Peanut chlorotic streak virus

Taxonomy: Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Caulimoviridae; Soymovirus

Average proteome isoelectric point is 7.44

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q84684|Q84684_9VIRU Putative cell-to-cell transport protein OS=Peanut chlorotic streak virus OX=35593 PE=4 SV=1
MM1 pKa = 7.74EE2 pKa = 7.07DD3 pKa = 3.06IFKK6 pKa = 10.16MISEE10 pKa = 4.32KK11 pKa = 10.56KK12 pKa = 9.45EE13 pKa = 3.72KK14 pKa = 10.41LKK16 pKa = 11.18EE17 pKa = 4.05EE18 pKa = 4.11IEE20 pKa = 4.38EE21 pKa = 4.11KK22 pKa = 10.39RR23 pKa = 11.84SLVSRR28 pKa = 11.84LQKK31 pKa = 10.43EE32 pKa = 4.04ISDD35 pKa = 4.02KK36 pKa = 11.03EE37 pKa = 4.26KK38 pKa = 10.73EE39 pKa = 4.03LSALSQTEE47 pKa = 3.74QSLGLSIKK55 pKa = 10.4KK56 pKa = 7.79EE57 pKa = 3.99QPEE60 pKa = 4.04KK61 pKa = 11.0LVIQSSSEE69 pKa = 3.98KK70 pKa = 10.0YY71 pKa = 10.4DD72 pKa = 3.35EE73 pKa = 4.1EE74 pKa = 4.2EE75 pKa = 3.75RR76 pKa = 11.84AKK78 pKa = 10.24RR79 pKa = 11.84YY80 pKa = 9.16YY81 pKa = 10.63VIYY84 pKa = 9.98NGPGKK89 pKa = 10.54GIYY92 pKa = 9.82DD93 pKa = 3.61EE94 pKa = 4.26WGKK97 pKa = 11.08ASLFITGVKK106 pKa = 10.09GIRR109 pKa = 11.84HH110 pKa = 5.96KK111 pKa = 11.09KK112 pKa = 9.36FLSKK116 pKa = 10.83KK117 pKa = 8.13EE118 pKa = 4.02AQDD121 pKa = 3.9SFNEE125 pKa = 4.12EE126 pKa = 3.71NKK128 pKa = 10.12EE129 pKa = 3.86AAKK132 pKa = 9.11TAEE135 pKa = 3.86VSKK138 pKa = 10.93AYY140 pKa = 10.41LEE142 pKa = 4.46KK143 pKa = 10.71LQSPKK148 pKa = 10.22PQTSRR153 pKa = 11.84MVNLGKK159 pKa = 10.11IPSPRR164 pKa = 11.84TIDD167 pKa = 4.27HH168 pKa = 7.03ILTKK172 pKa = 10.6ADD174 pKa = 3.62LQEE177 pKa = 4.26KK178 pKa = 10.48ARR180 pKa = 11.84LTKK183 pKa = 10.31KK184 pKa = 10.34IYY186 pKa = 10.53DD187 pKa = 4.08DD188 pKa = 5.82DD189 pKa = 5.0YY190 pKa = 11.48MFLKK194 pKa = 10.36KK195 pKa = 10.9YY196 pKa = 10.82SDD198 pKa = 4.06DD199 pKa = 4.16DD200 pKa = 4.04KK201 pKa = 10.96QTSIYY206 pKa = 10.07PVDD209 pKa = 4.23SKK211 pKa = 11.88SLGAKK216 pKa = 9.82AVVLPEE222 pKa = 4.12ADD224 pKa = 3.58NIKK227 pKa = 10.02TYY229 pKa = 10.23MLYY232 pKa = 9.88QCGFIHH238 pKa = 8.03AIYY241 pKa = 9.91FKK243 pKa = 10.91SLDD246 pKa = 3.1IFRR249 pKa = 11.84YY250 pKa = 9.38FPEE253 pKa = 3.85NMKK256 pKa = 10.47RR257 pKa = 11.84AIQVYY262 pKa = 7.61AQRR265 pKa = 11.84MLKK268 pKa = 10.24AEE270 pKa = 3.8KK271 pKa = 10.48GMRR274 pKa = 11.84EE275 pKa = 3.96GFLRR279 pKa = 11.84IYY281 pKa = 9.06STNPEE286 pKa = 3.89FDD288 pKa = 3.08EE289 pKa = 4.69SGEE292 pKa = 4.25VVQPAIQLCQIGGSNSNYY310 pKa = 9.34PVMGVIEE317 pKa = 4.92DD318 pKa = 3.66VDD320 pKa = 3.58EE321 pKa = 5.35LEE323 pKa = 5.23AFLHH327 pKa = 6.11NYY329 pKa = 8.77TYY331 pKa = 10.97ILQKK335 pKa = 10.59GISVQGRR342 pKa = 11.84INYY345 pKa = 7.89SAKK348 pKa = 9.65STIIWSQQARR358 pKa = 11.84KK359 pKa = 9.14PSEE362 pKa = 3.55QDD364 pKa = 2.89IQILTEE370 pKa = 3.84FLLRR374 pKa = 11.84TVKK377 pKa = 10.95NEE379 pKa = 3.79FNFSAEE385 pKa = 4.25VKK387 pKa = 10.59QEE389 pKa = 3.18ICLRR393 pKa = 11.84LQRR396 pKa = 11.84DD397 pKa = 3.53FSEE400 pKa = 4.75DD401 pKa = 3.62HH402 pKa = 6.35VCQLCEE408 pKa = 3.87QSSGDD413 pKa = 3.62LEE415 pKa = 4.81PIKK418 pKa = 10.89EE419 pKa = 4.12EE420 pKa = 4.01

Molecular weight: 48.52 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q84683|Q84683_9VIRU Inclusion body matrix protein OS=Peanut chlorotic streak virus OX=35593 PE=3 SV=1
MM1 pKa = 7.4SSKK4 pKa = 10.39NSSFIKK10 pKa = 10.3VKK12 pKa = 10.72LFNKK16 pKa = 9.87YY17 pKa = 9.79LYY19 pKa = 10.6AYY21 pKa = 8.69IDD23 pKa = 3.55TGATICLAQAKK34 pKa = 9.36ILPIKK39 pKa = 9.34YY40 pKa = 7.09WKK42 pKa = 10.7KK43 pKa = 8.3MIKK46 pKa = 9.22PIKK49 pKa = 10.24VRR51 pKa = 11.84IANNKK56 pKa = 8.65VIHH59 pKa = 6.15IWYY62 pKa = 9.43KK63 pKa = 10.83AVDD66 pKa = 4.05LVLLLEE72 pKa = 4.96GKK74 pKa = 10.1RR75 pKa = 11.84FPLPSVYY82 pKa = 10.23QQDD85 pKa = 3.23AGLPLILGNNFLKK98 pKa = 10.69LYY100 pKa = 10.68NPFIQTLEE108 pKa = 4.37TISLRR113 pKa = 11.84CPQLEE118 pKa = 4.25KK119 pKa = 10.77QPSSLITTKK128 pKa = 10.17IYY130 pKa = 9.9NTFSLFGGVIVNILKK145 pKa = 8.76QQIYY149 pKa = 9.92IAIEE153 pKa = 4.13DD154 pKa = 4.16EE155 pKa = 4.4VTQLLEE161 pKa = 4.99AICSQNPLDD170 pKa = 3.89PQKK173 pKa = 11.03NRR175 pKa = 11.84NQIIVHH181 pKa = 6.7IDD183 pKa = 3.67LIDD186 pKa = 3.57PTKK189 pKa = 10.49EE190 pKa = 3.76VNVPNRR196 pKa = 11.84IPYY199 pKa = 5.78TQKK202 pKa = 10.96DD203 pKa = 2.86IDD205 pKa = 3.81EE206 pKa = 4.52FRR208 pKa = 11.84EE209 pKa = 4.15EE210 pKa = 3.76TSKK213 pKa = 11.08QIEE216 pKa = 4.26LGILRR221 pKa = 11.84QSKK224 pKa = 10.15SPHH227 pKa = 5.9SAPAFYY233 pKa = 10.93VEE235 pKa = 3.96NHH237 pKa = 5.76NEE239 pKa = 3.48IKK241 pKa = 10.17RR242 pKa = 11.84GKK244 pKa = 9.21RR245 pKa = 11.84RR246 pKa = 11.84LVINYY251 pKa = 9.15KK252 pKa = 8.7MNKK255 pKa = 7.06ATKK258 pKa = 9.82GDD260 pKa = 3.77AYY262 pKa = 11.35NLDD265 pKa = 3.65RR266 pKa = 11.84LYY268 pKa = 10.78LTDD271 pKa = 5.48RR272 pKa = 11.84EE273 pKa = 4.8SNWFSTLDD281 pKa = 3.42AKK283 pKa = 11.03SGFLQLRR290 pKa = 11.84LDD292 pKa = 4.26EE293 pKa = 4.27EE294 pKa = 4.85TKK296 pKa = 10.59PLTAFSCPPQMHH308 pKa = 6.83LEE310 pKa = 4.16YY311 pKa = 10.94NVMPMGLKK319 pKa = 9.34QAPSQFQRR327 pKa = 11.84FMDD330 pKa = 3.77NNLRR334 pKa = 11.84GLEE337 pKa = 4.71DD338 pKa = 3.16ISLAYY343 pKa = 9.58IDD345 pKa = 5.51DD346 pKa = 4.58IIVFTKK352 pKa = 9.22GTKK355 pKa = 9.64DD356 pKa = 3.32YY357 pKa = 10.9HH358 pKa = 6.46LKK360 pKa = 9.84QVARR364 pKa = 11.84VLIQLGNHH372 pKa = 5.35GVILSKK378 pKa = 10.84EE379 pKa = 3.81KK380 pKa = 10.98AKK382 pKa = 10.56IAFEE386 pKa = 4.34EE387 pKa = 4.55IEE389 pKa = 4.1FLGLKK394 pKa = 9.3ILKK397 pKa = 10.13NGFIEE402 pKa = 4.34PQKK405 pKa = 11.02HH406 pKa = 5.37LLEE409 pKa = 5.37KK410 pKa = 10.15IAEE413 pKa = 4.44FPDD416 pKa = 3.22QLQDD420 pKa = 2.92RR421 pKa = 11.84KK422 pKa = 10.55QIQKK426 pKa = 10.4FLGCLNYY433 pKa = 9.87IGEE436 pKa = 4.24KK437 pKa = 10.95GFFKK441 pKa = 10.68EE442 pKa = 3.76LAKK445 pKa = 10.27EE446 pKa = 4.02RR447 pKa = 11.84KK448 pKa = 9.07VLQKK452 pKa = 9.88MLSEE456 pKa = 4.03KK457 pKa = 10.8LPWKK461 pKa = 9.99WNDD464 pKa = 3.19LATLAVKK471 pKa = 10.36RR472 pKa = 11.84LKK474 pKa = 9.98QVCKK478 pKa = 10.14NLPRR482 pKa = 11.84LYY484 pKa = 10.09VAKK487 pKa = 10.36PSDD490 pKa = 4.22LLILTTDD497 pKa = 3.8ASDD500 pKa = 3.93TTWGAVLMAVPNAYY514 pKa = 9.9EE515 pKa = 4.01EE516 pKa = 4.31FLSFVTNNRR525 pKa = 11.84PSDD528 pKa = 3.38LKK530 pKa = 10.34TFLKK534 pKa = 10.46QKK536 pKa = 9.66EE537 pKa = 4.34GSSRR541 pKa = 11.84YY542 pKa = 9.41AEE544 pKa = 3.82KK545 pKa = 10.63SVPEE549 pKa = 4.6KK550 pKa = 10.64LNSMHH555 pKa = 7.21DD556 pKa = 3.36KK557 pKa = 10.82SHH559 pKa = 6.41GEE561 pKa = 3.77KK562 pKa = 10.49AEE564 pKa = 4.2KK565 pKa = 10.23SVSRR569 pKa = 11.84QTSQGRR575 pKa = 11.84SSSQSQQSYY584 pKa = 9.56IGSFMITKK592 pKa = 9.41WSSGTFKK599 pKa = 10.45PAEE602 pKa = 4.0EE603 pKa = 4.68NYY605 pKa = 9.09TVHH608 pKa = 6.7EE609 pKa = 4.49KK610 pKa = 10.86EE611 pKa = 4.29LLAFVNALKK620 pKa = 10.66KK621 pKa = 10.29FQIDD625 pKa = 3.5LRR627 pKa = 11.84PVKK630 pKa = 10.54FIFQTDD636 pKa = 3.66NSWVQGFLVNKK647 pKa = 10.34LKK649 pKa = 9.5EE650 pKa = 4.13TYY652 pKa = 10.3NRR654 pKa = 11.84GRR656 pKa = 11.84LARR659 pKa = 11.84WSMFIQQFDD668 pKa = 4.72FISLHH673 pKa = 5.62IAGKK677 pKa = 9.99EE678 pKa = 3.73NYY680 pKa = 9.95LADD683 pKa = 3.61TLTRR687 pKa = 11.84EE688 pKa = 4.4WKK690 pKa = 8.93TSSRR694 pKa = 3.78

Molecular weight: 80.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1896

320

694

474.0

54.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.325 ± 0.623

1.53 ± 0.427

5.222 ± 0.421

8.228 ± 0.875

3.956 ± 0.455

4.483 ± 0.127

1.319 ± 0.222

8.07 ± 0.897

9.968 ± 0.544

9.124 ± 0.901

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.741 ± 0.139

5.063 ± 0.49

4.061 ± 0.317

6.013 ± 0.212

5.38 ± 0.635

6.909 ± 0.567

4.747 ± 0.354

4.641 ± 0.611

0.844 ± 0.262

4.378 ± 0.565
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski