Torque teno zalophus virus 1 (ZcTTV)

Taxonomy: Viruses; Anelloviridae; Lambdatorquevirus; Torque teno pinniped virus 5

Average proteome isoelectric point is 6.3

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C0JSK8|C0JSK8_ZCTTV Capsid protein OS=Torque teno zalophus virus 1 OX=1218490 PE=3 SV=1
MM1 pKa = 7.72EE2 pKa = 6.87DD3 pKa = 4.76IRR5 pKa = 11.84TLWKK9 pKa = 9.31VTFDD13 pKa = 4.21LLYY16 pKa = 10.73DD17 pKa = 3.63NNYY20 pKa = 9.52FPSTGMYY27 pKa = 9.48PCFDD31 pKa = 3.59EE32 pKa = 6.91KK33 pKa = 11.03EE34 pKa = 4.09ICLCLAWTLLLIGFSTLLILTIQLIISVRR63 pKa = 11.84RR64 pKa = 11.84LNGSVNALISIKK76 pKa = 10.6NSAGVVTGQTISPKK90 pKa = 9.83NAISEE95 pKa = 4.24EE96 pKa = 4.25VQAPEE101 pKa = 4.08MEE103 pKa = 4.34EE104 pKa = 3.96TLQEE108 pKa = 4.23VPLSEE113 pKa = 4.24EE114 pKa = 4.21SPLVGAQTQKK124 pKa = 10.07MASPTKK130 pKa = 9.54NACGKK135 pKa = 10.08IPSFF139 pKa = 4.32

Molecular weight: 15.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C0JSK9|C0JSK9_ZCTTV Orf3 OS=Torque teno zalophus virus 1 OX=1218490 PE=4 SV=1
MM1 pKa = 7.66PFRR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84FRR8 pKa = 11.84RR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84WRR13 pKa = 11.84RR14 pKa = 11.84PFRR17 pKa = 11.84RR18 pKa = 11.84YY19 pKa = 8.63HH20 pKa = 4.7YY21 pKa = 10.11RR22 pKa = 11.84RR23 pKa = 11.84NRR25 pKa = 11.84HH26 pKa = 2.89WWGRR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84RR33 pKa = 11.84KK34 pKa = 7.62WRR36 pKa = 11.84HH37 pKa = 4.46RR38 pKa = 11.84RR39 pKa = 11.84RR40 pKa = 11.84MPAVRR45 pKa = 11.84YY46 pKa = 9.21HH47 pKa = 6.37PSRR50 pKa = 11.84RR51 pKa = 11.84HH52 pKa = 4.91KK53 pKa = 10.46YY54 pKa = 8.39IVIRR58 pKa = 11.84GIEE61 pKa = 4.05PLGNLCTDD69 pKa = 4.36HH70 pKa = 6.35TPSWLRR76 pKa = 11.84ATPGRR81 pKa = 11.84SFEE84 pKa = 4.56SAGQTLGEE92 pKa = 4.27WEE94 pKa = 4.56GTWGAHH100 pKa = 4.21HH101 pKa = 6.92HH102 pKa = 6.23SFAGLLLRR110 pKa = 11.84AQCRR114 pKa = 11.84FATFSGDD121 pKa = 2.86WKK123 pKa = 10.58SYY125 pKa = 11.12DD126 pKa = 3.46YY127 pKa = 11.03IEE129 pKa = 4.42YY130 pKa = 10.48KK131 pKa = 10.77GGTFYY136 pKa = 10.66IPPQCTTFLFGIDD149 pKa = 3.54PQFTKK154 pKa = 10.35ISKK157 pKa = 9.86EE158 pKa = 4.14GEE160 pKa = 3.82KK161 pKa = 10.2EE162 pKa = 4.06QPNEE166 pKa = 4.2EE167 pKa = 4.25TWLHH171 pKa = 6.03PGWLLHH177 pKa = 6.16QRR179 pKa = 11.84GTHH182 pKa = 6.25IIYY185 pKa = 10.87SKK187 pKa = 10.44DD188 pKa = 2.9IKK190 pKa = 10.13PWRR193 pKa = 11.84RR194 pKa = 11.84WYY196 pKa = 10.45KK197 pKa = 10.65LRR199 pKa = 11.84VKK201 pKa = 10.31PGPTWEE207 pKa = 4.83GPYY210 pKa = 10.35SLPNAFNFIMSQWWWSWLDD229 pKa = 3.49FQHH232 pKa = 7.16AFEE235 pKa = 6.04DD236 pKa = 3.75NTRR239 pKa = 11.84SQICHH244 pKa = 7.2ADD246 pKa = 3.47PQNFSLFCGQKK257 pKa = 9.56PWWFDD262 pKa = 3.07STYY265 pKa = 10.72KK266 pKa = 9.46NTIEE270 pKa = 3.91IPKK273 pKa = 9.93RR274 pKa = 11.84LVNKK278 pKa = 10.11ACNAWVNRR286 pKa = 11.84QEE288 pKa = 3.89YY289 pKa = 8.69MIKK292 pKa = 9.84IGQKK296 pKa = 8.49VTDD299 pKa = 4.03KK300 pKa = 10.31MLHH303 pKa = 6.27PEE305 pKa = 4.66DD306 pKa = 6.37DD307 pKa = 3.94ILCGNQSQQSQKK319 pKa = 11.09KK320 pKa = 9.14YY321 pKa = 10.18FQQQNPGWGPFLPLLYY337 pKa = 11.01NGDD340 pKa = 3.91NCSLWFKK347 pKa = 10.25YY348 pKa = 10.13RR349 pKa = 11.84YY350 pKa = 8.45VFKK353 pKa = 11.23VSGDD357 pKa = 3.36CEE359 pKa = 4.18YY360 pKa = 11.14RR361 pKa = 11.84KK362 pKa = 8.04TPSTDD367 pKa = 2.87LTQMVPTAPGPWNAEE382 pKa = 3.34GDD384 pKa = 3.78RR385 pKa = 11.84PQIQSRR391 pKa = 11.84SILKK395 pKa = 10.22KK396 pKa = 9.43SRR398 pKa = 11.84KK399 pKa = 9.29RR400 pKa = 11.84PLDD403 pKa = 3.34TADD406 pKa = 3.71ILLGDD411 pKa = 4.11TDD413 pKa = 5.57DD414 pKa = 6.14GILTEE419 pKa = 4.52TGLEE423 pKa = 4.24RR424 pKa = 11.84ISGPSPKK431 pKa = 10.28DD432 pKa = 3.3LLCGMEE438 pKa = 4.04NTPPKK443 pKa = 9.96RR444 pKa = 11.84VRR446 pKa = 11.84FRR448 pKa = 11.84QSDD451 pKa = 3.74VLRR454 pKa = 11.84KK455 pKa = 9.37HH456 pKa = 5.66KK457 pKa = 10.3HH458 pKa = 5.95RR459 pKa = 11.84ILNLIDD465 pKa = 3.27QLSRR469 pKa = 3.35

Molecular weight: 56.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

770

139

469

256.7

29.91

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.636 ± 0.582

1.948 ± 0.435

4.545 ± 0.532

5.974 ± 1.467

4.026 ± 0.814

5.844 ± 0.867

3.117 ± 0.854

5.325 ± 0.985

5.714 ± 0.593

8.182 ± 1.107

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.948 ± 0.386

3.896 ± 0.345

6.494 ± 0.658

5.974 ± 1.049

7.532 ± 2.624

8.182 ± 2.359

7.143 ± 1.483

3.506 ± 0.978

3.506 ± 1.176

3.506 ± 0.379
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski