Sanxia water strider virus 16
Average proteome isoelectric point is 8.8
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1L3KGD1|A0A1L3KGD1_9VIRU RNA replicase OS=Sanxia water strider virus 16 OX=1923400 PE=3 SV=1
MM1 pKa = 6.82 STNVNDD7 pKa = 4.08 NQDD10 pKa = 3.7 DD11 pKa = 3.96 VPRR14 pKa = 11.84 TSKK17 pKa = 10.43 ISNLFHH23 pKa = 6.8 KK24 pKa = 8.36 TRR26 pKa = 11.84 PSKK29 pKa = 11.07 YY30 pKa = 8.91 RR31 pKa = 11.84 VTPQKK36 pKa = 10.15 PGVIKK41 pKa = 10.47 RR42 pKa = 11.84 FARR45 pKa = 11.84 KK46 pKa = 8.77 LHH48 pKa = 5.67 YY49 pKa = 10.36 EE50 pKa = 4.59 FIKK53 pKa = 10.7 KK54 pKa = 9.07 SVRR57 pKa = 11.84 KK58 pKa = 9.28 VSKK61 pKa = 10.38 AIEE64 pKa = 3.87 NRR66 pKa = 11.84 IVRR69 pKa = 11.84 SADD72 pKa = 2.92 LRR74 pKa = 11.84 RR75 pKa = 11.84 VIDD78 pKa = 3.6 HH79 pKa = 7.62 KK80 pKa = 11.18 IRR82 pKa = 11.84 DD83 pKa = 3.7 IPLLRR88 pKa = 11.84 SSIGHH93 pKa = 5.43 THH95 pKa = 6.96 PNCAGEE101 pKa = 4.27 RR102 pKa = 11.84 TAVTLFMQEE111 pKa = 3.99 LAKK114 pKa = 10.52 QCAYY118 pKa = 10.8 DD119 pKa = 4.04 PYY121 pKa = 8.58 TVSMSSPDD129 pKa = 3.33 QLNAEE134 pKa = 4.12 EE135 pKa = 4.44 GSRR138 pKa = 11.84 YY139 pKa = 9.45 FFWAKK144 pKa = 10.75 DD145 pKa = 3.4 FAQEE149 pKa = 4.68 MRR151 pKa = 11.84 DD152 pKa = 3.88 DD153 pKa = 4.85 PIKK156 pKa = 11.13 ANSLLIFTDD165 pKa = 3.05 VDD167 pKa = 3.67 FHH169 pKa = 9.55 VDD171 pKa = 3.08 MNKK174 pKa = 9.1 YY175 pKa = 10.77 LKK177 pKa = 9.57 MFKK180 pKa = 10.4 PMLIYY185 pKa = 10.31 TIVPTSAGHH194 pKa = 6.02 RR195 pKa = 11.84 EE196 pKa = 3.85 EE197 pKa = 3.88 EE198 pKa = 3.91 FEE200 pKa = 5.83 YY201 pKa = 10.71 FFKK204 pKa = 10.85 DD205 pKa = 3.24 NKK207 pKa = 9.78 IHH209 pKa = 6.2 YY210 pKa = 8.41 KK211 pKa = 10.16 VSGGSDD217 pKa = 3.52 YY218 pKa = 11.29 CHH220 pKa = 6.77 QIWDD224 pKa = 3.8 YY225 pKa = 11.0 KK226 pKa = 10.56 GDD228 pKa = 3.53 VVTVVDD234 pKa = 3.96 KK235 pKa = 11.5 NKK237 pKa = 10.43 NLLCYY242 pKa = 10.29 HH243 pKa = 6.69 ITQHH247 pKa = 6.2 ALKK250 pKa = 9.74 SSPHH254 pKa = 5.83 RR255 pKa = 11.84 RR256 pKa = 11.84 VISILPFASVPYY268 pKa = 9.46 PYY270 pKa = 10.57 YY271 pKa = 10.78 EE272 pKa = 5.37 NIPQQPLVRR281 pKa = 11.84 KK282 pKa = 7.42 TYY284 pKa = 10.2 NSNGVSFIDD293 pKa = 3.55 STLDD297 pKa = 3.58 DD298 pKa = 5.12 SISLALEE305 pKa = 3.99 GSIEE309 pKa = 4.21 SVRR312 pKa = 11.84 IRR314 pKa = 11.84 RR315 pKa = 11.84 KK316 pKa = 8.1 MLEE319 pKa = 4.08 AIKK322 pKa = 10.41 IRR324 pKa = 11.84 MGTSNVLEE332 pKa = 4.25 KK333 pKa = 10.78 PGDD336 pKa = 3.78 VEE338 pKa = 4.29 FMLYY342 pKa = 8.31 KK343 pKa = 10.41 TSGDD347 pKa = 3.7 KK348 pKa = 11.09 ADD350 pKa = 3.77 VAIDD354 pKa = 3.45 SCLLFEE360 pKa = 4.22 ILKK363 pKa = 9.95 RR364 pKa = 11.84 QAVMTNNVVATTSIATHH381 pKa = 5.24 YY382 pKa = 10.52 QPVGPLVHH390 pKa = 6.97 EE391 pKa = 4.37 EE392 pKa = 4.14 VKK394 pKa = 10.99 DD395 pKa = 3.77 PSQLITSPLVTKK407 pKa = 9.95 PALFPAQTYY416 pKa = 8.15 NAEE419 pKa = 3.93 VAAISGRR426 pKa = 11.84 VDD428 pKa = 2.99 KK429 pKa = 10.74 PRR431 pKa = 11.84 NDD433 pKa = 3.1 VKK435 pKa = 10.92 MPLAYY440 pKa = 9.94 QNYY443 pKa = 7.84 GRR445 pKa = 11.84 EE446 pKa = 4.26 FAKK449 pKa = 10.9 LMIPDD454 pKa = 3.86 NKK456 pKa = 9.46 IHH458 pKa = 6.42 QGRR461 pKa = 11.84 PITIAEE467 pKa = 4.26 VKK469 pKa = 10.17 HH470 pKa = 5.51 LQNKK474 pKa = 7.84 PMQRR478 pKa = 11.84 ARR480 pKa = 11.84 TRR482 pKa = 11.84 EE483 pKa = 3.85 IEE485 pKa = 4.01 HH486 pKa = 6.92 LIGVEE491 pKa = 3.83 PRR493 pKa = 11.84 NKK495 pKa = 9.9 LRR497 pKa = 11.84 SFIKK501 pKa = 10.61 NEE503 pKa = 4.1 AYY505 pKa = 10.04 SAPNDD510 pKa = 3.44 PRR512 pKa = 11.84 VITTNAAALTLRR524 pKa = 11.84 MSAFTYY530 pKa = 9.78 AAKK533 pKa = 10.51 EE534 pKa = 4.09 DD535 pKa = 4.06 FLKK538 pKa = 10.54 KK539 pKa = 10.52 CPFYY543 pKa = 11.34 GPGKK547 pKa = 10.14 APRR550 pKa = 11.84 EE551 pKa = 3.58 IHH553 pKa = 6.82 DD554 pKa = 3.59 RR555 pKa = 11.84 MRR557 pKa = 11.84 EE558 pKa = 3.72 FGEE561 pKa = 4.05 EE562 pKa = 4.27 GFVITDD568 pKa = 3.07 YY569 pKa = 11.55 NRR571 pKa = 11.84 FDD573 pKa = 3.72 GSISRR578 pKa = 11.84 ALQQLVNKK586 pKa = 10.18 IYY588 pKa = 10.72 LRR590 pKa = 11.84 WLNDD594 pKa = 3.18 GSDD597 pKa = 3.7 ADD599 pKa = 3.39 EE600 pKa = 4.0 WAAMFRR606 pKa = 11.84 QVFIQRR612 pKa = 11.84 AFTKK616 pKa = 10.09 KK617 pKa = 10.28 GYY619 pKa = 10.58 AYY621 pKa = 10.37 DD622 pKa = 3.78 PGYY625 pKa = 9.02 GTRR628 pKa = 11.84 SGSPITTDD636 pKa = 2.9 GNTMINAFISYY647 pKa = 9.86 CALRR651 pKa = 11.84 DD652 pKa = 3.11 MGFPVEE658 pKa = 4.32 EE659 pKa = 4.21 AWSKK663 pKa = 10.98 LGLYY667 pKa = 9.5 TGDD670 pKa = 4.55 DD671 pKa = 3.65 GLNRR675 pKa = 11.84 NIPGMAAAMTAAVAAMGLNIDD696 pKa = 4.4 IAQTLPDD703 pKa = 3.85 EE704 pKa = 5.26 SITFAGRR711 pKa = 11.84 TFPRR715 pKa = 11.84 PMTSYY720 pKa = 10.49 TSHH723 pKa = 7.08 QDD725 pKa = 2.96 IKK727 pKa = 10.34 RR728 pKa = 11.84 TLPKK732 pKa = 10.54 LHH734 pKa = 6.17 VSSNKK739 pKa = 10.12 SVTPEE744 pKa = 2.94 IAAYY748 pKa = 10.0 NRR750 pKa = 11.84 AAGYY754 pKa = 10.04 YY755 pKa = 8.44 VTDD758 pKa = 3.09 ARR760 pKa = 11.84 TPLVGTWARR769 pKa = 11.84 KK770 pKa = 9.67 VLVNCKK776 pKa = 9.92 KK777 pKa = 10.47 IKK779 pKa = 10.28 LVEE782 pKa = 4.65 DD783 pKa = 3.28 NAEE786 pKa = 3.96 NLEE789 pKa = 4.11 ALLANSMTSEE799 pKa = 4.05 EE800 pKa = 4.16 RR801 pKa = 11.84 FKK803 pKa = 10.71 IANGSWPQDD812 pKa = 3.35 NPEE815 pKa = 5.23 LIRR818 pKa = 11.84 QSVADD823 pKa = 4.09 ILNITNNEE831 pKa = 3.97 LNQLEE836 pKa = 4.5 LQIQAAEE843 pKa = 4.45 DD844 pKa = 3.59 LHH846 pKa = 6.88 KK847 pKa = 11.25 LPVVWDD853 pKa = 3.52 NTDD856 pKa = 3.0 EE857 pKa = 4.5 FKK859 pKa = 11.0 PKK861 pKa = 9.21 LTSLVNGEE869 pKa = 4.36 LLRR872 pKa = 11.84 PHH874 pKa = 6.79 VKK876 pKa = 10.22 SEE878 pKa = 3.91 PCKK881 pKa = 10.31 TEE883 pKa = 3.92 SKK885 pKa = 8.67 PTNNSSTPQPQTGSIPKK902 pKa = 9.45 AAKK905 pKa = 8.96 TSSGKK910 pKa = 7.5 STKK913 pKa = 9.94 SAPKK917 pKa = 9.63 PKK919 pKa = 9.83 PSNKK923 pKa = 9.14 KK924 pKa = 9.8 AQASSQAQTKK934 pKa = 8.87 TKK936 pKa = 9.44 LTASPNSSGPASSTSKK952 pKa = 10.53 SRR954 pKa = 11.84 APNRR958 pKa = 11.84 NDD960 pKa = 3.24 NATSAPNAKK969 pKa = 9.81 PNVAEE974 pKa = 4.49 PSPPPKK980 pKa = 9.85 RR981 pKa = 11.84 KK982 pKa = 8.45 KK983 pKa = 8.45 TQLQEE988 pKa = 3.88 VTEE991 pKa = 4.22 LLKK994 pKa = 10.98 KK995 pKa = 10.59 LNPSLTDD1002 pKa = 3.41 HH1003 pKa = 5.73 QVKK1006 pKa = 8.27 TLIEE1010 pKa = 4.38 NNNPRR1015 pKa = 11.84 QEE1017 pKa = 4.05 RR1018 pKa = 11.84 YY1019 pKa = 9.73
Molecular weight: 114.52 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.797
IPC2_protein 8.756
IPC_protein 8.624
Toseland 9.414
ProMoST 9.194
Dawson 9.692
Bjellqvist 9.399
Wikipedia 9.853
Rodwell 10.014
Grimsley 9.765
Solomon 9.706
Lehninger 9.663
Nozaki 9.502
DTASelect 9.37
Thurlkill 9.531
EMBOSS 9.853
Sillero 9.633
Patrickios 5.041
IPC_peptide 9.706
IPC2_peptide 7.907
IPC2.peptide.svr19 7.837
Protein with the highest isoelectric point:
>tr|A0A1L3KGD1|A0A1L3KGD1_9VIRU RNA replicase OS=Sanxia water strider virus 16 OX=1923400 PE=3 SV=1
MM1 pKa = 6.82 STNVNDD7 pKa = 4.08 NQDD10 pKa = 3.7 DD11 pKa = 3.96 VPRR14 pKa = 11.84 TSKK17 pKa = 10.43 ISNLFHH23 pKa = 6.8 KK24 pKa = 8.36 TRR26 pKa = 11.84 PSKK29 pKa = 11.07 YY30 pKa = 8.91 RR31 pKa = 11.84 VTPQKK36 pKa = 10.15 PGVIKK41 pKa = 10.47 RR42 pKa = 11.84 FARR45 pKa = 11.84 KK46 pKa = 8.77 LHH48 pKa = 5.67 YY49 pKa = 10.36 EE50 pKa = 4.59 FIKK53 pKa = 10.7 KK54 pKa = 9.07 SVRR57 pKa = 11.84 KK58 pKa = 9.28 VSKK61 pKa = 10.38 AIEE64 pKa = 3.87 NRR66 pKa = 11.84 IVRR69 pKa = 11.84 SADD72 pKa = 2.92 LRR74 pKa = 11.84 RR75 pKa = 11.84 VIDD78 pKa = 3.6 HH79 pKa = 7.62 KK80 pKa = 11.18 IRR82 pKa = 11.84 DD83 pKa = 3.7 IPLLRR88 pKa = 11.84 SSIGHH93 pKa = 5.43 THH95 pKa = 6.96 PNCAGEE101 pKa = 4.27 RR102 pKa = 11.84 TAVTLFMQEE111 pKa = 3.99 LAKK114 pKa = 10.52 QCAYY118 pKa = 10.8 DD119 pKa = 4.04 PYY121 pKa = 8.58 TVSMSSPDD129 pKa = 3.33 QLNAEE134 pKa = 4.12 EE135 pKa = 4.44 GSRR138 pKa = 11.84 YY139 pKa = 9.45 FFWAKK144 pKa = 10.75 DD145 pKa = 3.4 FAQEE149 pKa = 4.68 MRR151 pKa = 11.84 DD152 pKa = 3.88 DD153 pKa = 4.85 PIKK156 pKa = 11.13 ANSLLIFTDD165 pKa = 3.05 VDD167 pKa = 3.67 FHH169 pKa = 9.55 VDD171 pKa = 3.08 MNKK174 pKa = 9.1 YY175 pKa = 10.77 LKK177 pKa = 9.57 MFKK180 pKa = 10.4 PMLIYY185 pKa = 10.31 TIVPTSAGHH194 pKa = 6.02 RR195 pKa = 11.84 EE196 pKa = 3.85 EE197 pKa = 3.88 EE198 pKa = 3.91 FEE200 pKa = 5.83 YY201 pKa = 10.71 FFKK204 pKa = 10.85 DD205 pKa = 3.24 NKK207 pKa = 9.78 IHH209 pKa = 6.2 YY210 pKa = 8.41 KK211 pKa = 10.16 VSGGSDD217 pKa = 3.52 YY218 pKa = 11.29 CHH220 pKa = 6.77 QIWDD224 pKa = 3.8 YY225 pKa = 11.0 KK226 pKa = 10.56 GDD228 pKa = 3.53 VVTVVDD234 pKa = 3.96 KK235 pKa = 11.5 NKK237 pKa = 10.43 NLLCYY242 pKa = 10.29 HH243 pKa = 6.69 ITQHH247 pKa = 6.2 ALKK250 pKa = 9.74 SSPHH254 pKa = 5.83 RR255 pKa = 11.84 RR256 pKa = 11.84 VISILPFASVPYY268 pKa = 9.46 PYY270 pKa = 10.57 YY271 pKa = 10.78 EE272 pKa = 5.37 NIPQQPLVRR281 pKa = 11.84 KK282 pKa = 7.42 TYY284 pKa = 10.2 NSNGVSFIDD293 pKa = 3.55 STLDD297 pKa = 3.58 DD298 pKa = 5.12 SISLALEE305 pKa = 3.99 GSIEE309 pKa = 4.21 SVRR312 pKa = 11.84 IRR314 pKa = 11.84 RR315 pKa = 11.84 KK316 pKa = 8.1 MLEE319 pKa = 4.08 AIKK322 pKa = 10.41 IRR324 pKa = 11.84 MGTSNVLEE332 pKa = 4.25 KK333 pKa = 10.78 PGDD336 pKa = 3.78 VEE338 pKa = 4.29 FMLYY342 pKa = 8.31 KK343 pKa = 10.41 TSGDD347 pKa = 3.7 KK348 pKa = 11.09 ADD350 pKa = 3.77 VAIDD354 pKa = 3.45 SCLLFEE360 pKa = 4.22 ILKK363 pKa = 9.95 RR364 pKa = 11.84 QAVMTNNVVATTSIATHH381 pKa = 5.24 YY382 pKa = 10.52 QPVGPLVHH390 pKa = 6.97 EE391 pKa = 4.37 EE392 pKa = 4.14 VKK394 pKa = 10.99 DD395 pKa = 3.77 PSQLITSPLVTKK407 pKa = 9.95 PALFPAQTYY416 pKa = 8.15 NAEE419 pKa = 3.93 VAAISGRR426 pKa = 11.84 VDD428 pKa = 2.99 KK429 pKa = 10.74 PRR431 pKa = 11.84 NDD433 pKa = 3.1 VKK435 pKa = 10.92 MPLAYY440 pKa = 9.94 QNYY443 pKa = 7.84 GRR445 pKa = 11.84 EE446 pKa = 4.26 FAKK449 pKa = 10.9 LMIPDD454 pKa = 3.86 NKK456 pKa = 9.46 IHH458 pKa = 6.42 QGRR461 pKa = 11.84 PITIAEE467 pKa = 4.26 VKK469 pKa = 10.17 HH470 pKa = 5.51 LQNKK474 pKa = 7.84 PMQRR478 pKa = 11.84 ARR480 pKa = 11.84 TRR482 pKa = 11.84 EE483 pKa = 3.85 IEE485 pKa = 4.01 HH486 pKa = 6.92 LIGVEE491 pKa = 3.83 PRR493 pKa = 11.84 NKK495 pKa = 9.9 LRR497 pKa = 11.84 SFIKK501 pKa = 10.61 NEE503 pKa = 4.1 AYY505 pKa = 10.04 SAPNDD510 pKa = 3.44 PRR512 pKa = 11.84 VITTNAAALTLRR524 pKa = 11.84 MSAFTYY530 pKa = 9.78 AAKK533 pKa = 10.51 EE534 pKa = 4.09 DD535 pKa = 4.06 FLKK538 pKa = 10.54 KK539 pKa = 10.52 CPFYY543 pKa = 11.34 GPGKK547 pKa = 10.14 APRR550 pKa = 11.84 EE551 pKa = 3.58 IHH553 pKa = 6.82 DD554 pKa = 3.59 RR555 pKa = 11.84 MRR557 pKa = 11.84 EE558 pKa = 3.72 FGEE561 pKa = 4.05 EE562 pKa = 4.27 GFVITDD568 pKa = 3.07 YY569 pKa = 11.55 NRR571 pKa = 11.84 FDD573 pKa = 3.72 GSISRR578 pKa = 11.84 ALQQLVNKK586 pKa = 10.18 IYY588 pKa = 10.72 LRR590 pKa = 11.84 WLNDD594 pKa = 3.18 GSDD597 pKa = 3.7 ADD599 pKa = 3.39 EE600 pKa = 4.0 WAAMFRR606 pKa = 11.84 QVFIQRR612 pKa = 11.84 AFTKK616 pKa = 10.09 KK617 pKa = 10.28 GYY619 pKa = 10.58 AYY621 pKa = 10.37 DD622 pKa = 3.78 PGYY625 pKa = 9.02 GTRR628 pKa = 11.84 SGSPITTDD636 pKa = 2.9 GNTMINAFISYY647 pKa = 9.86 CALRR651 pKa = 11.84 DD652 pKa = 3.11 MGFPVEE658 pKa = 4.32 EE659 pKa = 4.21 AWSKK663 pKa = 10.98 LGLYY667 pKa = 9.5 TGDD670 pKa = 4.55 DD671 pKa = 3.65 GLNRR675 pKa = 11.84 NIPGMAAAMTAAVAAMGLNIDD696 pKa = 4.4 IAQTLPDD703 pKa = 3.85 EE704 pKa = 5.26 SITFAGRR711 pKa = 11.84 TFPRR715 pKa = 11.84 PMTSYY720 pKa = 10.49 TSHH723 pKa = 7.08 QDD725 pKa = 2.96 IKK727 pKa = 10.34 RR728 pKa = 11.84 TLPKK732 pKa = 10.54 LHH734 pKa = 6.17 VSSNKK739 pKa = 10.12 SVTPEE744 pKa = 2.94 IAAYY748 pKa = 10.0 NRR750 pKa = 11.84 AAGYY754 pKa = 10.04 YY755 pKa = 8.44 VTDD758 pKa = 3.09 ARR760 pKa = 11.84 TPLVGTWARR769 pKa = 11.84 KK770 pKa = 9.67 VLVNCKK776 pKa = 9.92 KK777 pKa = 10.47 IKK779 pKa = 10.28 LVEE782 pKa = 4.65 DD783 pKa = 3.28 NAEE786 pKa = 3.96 NLEE789 pKa = 4.11 ALLANSMTSEE799 pKa = 4.05 EE800 pKa = 4.16 RR801 pKa = 11.84 FKK803 pKa = 10.71 IANGSWPQDD812 pKa = 3.35 NPEE815 pKa = 5.23 LIRR818 pKa = 11.84 QSVADD823 pKa = 4.09 ILNITNNEE831 pKa = 3.97 LNQLEE836 pKa = 4.5 LQIQAAEE843 pKa = 4.45 DD844 pKa = 3.59 LHH846 pKa = 6.88 KK847 pKa = 11.25 LPVVWDD853 pKa = 3.52 NTDD856 pKa = 3.0 EE857 pKa = 4.5 FKK859 pKa = 11.0 PKK861 pKa = 9.21 LTSLVNGEE869 pKa = 4.36 LLRR872 pKa = 11.84 PHH874 pKa = 6.79 VKK876 pKa = 10.22 SEE878 pKa = 3.91 PCKK881 pKa = 10.31 TEE883 pKa = 3.92 SKK885 pKa = 8.67 PTNNSSTPQPQTGSIPKK902 pKa = 9.45 AAKK905 pKa = 8.96 TSSGKK910 pKa = 7.5 STKK913 pKa = 9.94 SAPKK917 pKa = 9.63 PKK919 pKa = 9.83 PSNKK923 pKa = 9.14 KK924 pKa = 9.8 AQASSQAQTKK934 pKa = 8.87 TKK936 pKa = 9.44 LTASPNSSGPASSTSKK952 pKa = 10.53 SRR954 pKa = 11.84 APNRR958 pKa = 11.84 NDD960 pKa = 3.24 NATSAPNAKK969 pKa = 9.81 PNVAEE974 pKa = 4.49 PSPPPKK980 pKa = 9.85 RR981 pKa = 11.84 KK982 pKa = 8.45 KK983 pKa = 8.45 TQLQEE988 pKa = 3.88 VTEE991 pKa = 4.22 LLKK994 pKa = 10.98 KK995 pKa = 10.59 LNPSLTDD1002 pKa = 3.41 HH1003 pKa = 5.73 QVKK1006 pKa = 8.27 TLIEE1010 pKa = 4.38 NNNPRR1015 pKa = 11.84 QEE1017 pKa = 4.05 RR1018 pKa = 11.84 YY1019 pKa = 9.73
Molecular weight: 114.52 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.797
IPC2_protein 8.756
IPC_protein 8.624
Toseland 9.414
ProMoST 9.194
Dawson 9.692
Bjellqvist 9.399
Wikipedia 9.853
Rodwell 10.014
Grimsley 9.765
Solomon 9.706
Lehninger 9.663
Nozaki 9.502
DTASelect 9.37
Thurlkill 9.531
EMBOSS 9.853
Sillero 9.633
Patrickios 5.041
IPC_peptide 9.706
IPC2_peptide 7.907
IPC2.peptide.svr19 7.837
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
1
0
1
1019
1019
1019
1019.0
114.52
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.145 ± 0.0
0.883 ± 0.0
5.397 ± 0.0
5.397 ± 0.0
3.435 ± 0.0
4.22 ± 0.0
2.257 ± 0.0
5.888 ± 0.0
7.949 ± 0.0
7.262 ± 0.0
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.355 ± 0.0
6.084 ± 0.0
6.771 ± 0.0
3.729 ± 0.0
5.888 ± 0.0
7.655 ± 0.0
6.575 ± 0.0
5.79 ± 0.0
0.785 ± 0.0
3.533 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here