Aspergillus steynii IBT 23096
Average proteome isoelectric point is 6.45
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 12965 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A2I2G879|A0A2I2G879_9EURO Uncharacterized protein (Fragment) OS=Aspergillus steynii IBT 23096 OX=1392250 GN=P170DRAFT_358376 PE=4 SV=1
MM1 pKa = 7.49 SPAPLTTLLAAAASAPLLFSTGVSAQNATSRR32 pKa = 11.84 AQIAMDD38 pKa = 5.0 VLQTWYY44 pKa = 10.83 NGTSGIWDD52 pKa = 3.47 TCGWWNGANCLTTLADD68 pKa = 3.69 FAIADD73 pKa = 3.93 EE74 pKa = 4.58 SVNDD78 pKa = 3.77 AVVGVLGTTFKK89 pKa = 11.02 VATISNPIPEE99 pKa = 4.2 RR100 pKa = 11.84 SGDD103 pKa = 3.41 EE104 pKa = 4.43 FYY106 pKa = 11.22 NITDD110 pKa = 3.85 GTQAGSPDD118 pKa = 3.47 AYY120 pKa = 10.67 QWMDD124 pKa = 2.75 GSYY127 pKa = 11.38 DD128 pKa = 3.82 DD129 pKa = 4.97 DD130 pKa = 4.1 AWWALAWIAAYY141 pKa = 10.15 DD142 pKa = 3.71 VTDD145 pKa = 4.22 DD146 pKa = 6.04 DD147 pKa = 5.22 EE148 pKa = 5.06 YY149 pKa = 11.86 LDD151 pKa = 3.94 LAIGIFDD158 pKa = 4.27 RR159 pKa = 11.84 LSHH162 pKa = 6.03 TWPSKK167 pKa = 10.13 CGNGGIDD174 pKa = 3.06 SDD176 pKa = 4.34 YY177 pKa = 10.98 SHH179 pKa = 7.52 VYY181 pKa = 9.65 VNAVTNEE188 pKa = 3.93 LFFSVAAHH196 pKa = 6.54 LANRR200 pKa = 11.84 ASDD203 pKa = 3.39 SQYY206 pKa = 9.88 YY207 pKa = 9.52 VDD209 pKa = 3.33 WARR212 pKa = 11.84 RR213 pKa = 11.84 QWNWFNATGMINEE226 pKa = 4.69 NYY228 pKa = 8.39 TVNDD232 pKa = 4.04 GLTNDD237 pKa = 4.41 CANNGDD243 pKa = 4.43 TIWTYY248 pKa = 10.49 NQGVVIGGLAEE259 pKa = 3.95 LHH261 pKa = 6.2 RR262 pKa = 11.84 SVSNSSNSSYY272 pKa = 11.4 LDD274 pKa = 3.35 MAEE277 pKa = 4.88 KK278 pKa = 9.89 IAKK281 pKa = 10.16 ASIDD285 pKa = 3.6 EE286 pKa = 4.5 LADD289 pKa = 3.71 DD290 pKa = 4.35 NYY292 pKa = 10.75 VIRR295 pKa = 11.84 EE296 pKa = 4.17 SCEE299 pKa = 3.7 PDD301 pKa = 3.11 CDD303 pKa = 4.57 ANATQFKK310 pKa = 10.81 GIFIRR315 pKa = 11.84 NLKK318 pKa = 9.37 LLHH321 pKa = 6.55 SVAPDD326 pKa = 3.36 DD327 pKa = 4.43 VYY329 pKa = 11.64 EE330 pKa = 4.13 KK331 pKa = 10.77 VIRR334 pKa = 11.84 ACADD338 pKa = 3.88 SIWDD342 pKa = 3.69 NDD344 pKa = 3.76 RR345 pKa = 11.84 DD346 pKa = 3.8 EE347 pKa = 4.49 QNQFGINWAGPVSAIDD363 pKa = 3.74 ASTHH367 pKa = 5.38 SSAMDD372 pKa = 3.88 ALVAAIDD379 pKa = 3.73 EE380 pKa = 4.57 DD381 pKa = 4.01
Molecular weight: 41.59 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.719
IPC2_protein 3.846
IPC_protein 3.884
Toseland 3.643
ProMoST 4.037
Dawson 3.884
Bjellqvist 4.062
Wikipedia 3.846
Rodwell 3.706
Grimsley 3.554
Solomon 3.884
Lehninger 3.846
Nozaki 3.999
DTASelect 4.291
Thurlkill 3.706
EMBOSS 3.846
Sillero 4.012
Patrickios 0.922
IPC_peptide 3.872
IPC2_peptide 3.986
IPC2.peptide.svr19 3.901
Protein with the highest isoelectric point:
>tr|A0A2I2GGM0|A0A2I2GGM0_9EURO Putative apoptosis-inducing factor OS=Aspergillus steynii IBT 23096 OX=1392250 GN=P170DRAFT_348257 PE=4 SV=1
SS1 pKa = 6.85 HH2 pKa = 7.5 KK3 pKa = 10.71 SFRR6 pKa = 11.84 TKK8 pKa = 10.45 QKK10 pKa = 9.84 LAKK13 pKa = 9.55 AQKK16 pKa = 8.59 QNRR19 pKa = 11.84 PIPQWIRR26 pKa = 11.84 LRR28 pKa = 11.84 TGNTIRR34 pKa = 11.84 YY35 pKa = 5.79 NAKK38 pKa = 8.89 RR39 pKa = 11.84 RR40 pKa = 11.84 HH41 pKa = 4.14 WRR43 pKa = 11.84 KK44 pKa = 7.41 TRR46 pKa = 11.84 LGII49 pKa = 4.46
Molecular weight: 6.03 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.39
IPC2_protein 11.052
IPC_protein 12.398
Toseland 12.559
ProMoST 13.042
Dawson 12.559
Bjellqvist 12.544
Wikipedia 13.027
Rodwell 12.34
Grimsley 12.603
Solomon 13.056
Lehninger 12.954
Nozaki 12.559
DTASelect 12.544
Thurlkill 12.559
EMBOSS 13.056
Sillero 12.559
Patrickios 12.076
IPC_peptide 13.056
IPC2_peptide 12.032
IPC2.peptide.svr19 9.006
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
12963
2
12965
6073799
49
7729
468.5
51.89
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.406 ± 0.019
1.329 ± 0.008
5.683 ± 0.016
6.005 ± 0.022
3.882 ± 0.012
6.903 ± 0.016
2.478 ± 0.008
4.917 ± 0.015
4.407 ± 0.017
9.175 ± 0.021
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.18 ± 0.008
3.576 ± 0.01
6.099 ± 0.024
4.012 ± 0.014
6.171 ± 0.019
8.369 ± 0.022
5.796 ± 0.014
6.258 ± 0.016
1.52 ± 0.008
2.834 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here