Bovine papillomavirus type 5

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Epsilonpapillomavirus

Average proteome isoelectric point is 7.14

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q8BDG4|VE2_BPV5 Regulatory protein E2 OS=Bovine papillomavirus type 5 OX=40537 GN=E2 PE=3 SV=1
MM1 pKa = 7.53AVRR4 pKa = 11.84LRR6 pKa = 11.84RR7 pKa = 11.84VKK9 pKa = 10.35RR10 pKa = 11.84ANPYY14 pKa = 10.57DD15 pKa = 4.17LYY17 pKa = 9.98RR18 pKa = 11.84TCATGDD24 pKa = 3.64CPQDD28 pKa = 3.23VKK30 pKa = 11.53DD31 pKa = 3.89RR32 pKa = 11.84FEE34 pKa = 5.45HH35 pKa = 5.4NTIADD40 pKa = 4.66KK41 pKa = 10.59ILKK44 pKa = 8.59WGSAGVFLGGLGIGSTQARR63 pKa = 11.84PGLGTYY69 pKa = 10.29SPLGRR74 pKa = 11.84GGVTGRR80 pKa = 11.84IPVRR84 pKa = 11.84GPGSTRR90 pKa = 11.84PLGRR94 pKa = 11.84PFSSGPIDD102 pKa = 3.6TIGAGVRR109 pKa = 11.84TSVEE113 pKa = 4.01TSVTVPDD120 pKa = 4.04VVAVLPEE127 pKa = 4.29SPAVITPDD135 pKa = 3.88SMPVDD140 pKa = 4.08PGVGGLDD147 pKa = 3.01ISAEE151 pKa = 4.08IIEE154 pKa = 4.65EE155 pKa = 4.01PSLTFVEE162 pKa = 4.28PHH164 pKa = 6.23GPEE167 pKa = 4.02DD168 pKa = 4.12VAVLDD173 pKa = 4.23VNPAEE178 pKa = 4.84HH179 pKa = 7.09DD180 pKa = 3.46RR181 pKa = 11.84SVYY184 pKa = 10.38LSSSTTHH191 pKa = 6.51HH192 pKa = 6.23NPSFQGQVTVYY203 pKa = 9.67TDD205 pKa = 2.84IGEE208 pKa = 4.33TSEE211 pKa = 4.42TEE213 pKa = 3.7NLLISGSNIGSSRR226 pKa = 11.84GEE228 pKa = 4.17EE229 pKa = 3.54IQMQLFSGPKK239 pKa = 8.3TSTPEE244 pKa = 3.36TDD246 pKa = 3.01AVTKK250 pKa = 10.53VRR252 pKa = 11.84GRR254 pKa = 11.84ANWFSKK260 pKa = 10.24RR261 pKa = 11.84YY262 pKa = 6.12YY263 pKa = 8.41TQTSVRR269 pKa = 11.84DD270 pKa = 3.44PTFIQEE276 pKa = 4.09PQTYY280 pKa = 9.32FYY282 pKa = 11.25GFEE285 pKa = 4.1NPAYY289 pKa = 9.79EE290 pKa = 4.59PDD292 pKa = 3.74PFEE295 pKa = 6.54DD296 pKa = 3.81SFDD299 pKa = 3.72VQLASPSEE307 pKa = 4.02PVQPEE312 pKa = 3.94LRR314 pKa = 11.84DD315 pKa = 3.52ITHH318 pKa = 6.16VSAARR323 pKa = 11.84TFRR326 pKa = 11.84GEE328 pKa = 3.87SGRR331 pKa = 11.84VGISRR336 pKa = 11.84LGQKK340 pKa = 10.28SSIQTRR346 pKa = 11.84SGVTVGGRR354 pKa = 11.84VHH356 pKa = 6.78FRR358 pKa = 11.84YY359 pKa = 10.18SLSTIEE365 pKa = 5.63DD366 pKa = 4.37AIEE369 pKa = 4.1DD370 pKa = 3.6AGEE373 pKa = 4.2IEE375 pKa = 4.23LQVTNGSQGPSGSLQHH391 pKa = 5.73TAEE394 pKa = 4.74TILSEE399 pKa = 4.02GHH401 pKa = 6.66DD402 pKa = 3.81AYY404 pKa = 11.65VDD406 pKa = 3.29VDD408 pKa = 3.6MDD410 pKa = 4.51SVGSLYY416 pKa = 10.93SDD418 pKa = 3.2IDD420 pKa = 4.59LIDD423 pKa = 3.6EE424 pKa = 4.6HH425 pKa = 9.18SEE427 pKa = 4.23TPHH430 pKa = 6.79GILVFHH436 pKa = 7.53DD437 pKa = 3.81EE438 pKa = 4.54AEE440 pKa = 4.26TDD442 pKa = 3.88VVPVIDD448 pKa = 3.4VSYY451 pKa = 10.73VRR453 pKa = 11.84KK454 pKa = 8.86PLSTIPGSDD463 pKa = 3.37LWPTNINIQNGPVDD477 pKa = 4.07VDD479 pKa = 4.02LQDD482 pKa = 4.64SILPGIIITDD492 pKa = 3.59SGVDD496 pKa = 3.19GTYY499 pKa = 10.76FLNTYY504 pKa = 8.03LHH506 pKa = 6.92PSLHH510 pKa = 5.77KK511 pKa = 9.49RR512 pKa = 11.84KK513 pKa = 9.64KK514 pKa = 10.03RR515 pKa = 11.84RR516 pKa = 11.84FSS518 pKa = 3.23

Molecular weight: 56.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|P50806|VL1_BPV5 Major capsid protein L1 OS=Bovine papillomavirus type 5 OX=40537 GN=L1 PE=3 SV=2
MM1 pKa = 7.42KK2 pKa = 10.41LVMLLRR8 pKa = 11.84PPPQTHH14 pKa = 6.86RR15 pKa = 11.84ADD17 pKa = 3.83TTDD20 pKa = 3.7GLPGLQEE27 pKa = 4.02EE28 pKa = 4.84PRR30 pKa = 11.84GGDD33 pKa = 3.38GPTCSGPAPAIPDD46 pKa = 3.63SPSRR50 pKa = 11.84CLSRR54 pKa = 11.84GFAGRR59 pKa = 11.84DD60 pKa = 3.49PGCHH64 pKa = 5.94RR65 pKa = 11.84NRR67 pKa = 11.84HH68 pKa = 5.06RR69 pKa = 11.84VHH71 pKa = 7.06PYY73 pKa = 9.33ILSGGQRR80 pKa = 11.84ILVTSSSSSTVQGPLSSGSSQHH102 pKa = 5.05SQSRR106 pKa = 11.84GRR108 pKa = 11.84PPSPDD113 pKa = 2.95STEE116 pKa = 4.0TEE118 pKa = 4.12RR119 pKa = 11.84ARR121 pKa = 11.84TPVNSDD127 pKa = 3.05RR128 pKa = 11.84QRR130 pKa = 11.84AGEE133 pKa = 3.86FDD135 pKa = 4.13LLKK138 pKa = 10.79GGCRR142 pKa = 11.84PCCLIEE148 pKa = 4.36GNGNKK153 pKa = 9.29VKK155 pKa = 10.69CLRR158 pKa = 11.84FRR160 pKa = 11.84LKK162 pKa = 10.15KK163 pKa = 8.19SHH165 pKa = 7.09RR166 pKa = 11.84SRR168 pKa = 11.84FLDD171 pKa = 2.91ITTTFWATGDD181 pKa = 3.83EE182 pKa = 4.54GSDD185 pKa = 3.23RR186 pKa = 11.84QGNGTILITFTDD198 pKa = 3.66TTQRR202 pKa = 11.84DD203 pKa = 3.79LFLGSVSIPGEE214 pKa = 3.67LSVRR218 pKa = 11.84RR219 pKa = 11.84ITISTDD225 pKa = 2.54

Molecular weight: 24.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2530

124

626

361.4

40.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.889 ± 0.678

2.609 ± 0.698

6.166 ± 0.303

5.178 ± 0.321

3.992 ± 0.4

7.51 ± 0.889

2.332 ± 0.325

4.111 ± 0.568

4.822 ± 0.877

8.735 ± 0.624

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.581 ± 0.338

3.913 ± 0.751

6.403 ± 0.79

4.743 ± 0.483

6.482 ± 0.836

8.656 ± 0.885

6.443 ± 0.796

6.126 ± 0.72

1.304 ± 0.277

3.004 ± 0.525
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski