Mycobacterium phage Terror

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Liefievirus; unclassified Liefievirus

Average proteome isoelectric point is 6.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 60 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1D8EVZ3|A0A1D8EVZ3_9CAUD Uncharacterized protein OS=Mycobacterium phage Terror OX=1897550 GN=37 PE=4 SV=1
MM1 pKa = 7.85AEE3 pKa = 4.44DD4 pKa = 4.05RR5 pKa = 11.84DD6 pKa = 4.42GPMSTIDD13 pKa = 3.53AEE15 pKa = 4.44NPRR18 pKa = 11.84SGWSAEE24 pKa = 4.16CHH26 pKa = 5.86DD27 pKa = 4.05CPYY30 pKa = 10.64RR31 pKa = 11.84QLEE34 pKa = 4.29GVDD37 pKa = 3.33AA38 pKa = 5.14

Molecular weight: 4.21 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1D8EVZ0|A0A1D8EVZ0_9CAUD Tail assembly chaperone protein OS=Mycobacterium phage Terror OX=1897550 GN=15 PE=4 SV=1
MM1 pKa = 7.29IWEE4 pKa = 5.41PILAALGGYY13 pKa = 10.12LFFAGRR19 pKa = 11.84DD20 pKa = 3.51VFRR23 pKa = 11.84SVMQSEE29 pKa = 4.4WMFGRR34 pKa = 11.84ILAADD39 pKa = 4.21LRR41 pKa = 11.84AIDD44 pKa = 3.29RR45 pKa = 11.84AQRR48 pKa = 11.84RR49 pKa = 11.84KK50 pKa = 10.45AKK52 pKa = 10.39

Molecular weight: 6.03 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

60

0

60

13358

38

1341

222.6

23.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.258 ± 0.601

0.853 ± 0.131

6.932 ± 0.302

5.652 ± 0.433

2.987 ± 0.193

9.215 ± 0.492

2.126 ± 0.238

4.447 ± 0.203

3.698 ± 0.271

7.546 ± 0.262

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.163 ± 0.117

3.099 ± 0.2

6.251 ± 0.405

3.354 ± 0.142

6.738 ± 0.482

5.128 ± 0.353

5.981 ± 0.241

6.7 ± 0.236

1.961 ± 0.162

1.909 ± 0.147
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski