Sousa chinensis (Indo-pacific humpbacked dolphin) (Steno chinensis)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha;

Average proteome isoelectric point is 6.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8382 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A484GJH0|A0A484GJH0_SOUCH Uncharacterized protein (Fragment) OS=Sousa chinensis OX=103600 GN=DBR06_SOUSAS21710040 PE=4 SV=1
SS1 pKa = 7.26SSPDD5 pKa = 2.94MDD7 pKa = 3.5FQEE10 pKa = 4.28EE11 pKa = 4.02NQYY14 pKa = 11.24DD15 pKa = 3.92VSVDD19 pKa = 3.25ILPEE23 pKa = 3.78EE24 pKa = 4.31DD25 pKa = 3.51RR26 pKa = 11.84QMDD29 pKa = 3.47MHH31 pKa = 7.13VSLSSFPCSLPQVFSPHH48 pKa = 6.33CVSSCGQVHH57 pKa = 5.5TEE59 pKa = 3.97EE60 pKa = 5.17GPPEE64 pKa = 4.35SSEE67 pKa = 4.36SPAQLRR73 pKa = 11.84QDD75 pKa = 3.88PLTGSGDD82 pKa = 3.92SLPSCTTEE90 pKa = 4.94DD91 pKa = 3.7SIKK94 pKa = 11.04

Molecular weight: 10.23 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A484H7F9|A0A484H7F9_SOUCH Uncharacterized protein OS=Sousa chinensis OX=103600 GN=DBR06_SOUSAS1610342 PE=4 SV=1
SS1 pKa = 7.35LVVQWVGFRR10 pKa = 11.84TPKK13 pKa = 10.43ARR15 pKa = 11.84GPGSILGRR23 pKa = 11.84GTRR26 pKa = 11.84SRR28 pKa = 11.84MPQLRR33 pKa = 11.84VRR35 pKa = 11.84MPQLRR40 pKa = 3.5

Molecular weight: 4.55 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8382

0

8382

3876492

10

6853

462.5

51.44

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.145 ± 0.032

2.243 ± 0.026

4.764 ± 0.018

7.057 ± 0.041

3.61 ± 0.023

6.736 ± 0.042

2.58 ± 0.016

4.251 ± 0.026

5.652 ± 0.04

10.012 ± 0.043

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.052 ± 0.012

3.504 ± 0.023

6.429 ± 0.052

4.719 ± 0.028

5.78 ± 0.027

8.313 ± 0.035

5.235 ± 0.025

6.07 ± 0.025

1.221 ± 0.01

2.623 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski