Amino acid dipepetide frequency for Beihai zhaovirus-like virus 3

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
5.272AlaAla: 5.272 ± 0.0
0.0AlaCys: 0.0 ± 0.0
1.757AlaAsp: 1.757 ± 0.0
2.343AlaGlu: 2.343 ± 0.0
2.343AlaPhe: 2.343 ± 0.0
2.929AlaGly: 2.929 ± 0.0
1.172AlaHis: 1.172 ± 0.0
3.515AlaIle: 3.515 ± 0.0
2.929AlaLys: 2.929 ± 0.0
7.616AlaLeu: 7.616 ± 0.0
0.586AlaMet: 0.586 ± 0.0
4.687AlaAsn: 4.687 ± 0.0
3.515AlaPro: 3.515 ± 0.0
1.757AlaGln: 1.757 ± 0.0
5.858AlaArg: 5.858 ± 0.0
2.343AlaSer: 2.343 ± 0.0
2.929AlaThr: 2.929 ± 0.0
5.858AlaVal: 5.858 ± 0.0
1.172AlaTrp: 1.172 ± 0.0
1.757AlaTyr: 1.757 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.172CysAla: 1.172 ± 0.0
0.0CysCys: 0.0 ± 0.0
1.172CysAsp: 1.172 ± 0.0
0.586CysGlu: 0.586 ± 0.0
1.172CysPhe: 1.172 ± 0.0
1.172CysGly: 1.172 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.586CysIle: 0.586 ± 0.0
0.0CysLys: 0.0 ± 0.0
0.586CysLeu: 0.586 ± 0.0
2.343CysMet: 2.343 ± 0.0
1.172CysAsn: 1.172 ± 0.0
0.586CysPro: 0.586 ± 0.0
1.172CysGln: 1.172 ± 0.0
1.172CysArg: 1.172 ± 0.0
1.172CysSer: 1.172 ± 0.0
0.586CysThr: 0.586 ± 0.0
1.757CysVal: 1.757 ± 0.0
0.0CysTrp: 0.0 ± 0.0
1.757CysTyr: 1.757 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
4.687AspAla: 4.687 ± 0.0
1.757AspCys: 1.757 ± 0.0
5.272AspAsp: 5.272 ± 0.0
2.929AspGlu: 2.929 ± 0.0
2.343AspPhe: 2.343 ± 0.0
2.343AspGly: 2.343 ± 0.0
1.757AspHis: 1.757 ± 0.0
1.757AspIle: 1.757 ± 0.0
1.172AspLys: 1.172 ± 0.0
4.101AspLeu: 4.101 ± 0.0
3.515AspMet: 3.515 ± 0.0
2.343AspAsn: 2.343 ± 0.0
1.757AspPro: 1.757 ± 0.0
5.272AspGln: 5.272 ± 0.0
2.929AspArg: 2.929 ± 0.0
3.515AspSer: 3.515 ± 0.0
2.343AspThr: 2.343 ± 0.0
4.101AspVal: 4.101 ± 0.0
1.172AspTrp: 1.172 ± 0.0
4.687AspTyr: 4.687 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
1.757GluAla: 1.757 ± 0.0
0.586GluCys: 0.586 ± 0.0
2.929GluAsp: 2.929 ± 0.0
5.858GluGlu: 5.858 ± 0.0
4.101GluPhe: 4.101 ± 0.0
2.929GluGly: 2.929 ± 0.0
2.343GluHis: 2.343 ± 0.0
4.101GluIle: 4.101 ± 0.0
2.929GluLys: 2.929 ± 0.0
4.101GluLeu: 4.101 ± 0.0
1.757GluMet: 1.757 ± 0.0
2.929GluAsn: 2.929 ± 0.0
2.343GluPro: 2.343 ± 0.0
2.343GluGln: 2.343 ± 0.0
3.515GluArg: 3.515 ± 0.0
4.101GluSer: 4.101 ± 0.0
2.343GluThr: 2.343 ± 0.0
5.858GluVal: 5.858 ± 0.0
1.172GluTrp: 1.172 ± 0.0
1.757GluTyr: 1.757 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.929PheAla: 2.929 ± 0.0
1.172PheCys: 1.172 ± 0.0
3.515PheAsp: 3.515 ± 0.0
1.172PheGlu: 1.172 ± 0.0
1.172PhePhe: 1.172 ± 0.0
1.172PheGly: 1.172 ± 0.0
1.172PheHis: 1.172 ± 0.0
0.586PheIle: 0.586 ± 0.0
2.929PheLys: 2.929 ± 0.0
2.343PheLeu: 2.343 ± 0.0
0.586PheMet: 0.586 ± 0.0
2.343PheAsn: 2.343 ± 0.0
1.172PhePro: 1.172 ± 0.0
2.929PheGln: 2.929 ± 0.0
2.929PheArg: 2.929 ± 0.0
3.515PheSer: 3.515 ± 0.0
1.757PheThr: 1.757 ± 0.0
3.515PheVal: 3.515 ± 0.0
0.586PheTrp: 0.586 ± 0.0
1.172PheTyr: 1.172 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
3.515GlyAla: 3.515 ± 0.0
2.343GlyCys: 2.343 ± 0.0
1.757GlyAsp: 1.757 ± 0.0
1.172GlyGlu: 1.172 ± 0.0
2.343GlyPhe: 2.343 ± 0.0
2.343GlyGly: 2.343 ± 0.0
1.172GlyHis: 1.172 ± 0.0
2.929GlyIle: 2.929 ± 0.0
4.101GlyLys: 4.101 ± 0.0
8.202GlyLeu: 8.202 ± 0.0
1.757GlyMet: 1.757 ± 0.0
0.586GlyAsn: 0.586 ± 0.0
3.515GlyPro: 3.515 ± 0.0
2.929GlyGln: 2.929 ± 0.0
2.343GlyArg: 2.343 ± 0.0
3.515GlySer: 3.515 ± 0.0
4.687GlyThr: 4.687 ± 0.0
3.515GlyVal: 3.515 ± 0.0
0.586GlyTrp: 0.586 ± 0.0
1.757GlyTyr: 1.757 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
3.515HisAla: 3.515 ± 0.0
0.0HisCys: 0.0 ± 0.0
0.0HisAsp: 0.0 ± 0.0
1.172HisGlu: 1.172 ± 0.0
0.586HisPhe: 0.586 ± 0.0
0.0HisGly: 0.0 ± 0.0
0.0HisHis: 0.0 ± 0.0
2.929HisIle: 2.929 ± 0.0
1.172HisLys: 1.172 ± 0.0
2.929HisLeu: 2.929 ± 0.0
0.0HisMet: 0.0 ± 0.0
0.586HisAsn: 0.586 ± 0.0
3.515HisPro: 3.515 ± 0.0
1.172HisGln: 1.172 ± 0.0
0.0HisArg: 0.0 ± 0.0
1.172HisSer: 1.172 ± 0.0
0.586HisThr: 0.586 ± 0.0
2.343HisVal: 2.343 ± 0.0
0.586HisTrp: 0.586 ± 0.0
0.586HisTyr: 0.586 ± 0.0
0.586HisXaa: 0.586 ± 0.0
Ile
1.757IleAla: 1.757 ± 0.0
1.172IleCys: 1.172 ± 0.0
4.687IleAsp: 4.687 ± 0.0
2.343IleGlu: 2.343 ± 0.0
1.172IlePhe: 1.172 ± 0.0
6.444IleGly: 6.444 ± 0.0
0.0IleHis: 0.0 ± 0.0
1.757IleIle: 1.757 ± 0.0
2.929IleLys: 2.929 ± 0.0
2.929IleLeu: 2.929 ± 0.0
1.757IleMet: 1.757 ± 0.0
3.515IleAsn: 3.515 ± 0.0
2.343IlePro: 2.343 ± 0.0
4.687IleGln: 4.687 ± 0.0
2.929IleArg: 2.929 ± 0.0
7.03IleSer: 7.03 ± 0.0
1.757IleThr: 1.757 ± 0.0
3.515IleVal: 3.515 ± 0.0
1.172IleTrp: 1.172 ± 0.0
2.343IleTyr: 2.343 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
4.687LysAla: 4.687 ± 0.0
1.757LysCys: 1.757 ± 0.0
4.101LysAsp: 4.101 ± 0.0
6.444LysGlu: 6.444 ± 0.0
1.757LysPhe: 1.757 ± 0.0
2.343LysGly: 2.343 ± 0.0
0.586LysHis: 0.586 ± 0.0
2.929LysIle: 2.929 ± 0.0
11.131LysLys: 11.131 ± 0.0
3.515LysLeu: 3.515 ± 0.0
2.343LysMet: 2.343 ± 0.0
2.929LysAsn: 2.929 ± 0.0
2.343LysPro: 2.343 ± 0.0
5.858LysGln: 5.858 ± 0.0
0.586LysArg: 0.586 ± 0.0
4.101LysSer: 4.101 ± 0.0
1.172LysThr: 1.172 ± 0.0
2.343LysVal: 2.343 ± 0.0
1.172LysTrp: 1.172 ± 0.0
5.858LysTyr: 5.858 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
3.515LeuAla: 3.515 ± 0.0
1.757LeuCys: 1.757 ± 0.0
5.272LeuAsp: 5.272 ± 0.0
6.444LeuGlu: 6.444 ± 0.0
5.858LeuPhe: 5.858 ± 0.0
4.101LeuGly: 4.101 ± 0.0
1.172LeuHis: 1.172 ± 0.0
4.101LeuIle: 4.101 ± 0.0
7.616LeuLys: 7.616 ± 0.0
7.03LeuLeu: 7.03 ± 0.0
2.343LeuMet: 2.343 ± 0.0
4.687LeuAsn: 4.687 ± 0.0
4.101LeuPro: 4.101 ± 0.0
3.515LeuGln: 3.515 ± 0.0
1.757LeuArg: 1.757 ± 0.0
6.444LeuSer: 6.444 ± 0.0
4.101LeuThr: 4.101 ± 0.0
4.101LeuVal: 4.101 ± 0.0
1.172LeuTrp: 1.172 ± 0.0
4.101LeuTyr: 4.101 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.343MetAla: 2.343 ± 0.0
0.586MetCys: 0.586 ± 0.0
2.929MetAsp: 2.929 ± 0.0
1.757MetGlu: 1.757 ± 0.0
0.0MetPhe: 0.0 ± 0.0
2.343MetGly: 2.343 ± 0.0
0.0MetHis: 0.0 ± 0.0
1.757MetIle: 1.757 ± 0.0
2.343MetLys: 2.343 ± 0.0
1.757MetLeu: 1.757 ± 0.0
1.172MetMet: 1.172 ± 0.0
1.757MetAsn: 1.757 ± 0.0
0.586MetPro: 0.586 ± 0.0
1.172MetGln: 1.172 ± 0.0
1.172MetArg: 1.172 ± 0.0
1.172MetSer: 1.172 ± 0.0
2.343MetThr: 2.343 ± 0.0
2.343MetVal: 2.343 ± 0.0
0.0MetTrp: 0.0 ± 0.0
3.515MetTyr: 3.515 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.172AsnAla: 1.172 ± 0.0
0.586AsnCys: 0.586 ± 0.0
0.586AsnAsp: 0.586 ± 0.0
2.929AsnGlu: 2.929 ± 0.0
3.515AsnPhe: 3.515 ± 0.0
5.272AsnGly: 5.272 ± 0.0
2.343AsnHis: 2.343 ± 0.0
3.515AsnIle: 3.515 ± 0.0
3.515AsnLys: 3.515 ± 0.0
5.272AsnLeu: 5.272 ± 0.0
0.586AsnMet: 0.586 ± 0.0
4.687AsnAsn: 4.687 ± 0.0
2.343AsnPro: 2.343 ± 0.0
1.757AsnGln: 1.757 ± 0.0
4.101AsnArg: 4.101 ± 0.0
2.929AsnSer: 2.929 ± 0.0
2.343AsnThr: 2.343 ± 0.0
2.343AsnVal: 2.343 ± 0.0
1.172AsnTrp: 1.172 ± 0.0
1.757AsnTyr: 1.757 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
3.515ProAla: 3.515 ± 0.0
1.172ProCys: 1.172 ± 0.0
4.687ProAsp: 4.687 ± 0.0
2.343ProGlu: 2.343 ± 0.0
3.515ProPhe: 3.515 ± 0.0
2.343ProGly: 2.343 ± 0.0
1.172ProHis: 1.172 ± 0.0
1.757ProIle: 1.757 ± 0.0
2.929ProLys: 2.929 ± 0.0
4.687ProLeu: 4.687 ± 0.0
1.172ProMet: 1.172 ± 0.0
2.343ProAsn: 2.343 ± 0.0
0.586ProPro: 0.586 ± 0.0
0.586ProGln: 0.586 ± 0.0
3.515ProArg: 3.515 ± 0.0
4.101ProSer: 4.101 ± 0.0
2.343ProThr: 2.343 ± 0.0
1.757ProVal: 1.757 ± 0.0
0.0ProTrp: 0.0 ± 0.0
1.172ProTyr: 1.172 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
4.101GlnAla: 4.101 ± 0.0
0.0GlnCys: 0.0 ± 0.0
1.757GlnAsp: 1.757 ± 0.0
4.101GlnGlu: 4.101 ± 0.0
1.757GlnPhe: 1.757 ± 0.0
3.515GlnGly: 3.515 ± 0.0
1.757GlnHis: 1.757 ± 0.0
6.444GlnIle: 6.444 ± 0.0
2.929GlnLys: 2.929 ± 0.0
5.272GlnLeu: 5.272 ± 0.0
1.172GlnMet: 1.172 ± 0.0
4.101GlnAsn: 4.101 ± 0.0
1.757GlnPro: 1.757 ± 0.0
1.757GlnGln: 1.757 ± 0.0
1.172GlnArg: 1.172 ± 0.0
2.343GlnSer: 2.343 ± 0.0
0.586GlnThr: 0.586 ± 0.0
2.929GlnVal: 2.929 ± 0.0
0.586GlnTrp: 0.586 ± 0.0
2.929GlnTyr: 2.929 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
1.172ArgAla: 1.172 ± 0.0
1.172ArgCys: 1.172 ± 0.0
6.444ArgAsp: 6.444 ± 0.0
5.272ArgGlu: 5.272 ± 0.0
1.757ArgPhe: 1.757 ± 0.0
3.515ArgGly: 3.515 ± 0.0
0.586ArgHis: 0.586 ± 0.0
4.687ArgIle: 4.687 ± 0.0
2.929ArgLys: 2.929 ± 0.0
5.272ArgLeu: 5.272 ± 0.0
1.172ArgMet: 1.172 ± 0.0
0.586ArgAsn: 0.586 ± 0.0
3.515ArgPro: 3.515 ± 0.0
2.343ArgGln: 2.343 ± 0.0
1.172ArgArg: 1.172 ± 0.0
3.515ArgSer: 3.515 ± 0.0
3.515ArgThr: 3.515 ± 0.0
4.687ArgVal: 4.687 ± 0.0
0.0ArgTrp: 0.0 ± 0.0
2.929ArgTyr: 2.929 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.272SerAla: 5.272 ± 0.0
0.586SerCys: 0.586 ± 0.0
3.515SerAsp: 3.515 ± 0.0
2.929SerGlu: 2.929 ± 0.0
0.586SerPhe: 0.586 ± 0.0
4.101SerGly: 4.101 ± 0.0
1.172SerHis: 1.172 ± 0.0
2.929SerIle: 2.929 ± 0.0
6.444SerLys: 6.444 ± 0.0
4.687SerLeu: 4.687 ± 0.0
1.757SerMet: 1.757 ± 0.0
4.101SerAsn: 4.101 ± 0.0
2.343SerPro: 2.343 ± 0.0
1.172SerGln: 1.172 ± 0.0
7.616SerArg: 7.616 ± 0.0
5.272SerSer: 5.272 ± 0.0
1.172SerThr: 1.172 ± 0.0
8.202SerVal: 8.202 ± 0.0
1.172SerTrp: 1.172 ± 0.0
2.929SerTyr: 2.929 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
1.172ThrAla: 1.172 ± 0.0
0.0ThrCys: 0.0 ± 0.0
1.172ThrAsp: 1.172 ± 0.0
2.343ThrGlu: 2.343 ± 0.0
0.586ThrPhe: 0.586 ± 0.0
2.929ThrGly: 2.929 ± 0.0
1.172ThrHis: 1.172 ± 0.0
2.929ThrIle: 2.929 ± 0.0
0.586ThrLys: 0.586 ± 0.0
2.929ThrLeu: 2.929 ± 0.0
2.343ThrMet: 2.343 ± 0.0
4.687ThrAsn: 4.687 ± 0.0
2.343ThrPro: 2.343 ± 0.0
2.929ThrGln: 2.929 ± 0.0
4.101ThrArg: 4.101 ± 0.0
2.343ThrSer: 2.343 ± 0.0
1.757ThrThr: 1.757 ± 0.0
2.343ThrVal: 2.343 ± 0.0
0.586ThrTrp: 0.586 ± 0.0
1.172ThrTyr: 1.172 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
5.858ValAla: 5.858 ± 0.0
2.343ValCys: 2.343 ± 0.0
4.687ValAsp: 4.687 ± 0.0
4.101ValGlu: 4.101 ± 0.0
2.343ValPhe: 2.343 ± 0.0
4.101ValGly: 4.101 ± 0.0
1.757ValHis: 1.757 ± 0.0
4.687ValIle: 4.687 ± 0.0
4.687ValLys: 4.687 ± 0.0
6.444ValLeu: 6.444 ± 0.0
2.929ValMet: 2.929 ± 0.0
2.343ValAsn: 2.343 ± 0.0
4.101ValPro: 4.101 ± 0.0
4.101ValGln: 4.101 ± 0.0
4.687ValArg: 4.687 ± 0.0
5.858ValSer: 5.858 ± 0.0
0.586ValThr: 0.586 ± 0.0
5.858ValVal: 5.858 ± 0.0
1.172ValTrp: 1.172 ± 0.0
0.0ValTyr: 0.0 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.586TrpAla: 0.586 ± 0.0
0.0TrpCys: 0.0 ± 0.0
1.172TrpAsp: 1.172 ± 0.0
0.586TrpGlu: 0.586 ± 0.0
0.586TrpPhe: 0.586 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.586TrpHis: 0.586 ± 0.0
0.0TrpIle: 0.0 ± 0.0
0.586TrpLys: 0.586 ± 0.0
1.172TrpLeu: 1.172 ± 0.0
0.586TrpMet: 0.586 ± 0.0
1.757TrpAsn: 1.757 ± 0.0
0.586TrpPro: 0.586 ± 0.0
0.586TrpGln: 0.586 ± 0.0
1.172TrpArg: 1.172 ± 0.0
1.172TrpSer: 1.172 ± 0.0
2.343TrpThr: 2.343 ± 0.0
0.586TrpVal: 0.586 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.929TyrAla: 2.929 ± 0.0
1.172TyrCys: 1.172 ± 0.0
2.343TyrAsp: 2.343 ± 0.0
2.929TyrGlu: 2.929 ± 0.0
1.172TyrPhe: 1.172 ± 0.0
1.172TyrGly: 1.172 ± 0.0
3.515TyrHis: 3.515 ± 0.0
2.343TyrIle: 2.343 ± 0.0
4.101TyrLys: 4.101 ± 0.0
2.343TyrLeu: 2.343 ± 0.0
0.0TyrMet: 0.0 ± 0.0
0.586TyrAsn: 0.586 ± 0.0
2.343TyrPro: 2.343 ± 0.0
2.929TyrGln: 2.929 ± 0.0
3.515TyrArg: 3.515 ± 0.0
2.343TyrSer: 2.343 ± 0.0
1.172TyrThr: 1.172 ± 0.0
4.687TyrVal: 4.687 ± 0.0
0.586TyrTrp: 0.586 ± 0.0
2.929TyrTyr: 2.929 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.586XaaMet: 0.586 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (1708 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski