0.0PheCys: 0.0 ± 0.0
4.832PheAsp: 4.832 ± 0.0
3.544PheGlu: 3.544 ± 0.0
1.611PhePhe: 1.611 ± 0.0
3.866PheGly: 3.866 ± 0.0
1.611PheHis: 1.611 ± 0.0
1.611PheIle: 1.611 ± 0.0
3.544PheLys: 3.544 ± 0.0
3.544PheLeu: 3.544 ± 0.0
1.611PheMet: 1.611 ± 0.0
2.899PheAsn: 2.899 ± 0.0
0.966PhePro: 0.966 ± 0.0
1.611PheGln: 1.611 ± 0.0
3.866PheArg: 3.866 ± 0.0
3.544PheSer: 3.544 ± 0.0
2.255PheThr: 2.255 ± 0.0
4.188PheVal: 4.188 ± 0.0
0.966PheTrp: 0.966 ± 0.0
0.966PheTyr: 0.966 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
4.832GlyAla: 4.832 ± 0.0
0.0GlyCys: 0.0 ± 0.0
3.544GlyAsp: 3.544 ± 0.0
2.899GlyGlu: 2.899 ± 0.0
2.899GlyPhe: 2.899 ± 0.0
2.255GlyGly: 2.255 ± 0.0
0.644GlyHis: 0.644 ± 0.0
3.544GlyIle: 3.544 ± 0.0
4.51GlyLys: 4.51 ± 0.0
5.799GlyLeu: 5.799 ± 0.0
1.289GlyMet: 1.289 ± 0.0
0.966GlyAsn: 0.966 ± 0.0
2.255GlyPro: 2.255 ± 0.0
1.933GlyGln: 1.933 ± 0.0
3.544GlyArg: 3.544 ± 0.0
1.933GlySer: 1.933 ± 0.0
2.255GlyThr: 2.255 ± 0.0
5.799GlyVal: 5.799 ± 0.0
0.966GlyTrp: 0.966 ± 0.0
1.933GlyTyr: 1.933 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.289HisAla: 1.289 ± 0.0
0.644HisCys: 0.644 ± 0.0
0.322HisAsp: 0.322 ± 0.0
1.289HisGlu: 1.289 ± 0.0
0.966HisPhe: 0.966 ± 0.0
1.611HisGly: 1.611 ± 0.0
0.322HisHis: 0.322 ± 0.0
1.289HisIle: 1.289 ± 0.0
0.644HisLys: 0.644 ± 0.0
1.933HisLeu: 1.933 ± 0.0
0.0HisMet: 0.0 ± 0.0
0.644HisAsn: 0.644 ± 0.0
1.611HisPro: 1.611 ± 0.0
3.544HisGln: 3.544 ± 0.0
1.289HisArg: 1.289 ± 0.0
1.289HisSer: 1.289 ± 0.0
0.322HisThr: 0.322 ± 0.0
2.899HisVal: 2.899 ± 0.0
0.644HisTrp: 0.644 ± 0.0
0.644HisTyr: 0.644 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
4.188IleAla: 4.188 ± 0.0
1.933IleCys: 1.933 ± 0.0
3.222IleAsp: 3.222 ± 0.0
1.933IleGlu: 1.933 ± 0.0
1.611IlePhe: 1.611 ± 0.0
4.51IleGly: 4.51 ± 0.0
1.933IleHis: 1.933 ± 0.0
3.222IleIle: 3.222 ± 0.0
4.188IleLys: 4.188 ± 0.0
3.866IleLeu: 3.866 ± 0.0
0.966IleMet: 0.966 ± 0.0
2.577IleAsn: 2.577 ± 0.0
3.866IlePro: 3.866 ± 0.0
2.255IleGln: 2.255 ± 0.0
3.544IleArg: 3.544 ± 0.0
2.577IleSer: 2.577 ± 0.0
2.577IleThr: 2.577 ± 0.0
3.222IleVal: 3.222 ± 0.0
0.322IleTrp: 0.322 ± 0.0
0.966IleTyr: 0.966 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
5.155LysAla: 5.155 ± 0.0
1.611LysCys: 1.611 ± 0.0
3.866LysAsp: 3.866 ± 0.0
3.222LysGlu: 3.222 ± 0.0
3.544LysPhe: 3.544 ± 0.0
3.866LysGly: 3.866 ± 0.0
1.611LysHis: 1.611 ± 0.0
3.866LysIle: 3.866 ± 0.0
4.188LysLys: 4.188 ± 0.0
2.899LysLeu: 2.899 ± 0.0
0.644LysMet: 0.644 ± 0.0
1.933LysAsn: 1.933 ± 0.0
2.577LysPro: 2.577 ± 0.0
3.866LysGln: 3.866 ± 0.0
2.577LysArg: 2.577 ± 0.0
4.188LysSer: 4.188 ± 0.0
4.188LysThr: 4.188 ± 0.0
2.577LysVal: 2.577 ± 0.0
2.577LysTrp: 2.577 ± 0.0
0.966LysTyr: 0.966 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
8.376LeuAla: 8.376 ± 0.0
2.577LeuCys: 2.577 ± 0.0
4.51LeuAsp: 4.51 ± 0.0
5.155LeuGlu: 5.155 ± 0.0
4.51LeuPhe: 4.51 ± 0.0
2.899LeuGly: 2.899 ± 0.0
1.611LeuHis: 1.611 ± 0.0
2.899LeuIle: 2.899 ± 0.0
8.054LeuLys: 8.054 ± 0.0
6.765LeuLeu: 6.765 ± 0.0
2.255LeuMet: 2.255 ± 0.0
4.51LeuAsn: 4.51 ± 0.0
2.255LeuPro: 2.255 ± 0.0
3.866LeuGln: 3.866 ± 0.0
5.799LeuArg: 5.799 ± 0.0
7.41LeuSer: 7.41 ± 0.0
3.866LeuThr: 3.866 ± 0.0
5.155LeuVal: 5.155 ± 0.0
0.322LeuTrp: 0.322 ± 0.0
1.933LeuTyr: 1.933 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.899MetAla: 2.899 ± 0.0
1.611MetCys: 1.611 ± 0.0
0.644MetAsp: 0.644 ± 0.0
0.966MetGlu: 0.966 ± 0.0
3.222MetPhe: 3.222 ± 0.0
0.966MetGly: 0.966 ± 0.0
1.289MetHis: 1.289 ± 0.0
0.644MetIle: 0.644 ± 0.0
2.577MetLys: 2.577 ± 0.0
1.933MetLeu: 1.933 ± 0.0
0.322MetMet: 0.322 ± 0.0
1.289MetAsn: 1.289 ± 0.0
0.644MetPro: 0.644 ± 0.0
0.644MetGln: 0.644 ± 0.0
1.933MetArg: 1.933 ± 0.0
3.544MetSer: 3.544 ± 0.0
1.611MetThr: 1.611 ± 0.0
0.644MetVal: 0.644 ± 0.0
0.0MetTrp: 0.0 ± 0.0
0.644MetTyr: 0.644 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.933AsnAla: 1.933 ± 0.0
0.322AsnCys: 0.322 ± 0.0
2.577AsnAsp: 2.577 ± 0.0
2.255AsnGlu: 2.255 ± 0.0
2.577AsnPhe: 2.577 ± 0.0
2.899AsnGly: 2.899 ± 0.0
0.322AsnHis: 0.322 ± 0.0
0.644AsnIle: 0.644 ± 0.0
2.255AsnLys: 2.255 ± 0.0
2.577AsnLeu: 2.577 ± 0.0
1.289AsnMet: 1.289 ± 0.0
1.289AsnAsn: 1.289 ± 0.0
2.255AsnPro: 2.255 ± 0.0
1.289AsnGln: 1.289 ± 0.0
1.933AsnArg: 1.933 ± 0.0
2.255AsnSer: 2.255 ± 0.0
0.644AsnThr: 0.644 ± 0.0
5.799AsnVal: 5.799 ± 0.0
0.966AsnTrp: 0.966 ± 0.0
0.644AsnTyr: 0.644 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
2.577ProAla: 2.577 ± 0.0
1.289ProCys: 1.289 ± 0.0
2.577ProAsp: 2.577 ± 0.0
4.832ProGlu: 4.832 ± 0.0
1.611ProPhe: 1.611 ± 0.0
2.255ProGly: 2.255 ± 0.0
0.966ProHis: 0.966 ± 0.0
2.255ProIle: 2.255 ± 0.0
2.899ProLys: 2.899 ± 0.0
4.832ProLeu: 4.832 ± 0.0
1.611ProMet: 1.611 ± 0.0
0.966ProAsn: 0.966 ± 0.0
1.289ProPro: 1.289 ± 0.0
1.611ProGln: 1.611 ± 0.0
1.933ProArg: 1.933 ± 0.0
3.544ProSer: 3.544 ± 0.0
3.222ProThr: 3.222 ± 0.0
3.544ProVal: 3.544 ± 0.0
0.644ProTrp: 0.644 ± 0.0
2.255ProTyr: 2.255 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.222GlnAla: 3.222 ± 0.0
0.322GlnCys: 0.322 ± 0.0
2.255GlnAsp: 2.255 ± 0.0
1.611GlnGlu: 1.611 ± 0.0
2.899GlnPhe: 2.899 ± 0.0
2.899GlnGly: 2.899 ± 0.0
1.289GlnHis: 1.289 ± 0.0
3.222GlnIle: 3.222 ± 0.0
3.222GlnLys: 3.222 ± 0.0
3.544GlnLeu: 3.544 ± 0.0
1.289GlnMet: 1.289 ± 0.0
1.289GlnAsn: 1.289 ± 0.0
1.933GlnPro: 1.933 ± 0.0
2.255GlnGln: 2.255 ± 0.0
2.577GlnArg: 2.577 ± 0.0
1.611GlnSer: 1.611 ± 0.0
1.289GlnThr: 1.289 ± 0.0
2.899GlnVal: 2.899 ± 0.0
0.644GlnTrp: 0.644 ± 0.0
2.577GlnTyr: 2.577 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
5.799ArgAla: 5.799 ± 0.0
2.255ArgCys: 2.255 ± 0.0
3.222ArgAsp: 3.222 ± 0.0
4.188ArgGlu: 4.188 ± 0.0
4.188ArgPhe: 4.188 ± 0.0
3.222ArgGly: 3.222 ± 0.0
1.289ArgHis: 1.289 ± 0.0
3.222ArgIle: 3.222 ± 0.0
1.933ArgLys: 1.933 ± 0.0
7.088ArgLeu: 7.088 ± 0.0
3.222ArgMet: 3.222 ± 0.0
1.611ArgAsn: 1.611 ± 0.0
2.577ArgPro: 2.577 ± 0.0
3.222ArgGln: 3.222 ± 0.0
6.443ArgArg: 6.443 ± 0.0
3.544ArgSer: 3.544 ± 0.0
2.899ArgThr: 2.899 ± 0.0
4.188ArgVal: 4.188 ± 0.0
1.289ArgTrp: 1.289 ± 0.0
2.899ArgTyr: 2.899 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
4.188SerAla: 4.188 ± 0.0
2.255SerCys: 2.255 ± 0.0
5.477SerAsp: 5.477 ± 0.0
3.544SerGlu: 3.544 ± 0.0
3.222SerPhe: 3.222 ± 0.0
2.577SerGly: 2.577 ± 0.0
0.644SerHis: 0.644 ± 0.0
1.611SerIle: 1.611 ± 0.0
2.899SerLys: 2.899 ± 0.0
6.121SerLeu: 6.121 ± 0.0
2.577SerMet: 2.577 ± 0.0
2.255SerAsn: 2.255 ± 0.0
3.222SerPro: 3.222 ± 0.0
1.611SerGln: 1.611 ± 0.0
4.188SerArg: 4.188 ± 0.0
5.477SerSer: 5.477 ± 0.0
2.255SerThr: 2.255 ± 0.0
3.222SerVal: 3.222 ± 0.0
1.611SerTrp: 1.611 ± 0.0
1.933SerTyr: 1.933 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
3.866ThrAla: 3.866 ± 0.0
0.644ThrCys: 0.644 ± 0.0
1.289ThrAsp: 1.289 ± 0.0
2.899ThrGlu: 2.899 ± 0.0
2.577ThrPhe: 2.577 ± 0.0
2.577ThrGly: 2.577 ± 0.0
0.644ThrHis: 0.644 ± 0.0
2.255ThrIle: 2.255 ± 0.0
1.611ThrLys: 1.611 ± 0.0
3.222ThrLeu: 3.222 ± 0.0
1.289ThrMet: 1.289 ± 0.0
3.222ThrAsn: 3.222 ± 0.0
2.899ThrPro: 2.899 ± 0.0
1.933ThrGln: 1.933 ± 0.0
3.544ThrArg: 3.544 ± 0.0
2.577ThrSer: 2.577 ± 0.0
5.477ThrThr: 5.477 ± 0.0
3.544ThrVal: 3.544 ± 0.0
1.289ThrTrp: 1.289 ± 0.0
2.899ThrTyr: 2.899 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
5.155ValAla: 5.155 ± 0.0
1.289ValCys: 1.289 ± 0.0
5.799ValAsp: 5.799 ± 0.0
5.477ValGlu: 5.477 ± 0.0
3.222ValPhe: 3.222 ± 0.0
3.222ValGly: 3.222 ± 0.0
1.289ValHis: 1.289 ± 0.0
2.255ValIle: 2.255 ± 0.0
2.899ValLys: 2.899 ± 0.0
5.799ValLeu: 5.799 ± 0.0
1.611ValMet: 1.611 ± 0.0
2.255ValAsn: 2.255 ± 0.0
3.544ValPro: 3.544 ± 0.0
3.222ValGln: 3.222 ± 0.0
6.121ValArg: 6.121 ± 0.0
4.188ValSer: 4.188 ± 0.0
3.866ValThr: 3.866 ± 0.0
2.577ValVal: 2.577 ± 0.0
1.289ValTrp: 1.289 ± 0.0
2.255ValTyr: 2.255 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.644TrpAla: 0.644 ± 0.0
1.289TrpCys: 1.289 ± 0.0
0.644TrpAsp: 0.644 ± 0.0
2.899TrpGlu: 2.899 ± 0.0
0.644TrpPhe: 0.644 ± 0.0
0.322TrpGly: 0.322 ± 0.0
1.289TrpHis: 1.289 ± 0.0
1.289TrpIle: 1.289 ± 0.0
1.611TrpLys: 1.611 ± 0.0
1.289TrpLeu: 1.289 ± 0.0
0.322TrpMet: 0.322 ± 0.0
0.644TrpAsn: 0.644 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.966TrpGln: 0.966 ± 0.0
2.577TrpArg: 2.577 ± 0.0
1.289TrpSer: 1.289 ± 0.0
0.966TrpThr: 0.966 ± 0.0
0.966TrpVal: 0.966 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.322TrpTyr: 0.322 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
0.966TyrAla: 0.966 ± 0.0
1.289TyrCys: 1.289 ± 0.0
2.899TyrAsp: 2.899 ± 0.0
0.322TyrGlu: 0.322 ± 0.0
1.933TyrPhe: 1.933 ± 0.0
1.289TyrGly: 1.289 ± 0.0
0.644TyrHis: 0.644 ± 0.0
2.899TyrIle: 2.899 ± 0.0
1.289TyrLys: 1.289 ± 0.0
2.577TyrLeu: 2.577 ± 0.0
1.611TyrMet: 1.611 ± 0.0
1.289TyrAsn: 1.289 ± 0.0
1.933TyrPro: 1.933 ± 0.0
0.966TyrGln: 0.966 ± 0.0
3.544TyrArg: 3.544 ± 0.0
2.255TyrSer: 2.255 ± 0.0
1.289TyrThr: 1.289 ± 0.0
2.899TyrVal: 2.899 ± 0.0
0.966TyrTrp: 0.966 ± 0.0
2.255TyrTyr: 2.255 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (3105 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski