Amino acid dipepetide frequency for Tacheng tick virus 8

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
6.606AlaAla: 6.606 ± 0.0
0.944AlaCys: 0.944 ± 0.0
3.46AlaAsp: 3.46 ± 0.0
2.988AlaGlu: 2.988 ± 0.0
1.887AlaPhe: 1.887 ± 0.0
2.988AlaGly: 2.988 ± 0.0
1.73AlaHis: 1.73 ± 0.0
5.977AlaIle: 5.977 ± 0.0
5.033AlaLys: 5.033 ± 0.0
5.505AlaLeu: 5.505 ± 0.0
1.258AlaMet: 1.258 ± 0.0
4.089AlaAsn: 4.089 ± 0.0
2.045AlaPro: 2.045 ± 0.0
3.303AlaGln: 3.303 ± 0.0
3.46AlaArg: 3.46 ± 0.0
4.718AlaSer: 4.718 ± 0.0
3.932AlaThr: 3.932 ± 0.0
6.606AlaVal: 6.606 ± 0.0
1.73AlaTrp: 1.73 ± 0.0
4.247AlaTyr: 4.247 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.101CysAla: 1.101 ± 0.0
0.315CysCys: 0.315 ± 0.0
0.472CysAsp: 0.472 ± 0.0
1.573CysGlu: 1.573 ± 0.0
0.786CysPhe: 0.786 ± 0.0
1.887CysGly: 1.887 ± 0.0
0.629CysHis: 0.629 ± 0.0
1.101CysIle: 1.101 ± 0.0
0.157CysLys: 0.157 ± 0.0
1.573CysLeu: 1.573 ± 0.0
0.472CysMet: 0.472 ± 0.0
0.786CysAsn: 0.786 ± 0.0
0.786CysPro: 0.786 ± 0.0
0.944CysGln: 0.944 ± 0.0
0.944CysArg: 0.944 ± 0.0
1.258CysSer: 1.258 ± 0.0
1.258CysThr: 1.258 ± 0.0
1.887CysVal: 1.887 ± 0.0
0.786CysTrp: 0.786 ± 0.0
0.786CysTyr: 0.786 ± 0.0
0.157CysXaa: 0.157 ± 0.0
Asp
3.303AspAla: 3.303 ± 0.0
0.629AspCys: 0.629 ± 0.0
4.247AspAsp: 4.247 ± 0.0
3.46AspGlu: 3.46 ± 0.0
2.045AspPhe: 2.045 ± 0.0
2.202AspGly: 2.202 ± 0.0
0.944AspHis: 0.944 ± 0.0
3.303AspIle: 3.303 ± 0.0
2.202AspLys: 2.202 ± 0.0
4.089AspLeu: 4.089 ± 0.0
1.573AspMet: 1.573 ± 0.0
2.988AspAsn: 2.988 ± 0.0
2.359AspPro: 2.359 ± 0.0
1.887AspGln: 1.887 ± 0.0
2.674AspArg: 2.674 ± 0.0
2.831AspSer: 2.831 ± 0.0
3.146AspThr: 3.146 ± 0.0
5.348AspVal: 5.348 ± 0.0
1.887AspTrp: 1.887 ± 0.0
2.045AspTyr: 2.045 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.932GluAla: 3.932 ± 0.0
1.573GluCys: 1.573 ± 0.0
2.988GluAsp: 2.988 ± 0.0
5.19GluGlu: 5.19 ± 0.0
2.359GluPhe: 2.359 ± 0.0
2.988GluGly: 2.988 ± 0.0
2.045GluHis: 2.045 ± 0.0
3.303GluIle: 3.303 ± 0.0
5.819GluLys: 5.819 ± 0.0
4.089GluLeu: 4.089 ± 0.0
1.73GluMet: 1.73 ± 0.0
3.46GluAsn: 3.46 ± 0.0
1.73GluPro: 1.73 ± 0.0
3.617GluGln: 3.617 ± 0.0
3.46GluArg: 3.46 ± 0.0
1.887GluSer: 1.887 ± 0.0
2.674GluThr: 2.674 ± 0.0
5.033GluVal: 5.033 ± 0.0
0.786GluTrp: 0.786 ± 0.0
1.887GluTyr: 1.887 ± 0.0
0.157GluXaa: 0.157 ± 0.0
Phe
2.517PheAla: 2.517 ± 0.0
0.944PheCys: 0.944 ± 0.0
2.988PheAsp: 2.988 ± 0.0
3.303PheGlu: 3.303 ± 0.0
2.202PhePhe: 2.202 ± 0.0
2.517PheGly: 2.517 ± 0.0
1.101PheHis: 1.101 ± 0.0
2.831PheIle: 2.831 ± 0.0
2.359PheLys: 2.359 ± 0.0
4.089PheLeu: 4.089 ± 0.0
1.416PheMet: 1.416 ± 0.0
1.416PheAsn: 1.416 ± 0.0
1.416PhePro: 1.416 ± 0.0
1.416PheGln: 1.416 ± 0.0
1.573PheArg: 1.573 ± 0.0
3.303PheSer: 3.303 ± 0.0
2.517PheThr: 2.517 ± 0.0
2.045PheVal: 2.045 ± 0.0
0.315PheTrp: 0.315 ± 0.0
1.101PheTyr: 1.101 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
5.19GlyAla: 5.19 ± 0.0
0.786GlyCys: 0.786 ± 0.0
3.775GlyAsp: 3.775 ± 0.0
3.932GlyGlu: 3.932 ± 0.0
2.831GlyPhe: 2.831 ± 0.0
2.674GlyGly: 2.674 ± 0.0
0.944GlyHis: 0.944 ± 0.0
2.674GlyIle: 2.674 ± 0.0
3.303GlyLys: 3.303 ± 0.0
5.348GlyLeu: 5.348 ± 0.0
2.359GlyMet: 2.359 ± 0.0
3.932GlyAsn: 3.932 ± 0.0
1.416GlyPro: 1.416 ± 0.0
1.73GlyGln: 1.73 ± 0.0
3.932GlyArg: 3.932 ± 0.0
3.303GlySer: 3.303 ± 0.0
2.988GlyThr: 2.988 ± 0.0
4.876GlyVal: 4.876 ± 0.0
0.786GlyTrp: 0.786 ± 0.0
2.202GlyTyr: 2.202 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.573HisAla: 1.573 ± 0.0
0.472HisCys: 0.472 ± 0.0
1.416HisAsp: 1.416 ± 0.0
1.573HisGlu: 1.573 ± 0.0
0.629HisPhe: 0.629 ± 0.0
1.258HisGly: 1.258 ± 0.0
0.315HisHis: 0.315 ± 0.0
0.944HisIle: 0.944 ± 0.0
1.573HisLys: 1.573 ± 0.0
2.831HisLeu: 2.831 ± 0.0
1.101HisMet: 1.101 ± 0.0
0.629HisAsn: 0.629 ± 0.0
1.416HisPro: 1.416 ± 0.0
0.0HisGln: 0.0 ± 0.0
0.944HisArg: 0.944 ± 0.0
1.887HisSer: 1.887 ± 0.0
1.101HisThr: 1.101 ± 0.0
1.416HisVal: 1.416 ± 0.0
0.157HisTrp: 0.157 ± 0.0
1.101HisTyr: 1.101 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.988IleAla: 2.988 ± 0.0
0.786IleCys: 0.786 ± 0.0
2.674IleAsp: 2.674 ± 0.0
3.46IleGlu: 3.46 ± 0.0
1.887IlePhe: 1.887 ± 0.0
5.19IleGly: 5.19 ± 0.0
1.573IleHis: 1.573 ± 0.0
3.932IleIle: 3.932 ± 0.0
4.247IleLys: 4.247 ± 0.0
5.977IleLeu: 5.977 ± 0.0
1.416IleMet: 1.416 ± 0.0
3.775IleAsn: 3.775 ± 0.0
2.831IlePro: 2.831 ± 0.0
2.202IleGln: 2.202 ± 0.0
4.404IleArg: 4.404 ± 0.0
4.876IleSer: 4.876 ± 0.0
2.517IleThr: 2.517 ± 0.0
4.247IleVal: 4.247 ± 0.0
0.786IleTrp: 0.786 ± 0.0
1.887IleTyr: 1.887 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
3.46LysAla: 3.46 ± 0.0
1.258LysCys: 1.258 ± 0.0
3.146LysAsp: 3.146 ± 0.0
3.617LysGlu: 3.617 ± 0.0
2.988LysPhe: 2.988 ± 0.0
2.674LysGly: 2.674 ± 0.0
1.887LysHis: 1.887 ± 0.0
5.977LysIle: 5.977 ± 0.0
4.561LysLys: 4.561 ± 0.0
7.392LysLeu: 7.392 ± 0.0
1.573LysMet: 1.573 ± 0.0
2.202LysAsn: 2.202 ± 0.0
2.988LysPro: 2.988 ± 0.0
3.146LysGln: 3.146 ± 0.0
2.988LysArg: 2.988 ± 0.0
2.831LysSer: 2.831 ± 0.0
4.876LysThr: 4.876 ± 0.0
3.775LysVal: 3.775 ± 0.0
0.786LysTrp: 0.786 ± 0.0
2.359LysTyr: 2.359 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
6.92LeuAla: 6.92 ± 0.0
1.73LeuCys: 1.73 ± 0.0
4.718LeuAsp: 4.718 ± 0.0
4.561LeuGlu: 4.561 ± 0.0
3.303LeuPhe: 3.303 ± 0.0
5.033LeuGly: 5.033 ± 0.0
1.887LeuHis: 1.887 ± 0.0
2.988LeuIle: 2.988 ± 0.0
5.033LeuLys: 5.033 ± 0.0
7.864LeuLeu: 7.864 ± 0.0
3.146LeuMet: 3.146 ± 0.0
4.404LeuAsn: 4.404 ± 0.0
4.404LeuPro: 4.404 ± 0.0
2.831LeuGln: 2.831 ± 0.0
5.662LeuArg: 5.662 ± 0.0
5.662LeuSer: 5.662 ± 0.0
6.449LeuThr: 6.449 ± 0.0
7.392LeuVal: 7.392 ± 0.0
1.73LeuTrp: 1.73 ± 0.0
2.674LeuTyr: 2.674 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.887MetAla: 1.887 ± 0.0
1.101MetCys: 1.101 ± 0.0
1.73MetAsp: 1.73 ± 0.0
1.416MetGlu: 1.416 ± 0.0
1.73MetPhe: 1.73 ± 0.0
0.629MetGly: 0.629 ± 0.0
0.472MetHis: 0.472 ± 0.0
1.416MetIle: 1.416 ± 0.0
1.73MetLys: 1.73 ± 0.0
3.46MetLeu: 3.46 ± 0.0
0.786MetMet: 0.786 ± 0.0
1.258MetAsn: 1.258 ± 0.0
0.786MetPro: 0.786 ± 0.0
1.101MetGln: 1.101 ± 0.0
1.258MetArg: 1.258 ± 0.0
2.359MetSer: 2.359 ± 0.0
1.73MetThr: 1.73 ± 0.0
1.258MetVal: 1.258 ± 0.0
0.157MetTrp: 0.157 ± 0.0
0.786MetTyr: 0.786 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.932AsnAla: 3.932 ± 0.0
0.786AsnCys: 0.786 ± 0.0
2.517AsnAsp: 2.517 ± 0.0
2.674AsnGlu: 2.674 ± 0.0
3.46AsnPhe: 3.46 ± 0.0
2.517AsnGly: 2.517 ± 0.0
0.786AsnHis: 0.786 ± 0.0
2.831AsnIle: 2.831 ± 0.0
2.517AsnLys: 2.517 ± 0.0
3.775AsnLeu: 3.775 ± 0.0
1.101AsnMet: 1.101 ± 0.0
0.944AsnAsn: 0.944 ± 0.0
1.573AsnPro: 1.573 ± 0.0
1.573AsnGln: 1.573 ± 0.0
1.73AsnArg: 1.73 ± 0.0
1.73AsnSer: 1.73 ± 0.0
1.887AsnThr: 1.887 ± 0.0
2.674AsnVal: 2.674 ± 0.0
0.944AsnTrp: 0.944 ± 0.0
2.517AsnTyr: 2.517 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
2.674ProAla: 2.674 ± 0.0
0.157ProCys: 0.157 ± 0.0
1.887ProAsp: 1.887 ± 0.0
2.517ProGlu: 2.517 ± 0.0
1.573ProPhe: 1.573 ± 0.0
2.988ProGly: 2.988 ± 0.0
0.629ProHis: 0.629 ± 0.0
2.202ProIle: 2.202 ± 0.0
3.303ProLys: 3.303 ± 0.0
1.887ProLeu: 1.887 ± 0.0
0.472ProMet: 0.472 ± 0.0
0.472ProAsn: 0.472 ± 0.0
1.101ProPro: 1.101 ± 0.0
1.887ProGln: 1.887 ± 0.0
2.202ProArg: 2.202 ± 0.0
2.359ProSer: 2.359 ± 0.0
3.775ProThr: 3.775 ± 0.0
3.775ProVal: 3.775 ± 0.0
0.157ProTrp: 0.157 ± 0.0
1.101ProTyr: 1.101 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.831GlnAla: 2.831 ± 0.0
0.629GlnCys: 0.629 ± 0.0
1.416GlnAsp: 1.416 ± 0.0
2.359GlnGlu: 2.359 ± 0.0
1.573GlnPhe: 1.573 ± 0.0
2.674GlnGly: 2.674 ± 0.0
1.258GlnHis: 1.258 ± 0.0
3.303GlnIle: 3.303 ± 0.0
2.045GlnLys: 2.045 ± 0.0
3.775GlnLeu: 3.775 ± 0.0
0.944GlnMet: 0.944 ± 0.0
1.258GlnAsn: 1.258 ± 0.0
1.887GlnPro: 1.887 ± 0.0
2.202GlnGln: 2.202 ± 0.0
2.674GlnArg: 2.674 ± 0.0
1.73GlnSer: 1.73 ± 0.0
1.887GlnThr: 1.887 ± 0.0
3.146GlnVal: 3.146 ± 0.0
0.472GlnTrp: 0.472 ± 0.0
1.258GlnTyr: 1.258 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.775ArgAla: 3.775 ± 0.0
0.786ArgCys: 0.786 ± 0.0
2.517ArgAsp: 2.517 ± 0.0
4.247ArgGlu: 4.247 ± 0.0
2.359ArgPhe: 2.359 ± 0.0
2.674ArgGly: 2.674 ± 0.0
1.258ArgHis: 1.258 ± 0.0
3.146ArgIle: 3.146 ± 0.0
3.46ArgLys: 3.46 ± 0.0
6.291ArgLeu: 6.291 ± 0.0
1.73ArgMet: 1.73 ± 0.0
2.359ArgAsn: 2.359 ± 0.0
1.101ArgPro: 1.101 ± 0.0
2.202ArgGln: 2.202 ± 0.0
2.674ArgArg: 2.674 ± 0.0
3.617ArgSer: 3.617 ± 0.0
4.247ArgThr: 4.247 ± 0.0
4.089ArgVal: 4.089 ± 0.0
0.472ArgTrp: 0.472 ± 0.0
3.303ArgTyr: 3.303 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
4.404SerAla: 4.404 ± 0.0
1.258SerCys: 1.258 ± 0.0
3.303SerAsp: 3.303 ± 0.0
2.517SerGlu: 2.517 ± 0.0
1.73SerPhe: 1.73 ± 0.0
5.505SerGly: 5.505 ± 0.0
0.944SerHis: 0.944 ± 0.0
4.718SerIle: 4.718 ± 0.0
3.617SerLys: 3.617 ± 0.0
5.033SerLeu: 5.033 ± 0.0
1.101SerMet: 1.101 ± 0.0
1.73SerAsn: 1.73 ± 0.0
1.258SerPro: 1.258 ± 0.0
2.517SerGln: 2.517 ± 0.0
4.561SerArg: 4.561 ± 0.0
3.617SerSer: 3.617 ± 0.0
5.033SerThr: 5.033 ± 0.0
4.404SerVal: 4.404 ± 0.0
1.258SerTrp: 1.258 ± 0.0
1.573SerTyr: 1.573 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
4.089ThrAla: 4.089 ± 0.0
1.573ThrCys: 1.573 ± 0.0
2.831ThrAsp: 2.831 ± 0.0
2.988ThrGlu: 2.988 ± 0.0
2.359ThrPhe: 2.359 ± 0.0
5.348ThrGly: 5.348 ± 0.0
0.944ThrHis: 0.944 ± 0.0
3.932ThrIle: 3.932 ± 0.0
4.561ThrLys: 4.561 ± 0.0
4.876ThrLeu: 4.876 ± 0.0
1.573ThrMet: 1.573 ± 0.0
1.73ThrAsn: 1.73 ± 0.0
2.202ThrPro: 2.202 ± 0.0
2.202ThrGln: 2.202 ± 0.0
4.089ThrArg: 4.089 ± 0.0
3.46ThrSer: 3.46 ± 0.0
3.146ThrThr: 3.146 ± 0.0
5.505ThrVal: 5.505 ± 0.0
1.258ThrTrp: 1.258 ± 0.0
2.359ThrTyr: 2.359 ± 0.0
0.157ThrXaa: 0.157 ± 0.0
Val
6.291ValAla: 6.291 ± 0.0
2.202ValCys: 2.202 ± 0.0
4.247ValAsp: 4.247 ± 0.0
4.876ValGlu: 4.876 ± 0.0
2.988ValPhe: 2.988 ± 0.0
4.561ValGly: 4.561 ± 0.0
1.73ValHis: 1.73 ± 0.0
3.46ValIle: 3.46 ± 0.0
5.977ValLys: 5.977 ± 0.0
7.235ValLeu: 7.235 ± 0.0
2.045ValMet: 2.045 ± 0.0
2.831ValAsn: 2.831 ± 0.0
3.146ValPro: 3.146 ± 0.0
3.303ValGln: 3.303 ± 0.0
4.089ValArg: 4.089 ± 0.0
5.19ValSer: 5.19 ± 0.0
4.404ValThr: 4.404 ± 0.0
6.291ValVal: 6.291 ± 0.0
1.101ValTrp: 1.101 ± 0.0
2.045ValTyr: 2.045 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
2.202TrpAla: 2.202 ± 0.0
0.315TrpCys: 0.315 ± 0.0
0.786TrpAsp: 0.786 ± 0.0
1.416TrpGlu: 1.416 ± 0.0
1.258TrpPhe: 1.258 ± 0.0
0.629TrpGly: 0.629 ± 0.0
0.472TrpHis: 0.472 ± 0.0
1.101TrpIle: 1.101 ± 0.0
1.258TrpLys: 1.258 ± 0.0
0.786TrpLeu: 0.786 ± 0.0
0.157TrpMet: 0.157 ± 0.0
0.315TrpAsn: 0.315 ± 0.0
0.786TrpPro: 0.786 ± 0.0
0.472TrpGln: 0.472 ± 0.0
0.786TrpArg: 0.786 ± 0.0
0.472TrpSer: 0.472 ± 0.0
1.258TrpThr: 1.258 ± 0.0
0.629TrpVal: 0.629 ± 0.0
0.315TrpTrp: 0.315 ± 0.0
0.786TrpTyr: 0.786 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.674TyrAla: 2.674 ± 0.0
1.573TyrCys: 1.573 ± 0.0
1.887TyrAsp: 1.887 ± 0.0
2.045TyrGlu: 2.045 ± 0.0
1.416TyrPhe: 1.416 ± 0.0
1.887TyrGly: 1.887 ± 0.0
0.786TyrHis: 0.786 ± 0.0
2.517TyrIle: 2.517 ± 0.0
1.73TyrLys: 1.73 ± 0.0
2.517TyrLeu: 2.517 ± 0.0
0.944TyrMet: 0.944 ± 0.0
1.887TyrAsn: 1.887 ± 0.0
1.887TyrPro: 1.887 ± 0.0
0.786TyrGln: 0.786 ± 0.0
2.202TyrArg: 2.202 ± 0.0
2.988TyrSer: 2.988 ± 0.0
2.359TyrThr: 2.359 ± 0.0
3.617TyrVal: 3.617 ± 0.0
0.315TyrTrp: 0.315 ± 0.0
2.517TyrTyr: 2.517 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.157XaaAla: 0.157 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.157XaaAsp: 0.157 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.157XaaGly: 0.157 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (6359 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski