Torque teno virus (isolate Japanese macaque/Japan/Mf-TTV9/2000) (TTV)

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus

Average proteome isoelectric point is 7.73

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q9DUC5|YORF2_TTVV9 Uncharacterized ORF2 protein OS=Torque teno virus (isolate Japanese macaque/Japan/Mf-TTV9/2000) OX=687364 GN=ORF2 PE=4 SV=1
MM1 pKa = 7.08TNQWEE6 pKa = 4.49PTTLNAWGRR15 pKa = 11.84EE16 pKa = 4.2EE17 pKa = 3.68AWLRR21 pKa = 11.84SVVDD25 pKa = 3.27SHH27 pKa = 7.77QSFCGCNDD35 pKa = 3.53PGFHH39 pKa = 7.06LGLLLHH45 pKa = 6.36SAGRR49 pKa = 11.84HH50 pKa = 4.73LGGPGGPQPPPAPGGPGVGGEE71 pKa = 4.33GPRR74 pKa = 11.84RR75 pKa = 11.84FLPLPGLPANPEE87 pKa = 4.19EE88 pKa = 5.15PGHH91 pKa = 5.79QRR93 pKa = 11.84PPCPGGPGDD102 pKa = 3.93AGGAGGVDD110 pKa = 3.3AEE112 pKa = 4.52TGEE115 pKa = 4.67GEE117 pKa = 4.21WRR119 pKa = 11.84PEE121 pKa = 4.45DD122 pKa = 3.64IAEE125 pKa = 4.48LLDD128 pKa = 3.79GLEE131 pKa = 4.48DD132 pKa = 3.6AEE134 pKa = 4.78KK135 pKa = 10.71RR136 pKa = 3.79

Molecular weight: 14.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q9DUC5|YORF2_TTVV9 Uncharacterized ORF2 protein OS=Torque teno virus (isolate Japanese macaque/Japan/Mf-TTV9/2000) OX=687364 GN=ORF2 PE=4 SV=1
MM1 pKa = 7.56PWWPWRR7 pKa = 11.84RR8 pKa = 11.84WRR10 pKa = 11.84RR11 pKa = 11.84WRR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84RR16 pKa = 11.84GNWRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84VAPRR26 pKa = 11.84RR27 pKa = 11.84YY28 pKa = 9.42RR29 pKa = 11.84RR30 pKa = 11.84TARR33 pKa = 11.84RR34 pKa = 11.84ARR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84KK40 pKa = 8.55AVRR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84VRR51 pKa = 11.84RR52 pKa = 11.84RR53 pKa = 11.84GYY55 pKa = 7.43YY56 pKa = 8.41RR57 pKa = 11.84RR58 pKa = 11.84YY59 pKa = 9.0RR60 pKa = 11.84RR61 pKa = 11.84RR62 pKa = 11.84RR63 pKa = 11.84RR64 pKa = 11.84YY65 pKa = 9.64KK66 pKa = 10.18RR67 pKa = 11.84RR68 pKa = 11.84LLILKK73 pKa = 8.65QWQPTTNLRR82 pKa = 11.84LTVKK86 pKa = 10.46GLIPVVVMGKK96 pKa = 10.63GKK98 pKa = 7.51TQNNFGQWEE107 pKa = 4.14QTVPLEE113 pKa = 4.26GEE115 pKa = 4.33SYY117 pKa = 10.84GGSFTIRR124 pKa = 11.84KK125 pKa = 7.25FTLQTLYY132 pKa = 11.08EE133 pKa = 5.06DD134 pKa = 3.85YY135 pKa = 11.35LKK137 pKa = 10.97LRR139 pKa = 11.84NRR141 pKa = 11.84WSRR144 pKa = 11.84SNTDD148 pKa = 3.38LEE150 pKa = 4.73LIRR153 pKa = 11.84YY154 pKa = 6.71TGLNLRR160 pKa = 11.84LYY162 pKa = 9.52RR163 pKa = 11.84HH164 pKa = 6.19EE165 pKa = 4.22FSDD168 pKa = 4.59YY169 pKa = 9.26IVHH172 pKa = 6.45YY173 pKa = 10.48SLEE176 pKa = 4.29TPMEE180 pKa = 4.39VGLEE184 pKa = 4.1SHH186 pKa = 6.51MLAHH190 pKa = 6.84PLKK193 pKa = 9.87MIMSSKK199 pKa = 10.28HH200 pKa = 3.47VTVPSLLTKK209 pKa = 10.41KK210 pKa = 10.45GGRR213 pKa = 11.84RR214 pKa = 11.84YY215 pKa = 10.07LRR217 pKa = 11.84LKK219 pKa = 10.38IPPPKK224 pKa = 10.73LMMTQWYY231 pKa = 7.62FQKK234 pKa = 10.44EE235 pKa = 4.18FCQVGLVLLSISTATLMHH253 pKa = 6.97PWMAPFVNSPALTIYY268 pKa = 10.53AVNHH272 pKa = 5.13KK273 pKa = 8.76TYY275 pKa = 10.95SDD277 pKa = 3.6MSILPSNNQGSTKK290 pKa = 10.67NEE292 pKa = 4.45LIEE295 pKa = 4.04TLYY298 pKa = 10.24TAEE301 pKa = 3.93HH302 pKa = 6.85TYY304 pKa = 11.39NPMAQRR310 pKa = 11.84IWGNIKK316 pKa = 9.45PQNTNFTPEE325 pKa = 4.11NYY327 pKa = 7.74WNKK330 pKa = 9.18WNEE333 pKa = 3.33IHH335 pKa = 7.15TKK337 pKa = 10.09IKK339 pKa = 9.91TNRR342 pKa = 11.84QSEE345 pKa = 4.4LTQLKK350 pKa = 9.35QMRR353 pKa = 11.84KK354 pKa = 8.82RR355 pKa = 11.84LEE357 pKa = 3.93LTTEE361 pKa = 3.98NDD363 pKa = 3.48YY364 pKa = 11.36QDD366 pKa = 4.04PNFGLSYY373 pKa = 11.09GLYY376 pKa = 10.2SPLLLYY382 pKa = 10.43PEE384 pKa = 4.91MYY386 pKa = 10.32FPEE389 pKa = 4.1QSKK392 pKa = 10.38VYY394 pKa = 10.48QKK396 pKa = 11.26ARR398 pKa = 11.84YY399 pKa = 8.99NPLLDD404 pKa = 3.43QGIGNVVWTEE414 pKa = 3.67PLTKK418 pKa = 9.38KK419 pKa = 8.16TCDD422 pKa = 3.72YY423 pKa = 11.34ASQAYY428 pKa = 9.38NVIKK432 pKa = 10.44DD433 pKa = 3.63APLYY437 pKa = 10.25LALFGYY443 pKa = 10.22IDD445 pKa = 3.86ICSKK449 pKa = 10.19LAKK452 pKa = 10.18DD453 pKa = 3.32KK454 pKa = 11.38SFYY457 pKa = 10.58LSNRR461 pKa = 11.84VCVKK465 pKa = 10.4CPYY468 pKa = 9.18TVPQLLSKK476 pKa = 9.82TNATLGHH483 pKa = 6.38VILSEE488 pKa = 3.75NFMRR492 pKa = 11.84GLVPSKK498 pKa = 10.71DD499 pKa = 3.79SYY501 pKa = 10.85VPLYY505 pKa = 10.22MRR507 pKa = 11.84GKK509 pKa = 8.43WYY511 pKa = 9.56PSIYY515 pKa = 9.48HH516 pKa = 4.83QEE518 pKa = 3.98EE519 pKa = 4.21VIEE522 pKa = 5.21AIVSSGPFVPRR533 pKa = 11.84DD534 pKa = 3.7QITKK538 pKa = 10.48SLDD541 pKa = 2.95ITIGCRR547 pKa = 11.84FGFRR551 pKa = 11.84IGGNLLNPKK560 pKa = 9.77QVGDD564 pKa = 3.63PCKK567 pKa = 10.47QPTHH571 pKa = 6.96PLPAPGGGDD580 pKa = 3.71LLRR583 pKa = 11.84AVQVSDD589 pKa = 3.41PRR591 pKa = 11.84KK592 pKa = 10.09VGIQFHH598 pKa = 6.34PWDD601 pKa = 4.34LRR603 pKa = 11.84RR604 pKa = 11.84GMLSTSSIKK613 pKa = 10.58RR614 pKa = 11.84MLQDD618 pKa = 3.36SDD620 pKa = 4.27DD621 pKa = 4.52DD622 pKa = 4.29EE623 pKa = 6.82SIEE626 pKa = 4.38FPPKK630 pKa = 10.08AWPGDD635 pKa = 3.66PVPVGRR641 pKa = 11.84TLEE644 pKa = 4.19EE645 pKa = 4.08RR646 pKa = 11.84CSSSLYY652 pKa = 10.64HH653 pKa = 7.08LLQEE657 pKa = 4.58QATPPPFKK665 pKa = 10.59KK666 pKa = 10.05PRR668 pKa = 11.84TEE670 pKa = 3.94DD671 pKa = 3.19QEE673 pKa = 4.38EE674 pKa = 4.27NPEE677 pKa = 4.07EE678 pKa = 4.2TTQLQLFQEE687 pKa = 4.63LQRR690 pKa = 11.84QRR692 pKa = 11.84EE693 pKa = 4.11LQLQLKK699 pKa = 9.86RR700 pKa = 11.84GFRR703 pKa = 11.84GLVEE707 pKa = 4.32EE708 pKa = 4.65MIKK711 pKa = 9.06SHH713 pKa = 6.32RR714 pKa = 11.84HH715 pKa = 4.74LALDD719 pKa = 4.69PYY721 pKa = 11.19LKK723 pKa = 10.77

Molecular weight: 85.39 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

945

86

723

315.0

36.38

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.81 ± 1.197

1.27 ± 0.326

3.598 ± 0.547

5.926 ± 1.23

2.54 ± 0.719

7.407 ± 4.262

2.328 ± 0.481

3.492 ± 1.318

6.032 ± 1.99

10.37 ± 1.028

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.434 ± 0.58

4.021 ± 0.451

7.937 ± 2.321

4.868 ± 0.708

9.947 ± 1.402

7.407 ± 4.841

5.608 ± 1.061

4.444 ± 0.892

2.434 ± 0.326

4.127 ± 1.878
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski