Amino acid dipepetide frequency for Bat badicivirus 2

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
9.125AlaAla: 9.125 ± 1.067
1.901AlaCys: 1.901 ± 1.092
1.901AlaAsp: 1.901 ± 0.396
3.802AlaGlu: 3.802 ± 0.793
3.422AlaPhe: 3.422 ± 0.122
4.183AlaGly: 4.183 ± 1.773
1.141AlaHis: 1.141 ± 0.737
4.943AlaIle: 4.943 ± 0.056
4.183AlaLys: 4.183 ± 0.381
8.365AlaLeu: 8.365 ± 0.63
1.521AlaMet: 1.521 ± 0.178
3.422AlaAsn: 3.422 ± 1.27
3.802AlaPro: 3.802 ± 0.599
1.521AlaGln: 1.521 ± 1.214
4.563AlaArg: 4.563 ± 0.162
5.323AlaSer: 5.323 ± 1.813
4.183AlaThr: 4.183 ± 1.011
5.323AlaVal: 5.323 ± 0.97
1.521AlaTrp: 1.521 ± 0.874
2.662AlaTyr: 2.662 ± 0.137
0.0AlaXaa: 0.0 ± 0.0
Cys
3.042CysAla: 3.042 ± 0.356
0.76CysCys: 0.76 ± 0.259
1.141CysAsp: 1.141 ± 0.655
0.76CysGlu: 0.76 ± 0.437
0.38CysPhe: 0.38 ± 0.218
2.662CysGly: 2.662 ± 0.833
0.38CysHis: 0.38 ± 0.218
0.38CysIle: 0.38 ± 0.218
0.76CysLys: 0.76 ± 0.437
1.901CysLeu: 1.901 ± 1.092
0.38CysMet: 0.38 ± 0.218
1.141CysAsn: 1.141 ± 0.655
1.901CysPro: 1.901 ± 0.996
0.38CysGln: 0.38 ± 0.477
1.521CysArg: 1.521 ± 0.874
0.76CysSer: 0.76 ± 0.437
1.521CysThr: 1.521 ± 0.874
0.38CysVal: 0.38 ± 0.218
0.0CysTrp: 0.0 ± 0.0
1.521CysTyr: 1.521 ± 1.214
0.0CysXaa: 0.0 ± 0.0
Asp
7.224AspAla: 7.224 ± 1.367
1.521AspCys: 1.521 ± 0.178
2.662AspAsp: 2.662 ± 0.137
2.662AspGlu: 2.662 ± 0.833
2.281AspPhe: 2.281 ± 0.615
2.281AspGly: 2.281 ± 0.615
1.521AspHis: 1.521 ± 0.874
1.901AspIle: 1.901 ± 0.996
2.662AspLys: 2.662 ± 0.137
4.943AspLeu: 4.943 ± 0.752
2.662AspMet: 2.662 ± 0.137
3.802AspAsn: 3.802 ± 1.991
4.943AspPro: 4.943 ± 1.448
1.901AspGln: 1.901 ± 1.092
2.662AspArg: 2.662 ± 1.255
3.042AspSer: 3.042 ± 0.34
2.281AspThr: 2.281 ± 1.473
1.901AspVal: 1.901 ± 0.396
1.521AspTrp: 1.521 ± 0.874
4.183AspTyr: 4.183 ± 0.315
0.0AspXaa: 0.0 ± 0.0
Glu
6.084GluAla: 6.084 ± 1.407
0.0GluCys: 0.0 ± 0.0
1.901GluAsp: 1.901 ± 0.396
2.662GluGlu: 2.662 ± 1.529
3.042GluPhe: 3.042 ± 1.052
1.141GluGly: 1.141 ± 0.655
2.281GluHis: 2.281 ± 0.081
4.183GluIle: 4.183 ± 0.381
3.422GluLys: 3.422 ± 1.27
6.084GluLeu: 6.084 ± 2.103
1.521GluMet: 1.521 ± 0.178
2.662GluAsn: 2.662 ± 0.137
5.323GluPro: 5.323 ± 0.97
3.042GluGln: 3.042 ± 0.34
2.281GluArg: 2.281 ± 0.615
0.76GluSer: 0.76 ± 0.437
3.422GluThr: 3.422 ± 0.574
3.422GluVal: 3.422 ± 0.122
1.521GluTrp: 1.521 ± 0.874
1.901GluTyr: 1.901 ± 0.396
0.0GluXaa: 0.0 ± 0.0
Phe
4.943PheAla: 4.943 ± 1.336
1.141PheCys: 1.141 ± 0.041
4.183PheAsp: 4.183 ± 1.011
0.38PheGlu: 0.38 ± 0.218
1.141PhePhe: 1.141 ± 0.655
3.042PheGly: 3.042 ± 1.747
0.38PheHis: 0.38 ± 0.218
2.281PheIle: 2.281 ± 1.311
1.901PheLys: 1.901 ± 0.996
6.084PheLeu: 6.084 ± 0.015
0.76PheMet: 0.76 ± 0.437
1.521PheAsn: 1.521 ± 0.518
2.281PhePro: 2.281 ± 0.081
2.281PheGln: 2.281 ± 1.473
3.802PheArg: 3.802 ± 0.097
2.662PheSer: 2.662 ± 0.559
3.042PheThr: 3.042 ± 0.34
3.422PheVal: 3.422 ± 0.574
0.38PheTrp: 0.38 ± 0.477
1.141PheTyr: 1.141 ± 0.041
0.0PheXaa: 0.0 ± 0.0
Gly
4.183GlyAla: 4.183 ± 0.381
0.76GlyCys: 0.76 ± 0.437
4.943GlyAsp: 4.943 ± 0.752
2.662GlyGlu: 2.662 ± 0.137
3.802GlyPhe: 3.802 ± 0.097
3.042GlyGly: 3.042 ± 1.036
3.042GlyHis: 3.042 ± 1.052
2.281GlyIle: 2.281 ± 1.311
3.042GlyLys: 3.042 ± 1.052
4.183GlyLeu: 4.183 ± 0.381
2.281GlyMet: 2.281 ± 0.081
2.281GlyAsn: 2.281 ± 1.311
1.521GlyPro: 1.521 ± 0.178
2.281GlyGln: 2.281 ± 0.081
2.662GlyArg: 2.662 ± 0.137
4.943GlySer: 4.943 ± 0.64
3.422GlyThr: 3.422 ± 0.818
2.281GlyVal: 2.281 ± 0.615
1.141GlyTrp: 1.141 ± 0.737
0.76GlyTyr: 0.76 ± 0.259
0.0GlyXaa: 0.0 ± 0.0
His
1.141HisAla: 1.141 ± 0.655
1.141HisCys: 1.141 ± 0.041
2.662HisAsp: 2.662 ± 0.833
0.0HisGlu: 0.0 ± 0.0
1.141HisPhe: 1.141 ± 0.041
1.141HisGly: 1.141 ± 0.041
0.76HisHis: 0.76 ± 0.259
0.76HisIle: 0.76 ± 0.259
1.141HisLys: 1.141 ± 0.041
1.521HisLeu: 1.521 ± 0.874
0.0HisMet: 0.0 ± 0.0
0.76HisAsn: 0.76 ± 0.437
1.521HisPro: 1.521 ± 0.518
1.521HisGln: 1.521 ± 0.874
0.76HisArg: 0.76 ± 0.437
2.281HisSer: 2.281 ± 0.615
3.042HisThr: 3.042 ± 1.036
0.76HisVal: 0.76 ± 0.259
0.0HisTrp: 0.0 ± 0.0
0.38HisTyr: 0.38 ± 0.218
0.0HisXaa: 0.0 ± 0.0
Ile
1.521IleAla: 1.521 ± 0.518
0.38IleCys: 0.38 ± 0.218
2.662IleAsp: 2.662 ± 0.137
3.422IleGlu: 3.422 ± 0.122
1.521IlePhe: 1.521 ± 0.874
2.281IleGly: 2.281 ± 1.311
0.0IleHis: 0.0 ± 0.0
2.281IleIle: 2.281 ± 0.081
1.521IleLys: 1.521 ± 1.214
5.323IleLeu: 5.323 ± 0.274
1.141IleMet: 1.141 ± 0.655
2.662IleAsn: 2.662 ± 0.559
2.281IlePro: 2.281 ± 0.615
1.901IleGln: 1.901 ± 0.3
1.521IleArg: 1.521 ± 0.874
3.422IleSer: 3.422 ± 1.27
4.183IleThr: 4.183 ± 0.381
3.802IleVal: 3.802 ± 0.599
0.76IleTrp: 0.76 ± 0.259
1.901IleTyr: 1.901 ± 0.3
0.0IleXaa: 0.0 ± 0.0
Lys
3.042LysAla: 3.042 ± 0.34
0.38LysCys: 0.38 ± 0.218
3.802LysAsp: 3.802 ± 0.599
2.281LysGlu: 2.281 ± 0.081
3.042LysPhe: 3.042 ± 1.052
2.281LysGly: 2.281 ± 0.615
1.141LysHis: 1.141 ± 0.655
1.901LysIle: 1.901 ± 0.396
2.281LysLys: 2.281 ± 1.311
3.422LysLeu: 3.422 ± 0.122
0.76LysMet: 0.76 ± 0.437
1.521LysAsn: 1.521 ± 0.178
1.901LysPro: 1.901 ± 0.396
1.141LysGln: 1.141 ± 0.041
2.281LysArg: 2.281 ± 0.081
1.901LysSer: 1.901 ± 0.396
3.802LysThr: 3.802 ± 0.599
3.422LysVal: 3.422 ± 0.574
1.141LysTrp: 1.141 ± 0.655
1.141LysTyr: 1.141 ± 0.041
0.0LysXaa: 0.0 ± 0.0
Leu
4.563LeuAla: 4.563 ± 0.858
4.563LeuCys: 4.563 ± 0.533
4.563LeuAsp: 4.563 ± 1.925
7.224LeuGlu: 7.224 ± 0.025
4.943LeuPhe: 4.943 ± 2.144
4.183LeuGly: 4.183 ± 0.315
1.141LeuHis: 1.141 ± 0.655
3.042LeuIle: 3.042 ± 1.052
4.563LeuLys: 4.563 ± 1.925
7.985LeuLeu: 7.985 ± 0.98
1.901LeuMet: 1.901 ± 0.996
4.563LeuAsn: 4.563 ± 0.858
3.802LeuPro: 3.802 ± 0.599
3.042LeuGln: 3.042 ± 0.34
4.563LeuArg: 4.563 ± 1.925
5.703LeuSer: 5.703 ± 1.595
7.985LeuThr: 7.985 ± 1.676
5.323LeuVal: 5.323 ± 1.117
0.38LeuTrp: 0.38 ± 0.218
3.422LeuTyr: 3.422 ± 0.122
0.0LeuXaa: 0.0 ± 0.0
Met
1.141MetAla: 1.141 ± 0.655
0.76MetCys: 0.76 ± 0.437
3.422MetAsp: 3.422 ± 0.122
3.042MetGlu: 3.042 ± 0.356
1.521MetPhe: 1.521 ± 0.178
1.901MetGly: 1.901 ± 0.396
0.76MetHis: 0.76 ± 0.437
1.141MetIle: 1.141 ± 0.041
1.901MetLys: 1.901 ± 0.3
0.76MetLeu: 0.76 ± 0.259
0.38MetMet: 0.38 ± 0.218
3.802MetAsn: 3.802 ± 1.991
0.76MetPro: 0.76 ± 0.259
0.76MetGln: 0.76 ± 0.437
1.141MetArg: 1.141 ± 0.655
1.521MetSer: 1.521 ± 0.874
1.141MetThr: 1.141 ± 0.041
1.141MetVal: 1.141 ± 0.655
0.38MetTrp: 0.38 ± 0.218
1.521MetTyr: 1.521 ± 0.178
0.0MetXaa: 0.0 ± 0.0
Asn
2.662AsnAla: 2.662 ± 1.255
1.901AsnCys: 1.901 ± 0.3
3.042AsnAsp: 3.042 ± 0.34
2.281AsnGlu: 2.281 ± 0.615
3.042AsnPhe: 3.042 ± 0.356
4.183AsnGly: 4.183 ± 0.381
0.76AsnHis: 0.76 ± 0.437
2.281AsnIle: 2.281 ± 0.081
0.38AsnLys: 0.38 ± 0.218
3.422AsnLeu: 3.422 ± 0.122
2.281AsnMet: 2.281 ± 0.615
1.521AsnAsn: 1.521 ± 0.518
2.281AsnPro: 2.281 ± 2.169
1.901AsnGln: 1.901 ± 0.3
2.281AsnArg: 2.281 ± 0.615
3.802AsnSer: 3.802 ± 1.295
2.662AsnThr: 2.662 ± 1.255
3.422AsnVal: 3.422 ± 2.906
0.76AsnTrp: 0.76 ± 0.259
3.042AsnTyr: 3.042 ± 1.732
0.0AsnXaa: 0.0 ± 0.0
Pro
3.422ProAla: 3.422 ± 1.514
0.38ProCys: 0.38 ± 0.218
2.281ProAsp: 2.281 ± 2.169
5.323ProGlu: 5.323 ± 0.97
3.042ProPhe: 3.042 ± 1.732
3.422ProGly: 3.422 ± 0.122
1.141ProHis: 1.141 ± 0.041
3.422ProIle: 3.422 ± 0.574
2.662ProLys: 2.662 ± 0.137
8.745ProLeu: 8.745 ± 1.239
1.901ProMet: 1.901 ± 0.396
1.521ProAsn: 1.521 ± 0.178
4.563ProPro: 4.563 ± 1.229
3.422ProGln: 3.422 ± 0.574
1.901ProArg: 1.901 ± 1.092
4.183ProSer: 4.183 ± 0.381
4.183ProThr: 4.183 ± 2.469
3.422ProVal: 3.422 ± 2.906
0.0ProTrp: 0.0 ± 0.0
2.281ProTyr: 2.281 ± 0.777
0.0ProXaa: 0.0 ± 0.0
Gln
3.422GlnAla: 3.422 ± 0.574
0.0GlnCys: 0.0 ± 0.0
2.281GlnAsp: 2.281 ± 0.615
3.042GlnGlu: 3.042 ± 0.34
1.141GlnPhe: 1.141 ± 0.041
1.901GlnGly: 1.901 ± 0.3
0.76GlnHis: 0.76 ± 0.259
1.901GlnIle: 1.901 ± 0.396
1.141GlnLys: 1.141 ± 0.655
2.662GlnLeu: 2.662 ± 1.255
3.042GlnMet: 3.042 ± 0.483
1.901GlnAsn: 1.901 ± 0.3
2.281GlnPro: 2.281 ± 2.169
0.76GlnGln: 0.76 ± 0.437
3.042GlnArg: 3.042 ± 0.34
1.901GlnSer: 1.901 ± 0.996
1.901GlnThr: 1.901 ± 1.692
3.042GlnVal: 3.042 ± 0.356
1.521GlnTrp: 1.521 ± 1.214
0.76GlnTyr: 0.76 ± 0.955
0.0GlnXaa: 0.0 ± 0.0
Arg
3.422ArgAla: 3.422 ± 0.574
0.0ArgCys: 0.0 ± 0.0
2.281ArgAsp: 2.281 ± 0.615
3.422ArgGlu: 3.422 ± 1.27
2.662ArgPhe: 2.662 ± 1.255
3.802ArgGly: 3.802 ± 0.097
2.281ArgHis: 2.281 ± 0.615
2.281ArgIle: 2.281 ± 0.081
2.662ArgLys: 2.662 ± 0.137
2.281ArgLeu: 2.281 ± 1.311
0.76ArgMet: 0.76 ± 0.437
0.76ArgAsn: 0.76 ± 0.437
2.662ArgPro: 2.662 ± 0.559
2.281ArgGln: 2.281 ± 0.081
4.943ArgArg: 4.943 ± 2.84
3.802ArgSer: 3.802 ± 0.097
3.802ArgThr: 3.802 ± 1.488
4.183ArgVal: 4.183 ± 1.011
0.38ArgTrp: 0.38 ± 0.218
1.901ArgTyr: 1.901 ± 0.396
0.0ArgXaa: 0.0 ± 0.0
Ser
4.563SerAla: 4.563 ± 0.533
1.901SerCys: 1.901 ± 0.396
5.323SerAsp: 5.323 ± 0.274
1.901SerGlu: 1.901 ± 1.092
2.281SerPhe: 2.281 ± 0.777
4.563SerGly: 4.563 ± 0.162
1.141SerHis: 1.141 ± 0.737
3.042SerIle: 3.042 ± 1.036
1.901SerLys: 1.901 ± 1.092
5.703SerLeu: 5.703 ± 1.189
3.042SerMet: 3.042 ± 0.162
3.042SerAsn: 3.042 ± 1.732
4.563SerPro: 4.563 ± 0.162
3.042SerGln: 3.042 ± 1.732
2.281SerArg: 2.281 ± 0.615
5.703SerSer: 5.703 ± 0.493
5.703SerThr: 5.703 ± 2.987
6.464SerVal: 6.464 ± 0.93
1.141SerTrp: 1.141 ± 0.041
2.281SerTyr: 2.281 ± 0.081
0.0SerXaa: 0.0 ± 0.0
Thr
4.183ThrAla: 4.183 ± 1.707
1.141ThrCys: 1.141 ± 0.041
3.042ThrAsp: 3.042 ± 0.34
3.422ThrGlu: 3.422 ± 1.27
3.802ThrPhe: 3.802 ± 2.687
3.042ThrGly: 3.042 ± 0.356
1.141ThrHis: 1.141 ± 0.041
1.521ThrIle: 1.521 ± 0.518
2.281ThrLys: 2.281 ± 0.081
6.844ThrLeu: 6.844 ± 2.331
1.901ThrMet: 1.901 ± 0.3
5.703ThrAsn: 5.703 ± 4.379
6.464ThrPro: 6.464 ± 1.854
1.901ThrGln: 1.901 ± 1.692
2.281ThrArg: 2.281 ± 0.081
6.844ThrSer: 6.844 ± 0.94
5.703ThrThr: 5.703 ± 2.291
4.943ThrVal: 4.943 ± 0.64
1.141ThrTrp: 1.141 ± 0.041
3.422ThrTyr: 3.422 ± 0.122
0.0ThrXaa: 0.0 ± 0.0
Val
5.323ValAla: 5.323 ± 0.274
1.521ValCys: 1.521 ± 0.874
3.042ValAsp: 3.042 ± 0.34
5.323ValGlu: 5.323 ± 0.97
1.521ValPhe: 1.521 ± 0.178
3.802ValGly: 3.802 ± 0.097
1.901ValHis: 1.901 ± 0.3
3.042ValIle: 3.042 ± 0.34
1.141ValLys: 1.141 ± 0.737
4.563ValLeu: 4.563 ± 0.162
1.141ValMet: 1.141 ± 0.655
2.662ValAsn: 2.662 ± 0.137
6.464ValPro: 6.464 ± 2.55
2.662ValGln: 2.662 ± 1.255
3.042ValArg: 3.042 ± 1.052
6.084ValSer: 6.084 ± 1.407
4.183ValThr: 4.183 ± 2.469
3.422ValVal: 3.422 ± 1.27
1.141ValTrp: 1.141 ± 0.041
2.662ValTyr: 2.662 ± 0.137
0.0ValXaa: 0.0 ± 0.0
Trp
1.141TrpAla: 1.141 ± 0.041
0.38TrpCys: 0.38 ± 0.218
0.76TrpAsp: 0.76 ± 0.437
0.38TrpGlu: 0.38 ± 0.218
0.76TrpPhe: 0.76 ± 0.437
0.0TrpGly: 0.0 ± 0.0
0.38TrpHis: 0.38 ± 0.218
0.38TrpIle: 0.38 ± 0.218
1.141TrpLys: 1.141 ± 0.655
0.76TrpLeu: 0.76 ± 0.437
0.38TrpMet: 0.38 ± 0.477
0.76TrpAsn: 0.76 ± 0.259
0.76TrpPro: 0.76 ± 0.259
0.76TrpGln: 0.76 ± 0.259
0.76TrpArg: 0.76 ± 0.955
1.141TrpSer: 1.141 ± 0.041
1.901TrpThr: 1.901 ± 0.396
3.042TrpVal: 3.042 ± 0.34
0.0TrpTrp: 0.0 ± 0.0
0.38TrpTyr: 0.38 ± 0.218
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.662TyrAla: 2.662 ± 1.255
1.141TyrCys: 1.141 ± 0.655
2.662TyrAsp: 2.662 ± 0.559
2.662TyrGlu: 2.662 ± 1.529
2.281TyrPhe: 2.281 ± 0.777
2.662TyrGly: 2.662 ± 0.559
0.38TyrHis: 0.38 ± 0.477
1.521TyrIle: 1.521 ± 0.178
1.901TyrLys: 1.901 ± 0.3
1.901TyrLeu: 1.901 ± 0.3
0.76TyrMet: 0.76 ± 0.259
1.901TyrAsn: 1.901 ± 1.692
1.141TyrPro: 1.141 ± 0.041
2.281TyrGln: 2.281 ± 0.081
2.281TyrArg: 2.281 ± 0.615
3.802TyrSer: 3.802 ± 0.599
2.662TyrThr: 2.662 ± 0.137
1.521TyrVal: 1.521 ± 0.178
1.141TyrTrp: 1.141 ± 0.041
1.901TyrTyr: 1.901 ± 1.692
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (2631 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski