Xenotropic MuLV-related virus (isolate VP62) (XMRV)
Average proteome isoelectric point is 7.56
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>sp|Q27ID9|GAG_XMRV6 Gag polyprotein OS=Xenotropic MuLV-related virus (isolate VP62) OX=373193 GN=gag PE=3 SV=1
MM1 pKa = 7.73 EE2 pKa = 5.31 SPAFSKK8 pKa = 10.39 PLKK11 pKa = 10.57 DD12 pKa = 5.53 KK13 pKa = 10.82 INPWGPLIIMGILVRR28 pKa = 11.84 AGASVQRR35 pKa = 11.84 DD36 pKa = 3.54 SPHH39 pKa = 5.86 QVFNVTWKK47 pKa = 8.64 ITNLMTGQTANATSLLGTMTDD68 pKa = 3.99 TFPKK72 pKa = 10.35 LYY74 pKa = 10.38 FDD76 pKa = 4.59 LCDD79 pKa = 3.72 LVGDD83 pKa = 3.97 NWDD86 pKa = 4.43 DD87 pKa = 3.87 PEE89 pKa = 6.13 PDD91 pKa = 3.37 IGDD94 pKa = 3.85 GCRR97 pKa = 11.84 SPGGRR102 pKa = 11.84 KK103 pKa = 7.51 RR104 pKa = 11.84 TRR106 pKa = 11.84 LYY108 pKa = 11.12 DD109 pKa = 3.94 FYY111 pKa = 11.12 VCPGHH116 pKa = 6.65 TVLTGCGGPRR126 pKa = 11.84 EE127 pKa = 4.67 GYY129 pKa = 8.94 CGKK132 pKa = 9.42 WGCEE136 pKa = 4.2 TTGQAYY142 pKa = 7.85 WKK144 pKa = 9.81 PSSSWDD150 pKa = 3.87 LISLKK155 pKa = 10.5 RR156 pKa = 11.84 GNTPKK161 pKa = 10.94 GQGPCFDD168 pKa = 4.2 SSVGSGSIQGATPGGRR184 pKa = 11.84 CNPLVLEE191 pKa = 4.44 FTDD194 pKa = 3.35 AGKK197 pKa = 10.18 RR198 pKa = 11.84 ASWDD202 pKa = 3.48 APKK205 pKa = 9.56 TWGLRR210 pKa = 11.84 LYY212 pKa = 10.08 RR213 pKa = 11.84 STGADD218 pKa = 3.13 PVTLFSLTRR227 pKa = 11.84 QVLNVGPRR235 pKa = 11.84 VPIGPNPVITEE246 pKa = 4.01 QLPPSQPVQIMLPRR260 pKa = 11.84 TPRR263 pKa = 11.84 PPPSGAASMVPGAPPPSQQPGTGDD287 pKa = 3.12 RR288 pKa = 11.84 LLNLVEE294 pKa = 4.24 GAYY297 pKa = 10.44 LALNLTSPDD306 pKa = 3.19 KK307 pKa = 10.78 TQEE310 pKa = 3.72 CWLCLVSGPPYY321 pKa = 9.43 YY322 pKa = 10.56 EE323 pKa = 4.09 GVAVLGTYY331 pKa = 10.48 SNHH334 pKa = 5.33 TSAPANCSVTSQHH347 pKa = 6.82 KK348 pKa = 8.87 LTLSEE353 pKa = 4.03 VTGQGLCIGAVPKK366 pKa = 9.12 THH368 pKa = 6.7 QALCNTTQKK377 pKa = 9.79 TSDD380 pKa = 3.03 GSYY383 pKa = 10.8 YY384 pKa = 10.45 LASPAGTIWACSTGLTPCLSTTVLNLTTDD413 pKa = 3.47 YY414 pKa = 11.13 CVLVEE419 pKa = 4.62 LWPKK423 pKa = 8.46 VTYY426 pKa = 10.35 HH427 pKa = 6.17 SPNYY431 pKa = 10.36 VYY433 pKa = 10.98 GQFEE437 pKa = 4.68 KK438 pKa = 9.06 KK439 pKa = 8.47 TKK441 pKa = 9.86 YY442 pKa = 9.84 KK443 pKa = 10.46 RR444 pKa = 11.84 EE445 pKa = 4.09 PVSLTLALLLGGLTMGGIAAGVGTGTTALVATKK478 pKa = 10.23 QFEE481 pKa = 4.16 QLQAAIHH488 pKa = 6.26 TDD490 pKa = 3.59 LGALEE495 pKa = 4.57 KK496 pKa = 10.8 SVSALEE502 pKa = 4.19 KK503 pKa = 10.73 SLTSLSEE510 pKa = 3.93 VVLQNRR516 pKa = 11.84 RR517 pKa = 11.84 GLDD520 pKa = 3.43 LLFLKK525 pKa = 10.78 EE526 pKa = 4.35 GGLCAALKK534 pKa = 10.07 EE535 pKa = 4.46 EE536 pKa = 4.39 CCFYY540 pKa = 11.27 ADD542 pKa = 3.26 HH543 pKa = 6.76 TGVVRR548 pKa = 11.84 DD549 pKa = 3.77 SMAKK553 pKa = 9.9 LRR555 pKa = 11.84 EE556 pKa = 4.05 RR557 pKa = 11.84 LNQRR561 pKa = 11.84 QKK563 pKa = 11.1 LFEE566 pKa = 4.62 SGQGWFEE573 pKa = 3.94 GLFNRR578 pKa = 11.84 SPWFTTLISTIMGPLIVLLLILLFGPCILNRR609 pKa = 11.84 LVQFVKK615 pKa = 10.71 DD616 pKa = 4.27 RR617 pKa = 11.84 ISVVQALVLTQQYY630 pKa = 9.46 HH631 pKa = 4.18 QLKK634 pKa = 10.48 SIDD637 pKa = 3.74 PEE639 pKa = 4.15 EE640 pKa = 4.44 VEE642 pKa = 4.67 SRR644 pKa = 11.84 EE645 pKa = 4.09
Molecular weight: 69.88 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 7.018
IPC2_protein 7.278
IPC_protein 7.088
Toseland 6.678
ProMoST 7.658
Dawson 7.79
Bjellqvist 8.273
Wikipedia 7.688
Rodwell 7.805
Grimsley 6.707
Solomon 7.819
Lehninger 7.849
Nozaki 8.565
DTASelect 7.951
Thurlkill 7.995
EMBOSS 8.009
Sillero 8.375
Patrickios 3.973
IPC_peptide 7.819
IPC2_peptide 7.468
IPC2.peptide.svr19 7.346
Protein with the highest isoelectric point:
>sp|Q27ID8|ENV_XMRV6 Envelope glycoprotein OS=Xenotropic MuLV-related virus (isolate VP62) OX=373193 GN=env PE=3 SV=1
MM1 pKa = 7.1 GQTVTTPLSLTLQHH15 pKa = 6.6 WGDD18 pKa = 3.71 VQRR21 pKa = 11.84 IASNQSVDD29 pKa = 3.29 VKK31 pKa = 10.46 KK32 pKa = 10.79 RR33 pKa = 11.84 RR34 pKa = 11.84 WVTFCSAEE42 pKa = 3.76 WPTFNVGWPQDD53 pKa = 3.48 GTFNLGVISQVKK65 pKa = 10.22 SRR67 pKa = 11.84 VFCPGPHH74 pKa = 5.94 GHH76 pKa = 7.63 PDD78 pKa = 3.33 QVPYY82 pKa = 10.54 IVTWEE87 pKa = 3.97 ALAYY91 pKa = 9.56 DD92 pKa = 4.46 PPPWVKK98 pKa = 10.3 PFVSPKK104 pKa = 10.1 PPPLPTAPVLPPGPSAQPPSRR125 pKa = 11.84 SALYY129 pKa = 9.0 PALTPSIKK137 pKa = 10.42 SKK139 pKa = 10.34 PPKK142 pKa = 9.76 PQVLPDD148 pKa = 3.57 SGGPLIDD155 pKa = 5.85 LLTEE159 pKa = 4.39 DD160 pKa = 4.77 PPPYY164 pKa = 9.88 GAQPSSSARR173 pKa = 11.84 EE174 pKa = 4.03 NNEE177 pKa = 3.34 EE178 pKa = 3.81 EE179 pKa = 4.12 AATTSEE185 pKa = 4.23 VSPPSPMVSRR195 pKa = 11.84 LRR197 pKa = 11.84 GRR199 pKa = 11.84 RR200 pKa = 11.84 DD201 pKa = 3.1 PPAADD206 pKa = 3.4 STTSQAFPLRR216 pKa = 11.84 MGGDD220 pKa = 3.4 GQLQYY225 pKa = 10.77 WPFSSSDD232 pKa = 3.25 LYY234 pKa = 10.91 NWKK237 pKa = 10.26 NNNPSFSEE245 pKa = 4.33 DD246 pKa = 3.41 PGKK249 pKa = 9.2 LTALIEE255 pKa = 4.54 SVLITHH261 pKa = 6.21 QPTWDD266 pKa = 3.87 DD267 pKa = 3.76 CQQLLGTLLTGEE279 pKa = 4.21 EE280 pKa = 4.14 KK281 pKa = 10.63 QRR283 pKa = 11.84 VLLEE287 pKa = 3.51 ARR289 pKa = 11.84 KK290 pKa = 9.33 AVRR293 pKa = 11.84 GNDD296 pKa = 3.42 GRR298 pKa = 11.84 PTQLPNEE305 pKa = 4.21 VNAAFPLEE313 pKa = 4.28 RR314 pKa = 11.84 PDD316 pKa = 3.02 WDD318 pKa = 3.64 YY319 pKa = 8.08 TTTEE323 pKa = 4.02 GRR325 pKa = 11.84 NHH327 pKa = 6.37 LVLYY331 pKa = 10.18 RR332 pKa = 11.84 QLLLAGLQNAGRR344 pKa = 11.84 SPTNLAKK351 pKa = 10.83 VKK353 pKa = 10.75 GITQGPNEE361 pKa = 4.46 SPSAFLEE368 pKa = 4.13 RR369 pKa = 11.84 LKK371 pKa = 10.64 EE372 pKa = 3.76 AYY374 pKa = 9.47 RR375 pKa = 11.84 RR376 pKa = 11.84 YY377 pKa = 8.42 TPYY380 pKa = 10.97 DD381 pKa = 3.58 PEE383 pKa = 6.44 DD384 pKa = 4.16 PGQEE388 pKa = 4.42 TNVSMSFIWQSAPDD402 pKa = 3.43 IGRR405 pKa = 11.84 KK406 pKa = 8.53 LEE408 pKa = 3.97 RR409 pKa = 11.84 LEE411 pKa = 4.17 DD412 pKa = 3.97 LKK414 pKa = 11.54 SKK416 pKa = 9.29 TLGDD420 pKa = 3.86 LVRR423 pKa = 11.84 EE424 pKa = 4.22 AEE426 pKa = 4.21 KK427 pKa = 10.61 IFNKK431 pKa = 10.33 RR432 pKa = 11.84 EE433 pKa = 3.98 TPEE436 pKa = 3.71 EE437 pKa = 3.83 RR438 pKa = 11.84 EE439 pKa = 3.51 EE440 pKa = 4.22 RR441 pKa = 11.84 IRR443 pKa = 11.84 RR444 pKa = 11.84 EE445 pKa = 3.71 IEE447 pKa = 3.66 EE448 pKa = 3.98 KK449 pKa = 10.04 EE450 pKa = 3.91 EE451 pKa = 3.66 RR452 pKa = 11.84 RR453 pKa = 11.84 RR454 pKa = 11.84 AEE456 pKa = 3.76 DD457 pKa = 3.29 EE458 pKa = 3.69 QRR460 pKa = 11.84 EE461 pKa = 4.23 RR462 pKa = 11.84 EE463 pKa = 3.9 RR464 pKa = 11.84 DD465 pKa = 3.34 RR466 pKa = 11.84 RR467 pKa = 11.84 RR468 pKa = 11.84 HH469 pKa = 5.55 RR470 pKa = 11.84 EE471 pKa = 3.66 MSKK474 pKa = 10.84 LLATVVIGQRR484 pKa = 11.84 QDD486 pKa = 2.97 RR487 pKa = 11.84 QGGEE491 pKa = 3.6 RR492 pKa = 11.84 RR493 pKa = 11.84 RR494 pKa = 11.84 PQLDD498 pKa = 3.28 KK499 pKa = 11.24 DD500 pKa = 3.28 QCAYY504 pKa = 10.62 CKK506 pKa = 10.63 EE507 pKa = 4.11 KK508 pKa = 10.86 GHH510 pKa = 6.17 WAKK513 pKa = 10.83 DD514 pKa = 3.72 CPKK517 pKa = 10.22 KK518 pKa = 10.42 PRR520 pKa = 11.84 GPRR523 pKa = 11.84 GPRR526 pKa = 11.84 PQTSLLTLGDD536 pKa = 3.33 XGGQGQEE543 pKa = 4.4 PPPEE547 pKa = 3.78 PRR549 pKa = 11.84 ITLKK553 pKa = 11.11 VGGQPVTFLVDD564 pKa = 3.16 TGAQHH569 pKa = 7.13 SVLTQNPGPLSDD581 pKa = 3.39 KK582 pKa = 10.73 SAWVQGATGGKK593 pKa = 8.85 RR594 pKa = 11.84 YY595 pKa = 9.89 RR596 pKa = 11.84 WTTDD600 pKa = 2.75 RR601 pKa = 11.84 KK602 pKa = 9.61 VHH604 pKa = 6.13 LATGKK609 pKa = 8.1 VTHH612 pKa = 6.64 SFLHH616 pKa = 6.51 VPDD619 pKa = 4.52 CPYY622 pKa = 10.89 PLLGRR627 pKa = 11.84 DD628 pKa = 4.07 LLTKK632 pKa = 10.64 LKK634 pKa = 10.75 AQIHH638 pKa = 5.72 FEE640 pKa = 4.04 GSGAQVVGPMGQPLQVLTLNIEE662 pKa = 4.02 DD663 pKa = 4.64 EE664 pKa = 4.5 YY665 pKa = 11.46 RR666 pKa = 11.84 LHH668 pKa = 5.99 EE669 pKa = 4.25 TSKK672 pKa = 11.14 EE673 pKa = 3.75 PDD675 pKa = 3.38 VPLGSTWLSDD685 pKa = 4.57 FPQAWAEE692 pKa = 4.06 TGGMGLAVRR701 pKa = 11.84 QAPLIIPLKK710 pKa = 9.29 ATSTPVSIKK719 pKa = 10.03 QYY721 pKa = 10.61 PMSQEE726 pKa = 3.37 ARR728 pKa = 11.84 LGIKK732 pKa = 9.24 PHH734 pKa = 5.44 IQRR737 pKa = 11.84 LLDD740 pKa = 3.38 QGILVPCQSPWNTPLLPVKK759 pKa = 10.68 KK760 pKa = 9.81 PGTNDD765 pKa = 3.17 YY766 pKa = 11.18 RR767 pKa = 11.84 PVQDD771 pKa = 3.5 LRR773 pKa = 11.84 EE774 pKa = 4.04 VNKK777 pKa = 10.22 RR778 pKa = 11.84 VEE780 pKa = 5.02 DD781 pKa = 3.41 IHH783 pKa = 6.25 PTVPNPYY790 pKa = 9.47 NLLSGLPPSHH800 pKa = 5.79 QWYY803 pKa = 7.85 TVLDD807 pKa = 3.94 LKK809 pKa = 11.24 DD810 pKa = 4.16 AFFCLRR816 pKa = 11.84 LHH818 pKa = 6.45 PTSQPLFAFEE828 pKa = 3.95 WRR830 pKa = 11.84 DD831 pKa = 3.39 PEE833 pKa = 4.17 MGISGQLTWTRR844 pKa = 11.84 LPQGFKK850 pKa = 10.77 NSPTLFDD857 pKa = 3.72 EE858 pKa = 4.73 ALHH861 pKa = 7.05 RR862 pKa = 11.84 DD863 pKa = 3.38 LADD866 pKa = 4.01 FRR868 pKa = 11.84 IQHH871 pKa = 7.14 PDD873 pKa = 3.8 LILLQYY879 pKa = 11.08 VDD881 pKa = 5.47 DD882 pKa = 5.09 LLLAATSEE890 pKa = 4.26 QDD892 pKa = 3.46 CQRR895 pKa = 11.84 GTRR898 pKa = 11.84 ALLQTLGNLGYY909 pKa = 10.19 RR910 pKa = 11.84 ASAKK914 pKa = 9.94 KK915 pKa = 10.33 AQICQKK921 pKa = 7.66 QVKK924 pKa = 9.11 YY925 pKa = 10.66 LGYY928 pKa = 10.3 LLKK931 pKa = 10.66 EE932 pKa = 4.07 GQRR935 pKa = 11.84 WLTEE939 pKa = 3.81 ARR941 pKa = 11.84 KK942 pKa = 7.75 EE943 pKa = 4.33 TVMGQPTPKK952 pKa = 9.8 TPRR955 pKa = 11.84 QLRR958 pKa = 11.84 EE959 pKa = 3.78 FLGTAGFCRR968 pKa = 11.84 LWIPGFAEE976 pKa = 4.05 MAAPLYY982 pKa = 9.89 PLTKK986 pKa = 10.16 TGTLFNWGPDD996 pKa = 3.31 QQKK999 pKa = 10.6 AYY1001 pKa = 10.79 QEE1003 pKa = 4.12 IKK1005 pKa = 10.24 QALLTAPALGLPDD1018 pKa = 3.35 LTKK1021 pKa = 10.54 PFEE1024 pKa = 4.23 LFVDD1028 pKa = 4.7 EE1029 pKa = 4.44 KK1030 pKa = 10.77 QGYY1033 pKa = 8.73 AKK1035 pKa = 10.55 GVLTQKK1041 pKa = 10.05 LGPWRR1046 pKa = 11.84 RR1047 pKa = 11.84 PVAYY1051 pKa = 10.02 LSKK1054 pKa = 10.96 KK1055 pKa = 9.63 LDD1057 pKa = 3.6 PVAAGWPPCLRR1068 pKa = 11.84 MVAAIAVLTKK1078 pKa = 10.7 DD1079 pKa = 3.26 AGKK1082 pKa = 8.92 LTMGQPLVILAPHH1095 pKa = 6.18 AVEE1098 pKa = 5.25 ALVKK1102 pKa = 10.23 QPPDD1106 pKa = 2.82 RR1107 pKa = 11.84 WLSNARR1113 pKa = 11.84 MTHH1116 pKa = 4.55 YY1117 pKa = 10.58 QAMLLDD1123 pKa = 3.66 TDD1125 pKa = 4.39 RR1126 pKa = 11.84 VQFGPVVALNPATLLPLPEE1145 pKa = 5.73 KK1146 pKa = 10.04 EE1147 pKa = 4.69 APHH1150 pKa = 6.97 DD1151 pKa = 3.72 CLEE1154 pKa = 4.44 ILAEE1158 pKa = 4.22 THH1160 pKa = 5.23 GTRR1163 pKa = 11.84 PDD1165 pKa = 3.55 LTDD1168 pKa = 3.51 QPIPDD1173 pKa = 5.05 ADD1175 pKa = 4.04 YY1176 pKa = 9.14 TWYY1179 pKa = 9.81 TDD1181 pKa = 3.1 GSSFLQEE1188 pKa = 3.9 GQRR1191 pKa = 11.84 RR1192 pKa = 11.84 AGAAVTTEE1200 pKa = 4.32 TEE1202 pKa = 4.64 VIWARR1207 pKa = 11.84 ALPAGTSAQRR1217 pKa = 11.84 AEE1219 pKa = 5.09 LIALTQALKK1228 pKa = 9.76 MAEE1231 pKa = 4.1 GKK1233 pKa = 10.02 KK1234 pKa = 10.58 LNVYY1238 pKa = 9.13 TDD1240 pKa = 2.85 SRR1242 pKa = 11.84 YY1243 pKa = 10.73 AFATAHH1249 pKa = 4.72 VHH1251 pKa = 5.13 GEE1253 pKa = 3.77 IYY1255 pKa = 10.19 RR1256 pKa = 11.84 RR1257 pKa = 11.84 RR1258 pKa = 11.84 GLLTSEE1264 pKa = 3.74 GRR1266 pKa = 11.84 EE1267 pKa = 3.52 IKK1269 pKa = 10.59 NKK1271 pKa = 10.52 NEE1273 pKa = 3.26 ILALLKK1279 pKa = 10.87 ALFLPKK1285 pKa = 9.86 RR1286 pKa = 11.84 LSIIHH1291 pKa = 6.52 CPGHH1295 pKa = 5.52 QKK1297 pKa = 10.76 GNSAEE1302 pKa = 3.95 ARR1304 pKa = 11.84 GNRR1307 pKa = 11.84 MADD1310 pKa = 3.15 QAARR1314 pKa = 11.84 EE1315 pKa = 4.08 AAMKK1319 pKa = 10.44 AVLEE1323 pKa = 4.23 TSTLLIEE1330 pKa = 5.61 DD1331 pKa = 4.12 STPYY1335 pKa = 9.73 TPPHH1339 pKa = 5.27 FHH1341 pKa = 5.93 YY1342 pKa = 9.99 TEE1344 pKa = 4.2 TDD1346 pKa = 3.27 LKK1348 pKa = 10.68 RR1349 pKa = 11.84 LRR1351 pKa = 11.84 EE1352 pKa = 4.02 LGATYY1357 pKa = 10.6 NQTKK1361 pKa = 10.07 GYY1363 pKa = 9.02 WVLQGKK1369 pKa = 8.23 PVMPDD1374 pKa = 2.88 QSVFEE1379 pKa = 4.89 LLDD1382 pKa = 3.51 SLHH1385 pKa = 6.99 RR1386 pKa = 11.84 LTHH1389 pKa = 6.89 LSPQKK1394 pKa = 10.27 MKK1396 pKa = 11.0 ALLDD1400 pKa = 3.97 RR1401 pKa = 11.84 EE1402 pKa = 3.98 EE1403 pKa = 4.37 SPYY1406 pKa = 11.73 YY1407 pKa = 9.61 MLNRR1411 pKa = 11.84 DD1412 pKa = 3.11 RR1413 pKa = 11.84 TIQYY1417 pKa = 7.96 VTEE1420 pKa = 4.17 TCTACAQVNASKK1432 pKa = 10.96 AKK1434 pKa = 8.64 IGAGVRR1440 pKa = 11.84 VRR1442 pKa = 11.84 GHH1444 pKa = 6.48 RR1445 pKa = 11.84 PGTHH1449 pKa = 5.81 WEE1451 pKa = 3.89 VDD1453 pKa = 3.94 FTEE1456 pKa = 4.65 VKK1458 pKa = 10.19 PGLYY1462 pKa = 9.83 GYY1464 pKa = 10.68 KK1465 pKa = 9.92 YY1466 pKa = 10.81 LLVFVDD1472 pKa = 4.62 TFSGWVEE1479 pKa = 3.8 AFPTKK1484 pKa = 10.49 RR1485 pKa = 11.84 EE1486 pKa = 3.91 TAKK1489 pKa = 10.67 VVSKK1493 pKa = 11.0 KK1494 pKa = 10.33 LLEE1497 pKa = 5.24 DD1498 pKa = 3.55 IFPRR1502 pKa = 11.84 FGMPQVLGSDD1512 pKa = 3.53 NGPAFASQVSQSVADD1527 pKa = 4.21 LLGIDD1532 pKa = 3.98 WKK1534 pKa = 10.15 LHH1536 pKa = 4.84 CAYY1539 pKa = 10.1 RR1540 pKa = 11.84 PQSSGQVEE1548 pKa = 4.26 RR1549 pKa = 11.84 MNRR1552 pKa = 11.84 TIKK1555 pKa = 9.53 EE1556 pKa = 4.35 TLTKK1560 pKa = 9.78 LTLASGTRR1568 pKa = 11.84 DD1569 pKa = 3.06 WVLLLPLALYY1579 pKa = 9.83 RR1580 pKa = 11.84 ARR1582 pKa = 11.84 NTPGPHH1588 pKa = 6.67 GLTPYY1593 pKa = 9.81 EE1594 pKa = 4.21 ILYY1597 pKa = 8.71 GAPPPLVNFHH1607 pKa = 7.0 DD1608 pKa = 4.32 PEE1610 pKa = 4.25 MSKK1613 pKa = 9.07 LTNSPSLQAHH1623 pKa = 6.01 LQALQAVQQEE1633 pKa = 4.43 VWKK1636 pKa = 9.16 PLAAAYY1642 pKa = 9.67 QDD1644 pKa = 4.47 QLDD1647 pKa = 4.11 QPVIPHH1653 pKa = 6.86 PFRR1656 pKa = 11.84 VGDD1659 pKa = 3.85 AVWVRR1664 pKa = 11.84 RR1665 pKa = 11.84 HH1666 pKa = 4.15 QTKK1669 pKa = 10.34 NLEE1672 pKa = 4.19 PRR1674 pKa = 11.84 WKK1676 pKa = 10.63 GPYY1679 pKa = 8.69 TVLLTTPTALKK1690 pKa = 10.56 VDD1692 pKa = 5.53 GISAWIHH1699 pKa = 5.07 AAHH1702 pKa = 6.32 VKK1704 pKa = 10.22 AATTPPAGTAWKK1716 pKa = 9.51 VQRR1719 pKa = 11.84 SQNPLKK1725 pKa = 10.56 IRR1727 pKa = 11.84 LTRR1730 pKa = 11.84 GAPP1733 pKa = 3.18
Molecular weight: 193.75 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.456
IPC2_protein 8.39
IPC_protein 8.244
Toseland 8.858
ProMoST 8.814
Dawson 9.238
Bjellqvist 9.107
Wikipedia 9.385
Rodwell 9.399
Grimsley 9.238
Solomon 9.253
Lehninger 9.224
Nozaki 9.224
DTASelect 9.004
Thurlkill 9.121
EMBOSS 9.37
Sillero 9.297
Patrickios 4.774
IPC_peptide 9.253
IPC2_peptide 7.761
IPC2.peptide.svr19 7.683
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3
0
3
2914
536
1733
971.3
108.02
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.069 ± 0.731
1.51 ± 0.537
4.873 ± 0.316
5.8 ± 0.738
2.539 ± 0.111
7.378 ± 0.799
1.956 ± 0.36
3.02 ± 0.16
5.319 ± 0.256
11.016 ± 0.688
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
1.304 ± 0.123
2.848 ± 0.231
9.334 ± 0.76
5.559 ± 0.323
6.623 ± 0.922
5.834 ± 0.754
7.31 ± 0.51
5.765 ± 0.331
2.162 ± 0.049
2.745 ± 0.167
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here