Munguba virus
Average proteome isoelectric point is 6.83
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|I1T343|I1T343_9VIRU Nonstructural protein OS=Munguba virus OX=1048854 PE=4 SV=1
MM1 pKa = 7.37 SFLWNLPVVRR11 pKa = 11.84 PSSCFLGLPSVNYY24 pKa = 10.0 VAFNKK29 pKa = 9.24 MATFEE34 pKa = 4.11 ACKK37 pKa = 10.79 VNGAEE42 pKa = 5.15 IPLKK46 pKa = 10.34 HH47 pKa = 6.8 LKK49 pKa = 10.06 LCYY52 pKa = 9.94 DD53 pKa = 3.49 KK54 pKa = 11.22 RR55 pKa = 11.84 PTLFDD60 pKa = 3.49 FLRR63 pKa = 11.84 NRR65 pKa = 11.84 EE66 pKa = 4.2 VPVSWGDD73 pKa = 3.48 HH74 pKa = 5.87 TDD76 pKa = 3.54 DD77 pKa = 4.74 QILNRR82 pKa = 11.84 SPRR85 pKa = 11.84 TFEE88 pKa = 3.79 GLMFGLSEE96 pKa = 4.14 IEE98 pKa = 3.79 EE99 pKa = 4.39 VEE101 pKa = 3.92 YY102 pKa = 11.2 GRR104 pKa = 11.84 YY105 pKa = 9.02 NEE107 pKa = 4.8 PYY109 pKa = 9.96 LKK111 pKa = 10.55 KK112 pKa = 10.46 AVSWPLSYY120 pKa = 10.31 PSHH123 pKa = 6.11 TFFNLAVRR131 pKa = 11.84 KK132 pKa = 8.16 TEE134 pKa = 3.75 MGNWLHH140 pKa = 7.04 SSMWATMMLRR150 pKa = 11.84 MSHH153 pKa = 6.01 TDD155 pKa = 3.12 NLEE158 pKa = 3.52 EE159 pKa = 4.96 SIIKK163 pKa = 8.91 VRR165 pKa = 11.84 KK166 pKa = 9.81 RR167 pKa = 11.84 IIEE170 pKa = 4.05 KK171 pKa = 10.71 ANDD174 pKa = 3.32 MGLDD178 pKa = 3.7 LSLFTGEE185 pKa = 4.39 NLILEE190 pKa = 4.57 IAHH193 pKa = 6.04 LQCLRR198 pKa = 11.84 LIYY201 pKa = 10.32 ASRR204 pKa = 11.84 KK205 pKa = 6.85 EE206 pKa = 3.87 RR207 pKa = 11.84 EE208 pKa = 3.77 RR209 pKa = 11.84 GVNHH213 pKa = 6.65 SKK215 pKa = 9.48 TYY217 pKa = 10.4 SIVRR221 pKa = 11.84 SYY223 pKa = 11.89 DD224 pKa = 3.47 CFSVISDD231 pKa = 3.65 VNFDD235 pKa = 3.72 PMIADD240 pKa = 3.87 SLFGSNDD247 pKa = 2.61 GTMSGEE253 pKa = 3.97 SDD255 pKa = 3.18 VDD257 pKa = 3.41 QLRR260 pKa = 11.84 VDD262 pKa = 3.92 LEE264 pKa = 4.66 RR265 pKa = 11.84 YY266 pKa = 9.71 LSLL269 pKa = 5.29
Molecular weight: 31.06 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.728
IPC2_protein 5.728
IPC_protein 5.753
Toseland 6.097
ProMoST 6.084
Dawson 5.995
Bjellqvist 6.008
Wikipedia 5.995
Rodwell 5.97
Grimsley 6.237
Solomon 5.995
Lehninger 5.982
Nozaki 6.249
DTASelect 6.44
Thurlkill 6.44
EMBOSS 6.402
Sillero 6.351
Patrickios 4.151
IPC_peptide 6.008
IPC2_peptide 6.338
IPC2.peptide.svr19 6.322
Protein with the highest isoelectric point:
>tr|I1T343|I1T343_9VIRU Nonstructural protein OS=Munguba virus OX=1048854 PE=4 SV=1
MM1 pKa = 7.2 SADD4 pKa = 3.58 YY5 pKa = 10.81 QRR7 pKa = 11.84 IAIEE11 pKa = 4.55 FGSEE15 pKa = 3.99 PIDD18 pKa = 3.8 RR19 pKa = 11.84 DD20 pKa = 5.19 AITLWVNEE28 pKa = 3.91 FAYY31 pKa = 10.56 QGFDD35 pKa = 2.87 ASNVLRR41 pKa = 11.84 LLQQRR46 pKa = 11.84 GGATWKK52 pKa = 10.48 EE53 pKa = 4.07 DD54 pKa = 3.36 AKK56 pKa = 11.53 KK57 pKa = 10.17 MIILVLTRR65 pKa = 11.84 GNKK68 pKa = 8.28 PEE70 pKa = 3.96 NMVKK74 pKa = 10.29 RR75 pKa = 11.84 MSEE78 pKa = 3.59 AGKK81 pKa = 8.65 RR82 pKa = 11.84 TVEE85 pKa = 3.96 ALVVKK90 pKa = 10.05 YY91 pKa = 8.12 QLKK94 pKa = 10.21 SGNPGRR100 pKa = 11.84 DD101 pKa = 3.51 DD102 pKa = 3.36 LTLARR107 pKa = 11.84 VAAALAPWTCQAAFVVSEE125 pKa = 4.16 FMPVTGRR132 pKa = 11.84 AMDD135 pKa = 3.93 DD136 pKa = 3.34 HH137 pKa = 6.5 AASYY141 pKa = 9.17 PRR143 pKa = 11.84 GMMHH147 pKa = 6.83 TSFAGLIDD155 pKa = 3.56 PTLPQSTYY163 pKa = 9.61 SDD165 pKa = 3.49 LVAAHH170 pKa = 6.89 SLFLYY175 pKa = 10.08 YY176 pKa = 10.47 FSKK179 pKa = 9.82 TINVGLRR186 pKa = 11.84 GKK188 pKa = 8.6 TKK190 pKa = 11.0 AEE192 pKa = 3.97 VEE194 pKa = 4.26 ASFSQPMQAAINSGFISGSQRR215 pKa = 11.84 RR216 pKa = 11.84 QFLQNLGIIDD226 pKa = 4.18 RR227 pKa = 11.84 NSVAVPAVATAAAAYY242 pKa = 7.98 RR243 pKa = 11.84 ALSS246 pKa = 3.45
Molecular weight: 26.92 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.768
IPC2_protein 8.741
IPC_protein 8.756
Toseland 9.268
ProMoST 9.107
Dawson 9.575
Bjellqvist 9.326
Wikipedia 9.78
Rodwell 9.75
Grimsley 9.677
Solomon 9.648
Lehninger 9.604
Nozaki 9.311
DTASelect 9.297
Thurlkill 9.399
EMBOSS 9.706
Sillero 9.516
Patrickios 4.876
IPC_peptide 9.648
IPC2_peptide 7.936
IPC2.peptide.svr19 7.738
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4
0
4
4023
246
2090
1005.8
113.06
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
5.792 ± 1.443
2.784 ± 0.702
5.667 ± 0.486
6.513 ± 0.436
4.599 ± 0.317
5.841 ± 0.447
2.337 ± 0.381
6.985 ± 0.615
6.637 ± 0.537
8.949 ± 0.651
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
3.132 ± 0.68
3.853 ± 0.373
3.604 ± 0.278
3.082 ± 0.546
5.319 ± 0.377
10.241 ± 0.548
4.822 ± 0.205
5.866 ± 0.373
1.193 ± 0.146
2.784 ± 0.269
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here