Sea otter poxvirus

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Mustelpoxvirus; Sea otterpox virus

Average proteome isoelectric point is 6.88

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 130 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2U9QHV2|A0A2U9QHV2_9POXV Uncharacterized protein OS=Sea otter poxvirus OX=1416741 GN=SOPV-ELK-128 PE=4 SV=1
MM1 pKa = 7.27TFIHH5 pKa = 6.86EE6 pKa = 4.18NDD8 pKa = 2.92IHH10 pKa = 5.78NTDD13 pKa = 4.4KK14 pKa = 10.91ISEE17 pKa = 4.01QSQYY21 pKa = 10.84DD22 pKa = 3.54TMDD25 pKa = 3.2VVEE28 pKa = 4.6YY29 pKa = 10.86GVIFPEE35 pKa = 5.55LYY37 pKa = 10.63NKK39 pKa = 10.43LDD41 pKa = 3.38TDD43 pKa = 4.37ANDD46 pKa = 5.54SIDD49 pKa = 4.93DD50 pKa = 4.06NNKK53 pKa = 9.08PAAKK57 pKa = 10.38ANIHH61 pKa = 5.86EE62 pKa = 5.07NIDD65 pKa = 3.66NYY67 pKa = 11.51NEE69 pKa = 4.19TEE71 pKa = 4.23DD72 pKa = 3.86EE73 pKa = 4.2NTNVKK78 pKa = 10.46CSGIKK83 pKa = 9.96KK84 pKa = 10.39LNDD87 pKa = 2.97NEE89 pKa = 4.47YY90 pKa = 10.24IVAIDD95 pKa = 3.24ICSNDD100 pKa = 2.77GTTNQTSSINGLVLYY115 pKa = 8.59FAVTINGKK123 pKa = 8.28NN124 pKa = 3.08

Molecular weight: 13.93 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2U9QHV6|A0A2U9QHV6_9POXV IMV membrane protein OS=Sea otter poxvirus OX=1416741 GN=SOPV-ELK-107 PE=3 SV=1
MM1 pKa = 7.17IRR3 pKa = 11.84KK4 pKa = 7.44NTTYY8 pKa = 10.76NNKK11 pKa = 10.27LIVSAFDD18 pKa = 3.25IGVKK22 pKa = 10.43NPARR26 pKa = 11.84TVLEE30 pKa = 3.53IHH32 pKa = 6.05NNKK35 pKa = 8.64VRR37 pKa = 11.84ILDD40 pKa = 3.44ITKK43 pKa = 10.34LDD45 pKa = 3.48WSSNWEE51 pKa = 3.56QTIARR56 pKa = 11.84DD57 pKa = 3.07ITTYY61 pKa = 10.47ISDD64 pKa = 3.28IVLVEE69 pKa = 4.04RR70 pKa = 11.84QARR73 pKa = 11.84SSPYY77 pKa = 9.32IKK79 pKa = 9.95FVYY82 pKa = 9.88FIKK85 pKa = 10.73GLLYY89 pKa = 10.04NFPSKK94 pKa = 10.59VYY96 pKa = 10.0CVSPIMKK103 pKa = 9.88GSTYY107 pKa = 10.14RR108 pKa = 11.84YY109 pKa = 8.4RR110 pKa = 11.84KK111 pKa = 8.83HH112 pKa = 6.9RR113 pKa = 11.84SVKK116 pKa = 10.54LFLSWLQIFGIYY128 pKa = 9.32DD129 pKa = 3.28QNISKK134 pKa = 10.74KK135 pKa = 10.57KK136 pKa = 10.15LDD138 pKa = 4.02DD139 pKa = 3.78VADD142 pKa = 3.98SFNMAMRR149 pKa = 11.84YY150 pKa = 9.31ILTKK154 pKa = 10.68

Molecular weight: 18.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

130

0

130

39768

41

1286

305.9

35.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.815 ± 0.124

2.293 ± 0.145

6.229 ± 0.123

4.587 ± 0.12

4.657 ± 0.163

3.764 ± 0.15

2.484 ± 0.1

10.089 ± 0.173

6.857 ± 0.187

9.334 ± 0.2

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.665 ± 0.099

6.714 ± 0.135

3.299 ± 0.117

2.764 ± 0.096

4.277 ± 0.113

7.825 ± 0.123

6.759 ± 0.133

6.05 ± 0.146

0.631 ± 0.048

4.906 ± 0.132
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski