Streptococcus satellite phage Javan468

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 6.65

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 19 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZPN4|A0A4D5ZPN4_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan468 OX=2558716 GN=JavanS468_0015 PE=4 SV=1
MM1 pKa = 7.53NDD3 pKa = 4.12KK4 pKa = 10.55ILSNYY9 pKa = 9.55EE10 pKa = 3.95LLCTEE15 pKa = 4.85LEE17 pKa = 4.34NVISTLEE24 pKa = 3.85MAITDD29 pKa = 3.55IDD31 pKa = 3.72QDD33 pKa = 3.48KK34 pKa = 9.69ATALVAVATNGLKK47 pKa = 10.58HH48 pKa = 6.21LVSEE52 pKa = 4.35HH53 pKa = 6.38TEE55 pKa = 3.65LSDD58 pKa = 4.95RR59 pKa = 11.84FFKK62 pKa = 10.73EE63 pKa = 3.6YY64 pKa = 10.97DD65 pKa = 3.3NEE67 pKa = 4.15

Molecular weight: 7.6 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZR12|A0A4D5ZR12_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan468 OX=2558716 GN=JavanS468_0013 PE=4 SV=1
MM1 pKa = 7.82LITEE5 pKa = 5.39GIAVKK10 pKa = 10.13VRR12 pKa = 11.84KK13 pKa = 9.55KK14 pKa = 9.97RR15 pKa = 11.84TVEE18 pKa = 3.81RR19 pKa = 11.84LGKK22 pKa = 9.97VALAKK27 pKa = 10.56KK28 pKa = 10.42LGVTPPTLGKK38 pKa = 10.3VEE40 pKa = 4.23NGNYY44 pKa = 8.24DD45 pKa = 3.37APKK48 pKa = 10.04RR49 pKa = 11.84IYY51 pKa = 10.18EE52 pKa = 4.36SVMTWLVEE60 pKa = 4.49EE61 pKa = 4.4II62 pKa = 4.06

Molecular weight: 6.94 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

19

0

19

2805

56

396

147.6

17.0

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.526 ± 0.499

0.606 ± 0.137

5.954 ± 0.354

8.77 ± 0.998

3.529 ± 0.418

4.635 ± 0.346

1.711 ± 0.21

7.736 ± 0.729

9.875 ± 0.608

9.697 ± 0.546

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.137 ± 0.245

6.061 ± 0.545

2.531 ± 0.241

4.563 ± 0.559

3.636 ± 0.382

5.455 ± 0.495

5.49 ± 0.514

6.096 ± 0.53

1.07 ± 0.211

3.922 ± 0.372
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski