Brevundimonas sp.

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas; unclassified Brevundimonas

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2819 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A519IVU7|A0A519IVU7_9CAUL Uncharacterized protein OS=Brevundimonas sp. OX=1871086 GN=EON91_12070 PE=4 SV=1
MM1 pKa = 7.56RR2 pKa = 11.84RR3 pKa = 11.84YY4 pKa = 10.85LMALGAASLICIAPAAASAQSRR26 pKa = 11.84IAVGDD31 pKa = 3.97TVDD34 pKa = 3.43GALDD38 pKa = 3.54ARR40 pKa = 11.84DD41 pKa = 3.81ARR43 pKa = 11.84LGDD46 pKa = 3.58DD47 pKa = 4.45SYY49 pKa = 12.0YY50 pKa = 11.11DD51 pKa = 3.87CYY53 pKa = 11.06LLRR56 pKa = 11.84IDD58 pKa = 5.0RR59 pKa = 11.84PQSVAITLKK68 pKa = 10.72SSAFDD73 pKa = 3.46AYY75 pKa = 10.79LGAGHH80 pKa = 7.11GVTCGGEE87 pKa = 3.78AAEE90 pKa = 4.72TNDD93 pKa = 4.99DD94 pKa = 4.16GPSMGTDD101 pKa = 2.78SYY103 pKa = 11.75LALEE107 pKa = 5.01LGQGEE112 pKa = 4.55YY113 pKa = 10.45FIRR116 pKa = 11.84ANSLSADD123 pKa = 3.23KK124 pKa = 10.86TGGYY128 pKa = 7.14TLSIAPIQGGSDD140 pKa = 3.67DD141 pKa = 4.5NVTTLEE147 pKa = 4.13GRR149 pKa = 11.84LGQDD153 pKa = 3.42DD154 pKa = 4.59RR155 pKa = 11.84KK156 pKa = 10.53LADD159 pKa = 3.44GSYY162 pKa = 9.77YY163 pKa = 10.95DD164 pKa = 4.13CVDD167 pKa = 2.8VRR169 pKa = 11.84GRR171 pKa = 11.84EE172 pKa = 4.34GQQLTAGMEE181 pKa = 4.14SEE183 pKa = 6.06DD184 pKa = 3.91FDD186 pKa = 3.97TYY188 pKa = 11.44LAILEE193 pKa = 4.55GGGCQGSSLGTNDD206 pKa = 5.43DD207 pKa = 3.95GDD209 pKa = 4.42DD210 pKa = 4.18LGTDD214 pKa = 3.2SLLAVTLPSDD224 pKa = 3.59GVYY227 pKa = 10.43SIRR230 pKa = 11.84ANSLSANQTGAYY242 pKa = 8.63LLHH245 pKa = 6.52YY246 pKa = 10.64ALDD249 pKa = 3.75

Molecular weight: 25.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2D8ID82|A0A2D8ID82_9CAUL Acyl carrier protein OS=Brevundimonas sp. OX=1871086 GN=acpP PE=3 SV=1
MM1 pKa = 7.35KK2 pKa = 9.4RR3 pKa = 11.84TYY5 pKa = 10.2QPSRR9 pKa = 11.84LVRR12 pKa = 11.84KK13 pKa = 8.99RR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.7GFRR19 pKa = 11.84SRR21 pKa = 11.84MATKK25 pKa = 10.2NGQKK29 pKa = 9.53IVARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.77GRR39 pKa = 11.84KK40 pKa = 9.04RR41 pKa = 11.84LTAA44 pKa = 4.18

Molecular weight: 5.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2819

0

2819

847357

30

1629

300.6

32.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.96 ± 0.074

0.71 ± 0.011

6.137 ± 0.037

5.514 ± 0.042

3.402 ± 0.026

9.073 ± 0.046

1.793 ± 0.022

4.398 ± 0.031

2.697 ± 0.04

9.876 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.344 ± 0.021

2.287 ± 0.024

5.442 ± 0.034

3.169 ± 0.027

7.612 ± 0.049

4.914 ± 0.033

5.434 ± 0.036

7.712 ± 0.034

1.474 ± 0.021

2.053 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski