Avian metaavulavirus 7

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus

Average proteome isoelectric point is 5.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C6FGZ0|C6FGZ0_9MONO Hemagglutinin-neuraminidase OS=Avian metaavulavirus 7 OX=2560317 GN=HN PE=3 SV=1
MM1 pKa = 7.92RR2 pKa = 11.84VRR4 pKa = 11.84PLIIILVLLVLLWLNILPVIGLDD27 pKa = 3.34NSKK30 pKa = 9.92IAQAGIISAQEE41 pKa = 3.78YY42 pKa = 9.53AVNVYY47 pKa = 9.97SQSNEE52 pKa = 3.37AYY54 pKa = 8.7IALRR58 pKa = 11.84TVPYY62 pKa = 10.09IPPHH66 pKa = 6.01NLSCFQDD73 pKa = 4.53LINTYY78 pKa = 8.44NTTIQNIFSPIQDD91 pKa = 3.85QITSITSASTLPSSRR106 pKa = 11.84FAGLVVGAIALGVATSAQITAAVALTKK133 pKa = 10.39AQQNAQEE140 pKa = 4.53IIRR143 pKa = 11.84LRR145 pKa = 11.84DD146 pKa = 3.66SIQNTINAVNDD157 pKa = 3.24ITVGLSSIGVALSKK171 pKa = 10.05VQNYY175 pKa = 10.03LNDD178 pKa = 3.87VINPALQNLSCQVSALNLGIQLNLYY203 pKa = 8.18LTEE206 pKa = 3.8ITTIFGPQITNPSLTPLSIQALYY229 pKa = 9.57TLAGDD234 pKa = 4.04NLMQFLTRR242 pKa = 11.84YY243 pKa = 9.77GYY245 pKa = 11.41GEE247 pKa = 4.2TSVSSILEE255 pKa = 3.98SGLISAQIVSFDD267 pKa = 3.67KK268 pKa = 10.22QTGIAILYY276 pKa = 6.9VTLPSIATLSGSRR289 pKa = 11.84VTKK292 pKa = 10.54LMSVSVQTGVGEE304 pKa = 4.46GSAIVPSYY312 pKa = 10.7VIQQGTVIEE321 pKa = 4.24EE322 pKa = 4.64FIPDD326 pKa = 3.27SCIFTRR332 pKa = 11.84SDD334 pKa = 3.71VYY336 pKa = 10.36CTQLYY341 pKa = 10.78SKK343 pKa = 10.23LLPDD347 pKa = 5.99SILQCLQGSMADD359 pKa = 3.72CQFTRR364 pKa = 11.84SLGSFANRR372 pKa = 11.84FMTVAGGVIANCQTVLCRR390 pKa = 11.84CYY392 pKa = 10.24NPVMIIPQNNGIAVTLIDD410 pKa = 4.55GSLCKK415 pKa = 10.08EE416 pKa = 4.31LEE418 pKa = 4.17LEE420 pKa = 4.73GIRR423 pKa = 11.84LTMADD428 pKa = 4.18PVFASYY434 pKa = 11.11SRR436 pKa = 11.84DD437 pKa = 3.32LIINGNQFAPSDD449 pKa = 3.72ALDD452 pKa = 3.42ISSEE456 pKa = 4.02LGQLNNSISSATDD469 pKa = 3.24NLQKK473 pKa = 10.82AQEE476 pKa = 4.31SLNKK480 pKa = 10.31SIIPAATSSWLIILLFVLVSISLVIGCISIYY511 pKa = 10.44FIYY514 pKa = 10.23KK515 pKa = 9.93HH516 pKa = 5.42STTNRR521 pKa = 11.84SRR523 pKa = 11.84NLSSDD528 pKa = 3.76IISNPYY534 pKa = 8.26IQKK537 pKa = 10.92ANN539 pKa = 3.44

Molecular weight: 58.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C6FGY9|C6FGY9_9MONO Fusion glycoprotein F0 OS=Avian metaavulavirus 7 OX=2560317 GN=F PE=3 SV=1
MM1 pKa = 7.55EE2 pKa = 5.78SISLGLYY9 pKa = 9.82VDD11 pKa = 4.54EE12 pKa = 5.46SDD14 pKa = 4.18PACSLLAFPIIMQTTSEE31 pKa = 4.29GKK33 pKa = 10.02KK34 pKa = 9.74VLQPQVRR41 pKa = 11.84INRR44 pKa = 11.84LGSISIEE51 pKa = 3.93GVRR54 pKa = 11.84AMFINTYY61 pKa = 10.31GFIEE65 pKa = 4.12EE66 pKa = 4.75RR67 pKa = 11.84PTEE70 pKa = 3.96RR71 pKa = 11.84TGFFQPGEE79 pKa = 4.15KK80 pKa = 9.96NQQQVVTAGMLTLGQIRR97 pKa = 11.84TNIDD101 pKa = 2.97PDD103 pKa = 4.21EE104 pKa = 5.55IGEE107 pKa = 4.14ACLRR111 pKa = 11.84LKK113 pKa = 11.14VNAKK117 pKa = 9.85KK118 pKa = 10.48SAASEE123 pKa = 4.05EE124 pKa = 4.43KK125 pKa = 9.97IVFSILEE132 pKa = 4.22KK133 pKa = 10.69PPALMTAPVVQDD145 pKa = 3.17GGLIAKK151 pKa = 10.21AEE153 pKa = 4.14GSIKK157 pKa = 10.68CPGKK161 pKa = 9.95MMSEE165 pKa = 3.29IHH167 pKa = 5.82YY168 pKa = 9.01SFRR171 pKa = 11.84VMFVSITMLDD181 pKa = 3.48NQSLYY186 pKa = 10.4RR187 pKa = 11.84VPTAISSFKK196 pKa = 11.01NKK198 pKa = 10.1ALYY201 pKa = 10.27SIQLEE206 pKa = 4.29VLLEE210 pKa = 4.03VDD212 pKa = 4.68VKK214 pKa = 11.12PEE216 pKa = 3.87SPQCKK221 pKa = 9.41FLADD225 pKa = 3.52QKK227 pKa = 9.68GKK229 pKa = 10.51KK230 pKa = 8.37VASVWFHH237 pKa = 6.27LCNSKK242 pKa = 8.46KK243 pKa = 9.2TNASGKK249 pKa = 8.92PRR251 pKa = 11.84SLEE254 pKa = 3.85DD255 pKa = 3.06MRR257 pKa = 11.84KK258 pKa = 9.26KK259 pKa = 10.5VRR261 pKa = 11.84DD262 pKa = 3.42MGIKK266 pKa = 10.28VSLADD271 pKa = 3.48LWGPTIIVRR280 pKa = 11.84ATGKK284 pKa = 8.8MSKK287 pKa = 10.81YY288 pKa = 9.09MLGFFSTSGTSCHH301 pKa = 6.37PVTKK305 pKa = 10.45SSPDD309 pKa = 3.17LAKK312 pKa = 10.48ILWSCSSTIIKK323 pKa = 10.42ANAIVQGSVKK333 pKa = 10.16VDD335 pKa = 3.22VLTLEE340 pKa = 5.2DD341 pKa = 3.68IQVSSAAKK349 pKa = 9.59INKK352 pKa = 9.67SGIGKK357 pKa = 9.13FNPFKK362 pKa = 10.81KK363 pKa = 10.52

Molecular weight: 39.81 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

4555

363

2227

759.2

84.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.828 ± 0.742

1.932 ± 0.36

4.83 ± 0.413

4.632 ± 0.416

3.403 ± 0.435

5.423 ± 0.383

1.361 ± 0.292

8.518 ± 0.793

5.005 ± 0.836

11.416 ± 0.725

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.261 ± 0.353

5.049 ± 0.486

4.479 ± 0.386

5.357 ± 0.619

4.193 ± 0.537

8.957 ± 0.603

6.213 ± 0.433

5.884 ± 0.393

1.076 ± 0.237

3.183 ± 0.505
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski