Ustilaginoidea virens RNA virus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; Victorivirus; unclassified Victorivirus

Average proteome isoelectric point is 6.44

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|M9QS71|M9QS71_9VIRU Putative coat protein OS=Ustilaginoidea virens RNA virus 1 OX=1312445 PE=4 SV=1
MM1 pKa = 7.34SALSTFLSGGVVAKK15 pKa = 10.88GPLKK19 pKa = 9.87NNEE22 pKa = 3.24VRR24 pKa = 11.84RR25 pKa = 11.84YY26 pKa = 6.98YY27 pKa = 8.24TTLISEE33 pKa = 4.17ATLNGVQDD41 pKa = 3.83VAGKK45 pKa = 7.52TVVWKK50 pKa = 10.67VGYY53 pKa = 9.9AYY55 pKa = 10.73SGTAGIDD62 pKa = 3.18YY63 pKa = 10.79DD64 pKa = 4.19GVYY67 pKa = 10.04KK68 pKa = 10.56IHH70 pKa = 6.69AEE72 pKa = 4.08KK73 pKa = 10.9VRR75 pKa = 11.84ADD77 pKa = 3.46PKK79 pKa = 10.8AYY81 pKa = 9.64PNSKK85 pKa = 9.67KK86 pKa = 10.37RR87 pKa = 11.84NEE89 pKa = 4.06LLKK92 pKa = 10.43PLIRR96 pKa = 11.84EE97 pKa = 4.43AYY99 pKa = 8.33NLKK102 pKa = 10.66DD103 pKa = 3.84SEE105 pKa = 4.39EE106 pKa = 4.31LPIPAALVCPKK117 pKa = 10.27SVAIRR122 pKa = 11.84LQTPYY127 pKa = 9.93PVNEE131 pKa = 4.72AISAEE136 pKa = 4.07FANAARR142 pKa = 11.84RR143 pKa = 11.84YY144 pKa = 8.36SGVVGTHH151 pKa = 5.46GTADD155 pKa = 3.21FCGIVAQLAKK165 pKa = 10.52GLAFFASTGGLTMRR179 pKa = 11.84DD180 pKa = 3.27LAGGNSYY187 pKa = 11.29SYY189 pKa = 9.98MAVGNHH195 pKa = 5.33TAPLVASTTSIWVPRR210 pKa = 11.84YY211 pKa = 9.92AEE213 pKa = 4.33SLMAPNIMAALVAAGSAVGSTIVTDD238 pKa = 4.5LLPTDD243 pKa = 3.75VTNTPLLTEE252 pKa = 4.47ANHH255 pKa = 6.62LEE257 pKa = 4.21LAAGVYY263 pKa = 9.56HH264 pKa = 7.51ALRR267 pKa = 11.84VLGTNMEE274 pKa = 4.42ANGAGQLFAYY284 pKa = 9.7AVTVGIHH291 pKa = 5.33SVVTVVGMTDD301 pKa = 2.73EE302 pKa = 4.44GAYY305 pKa = 9.32MRR307 pKa = 11.84DD308 pKa = 3.47VFRR311 pKa = 11.84STSFAPSYY319 pKa = 11.02GGISTVLPEE328 pKa = 3.73WHH330 pKa = 6.7GFPRR334 pKa = 11.84PADD337 pKa = 3.38SSLAGWVGLVDD348 pKa = 5.48SIALGTAASVAIADD362 pKa = 3.92PCVAIADD369 pKa = 4.31RR370 pKa = 11.84YY371 pKa = 10.67YY372 pKa = 9.48PTTLTGRR379 pKa = 11.84YY380 pKa = 8.77EE381 pKa = 4.16YY382 pKa = 10.94GGEE385 pKa = 3.88PGMGYY390 pKa = 10.38VGDD393 pKa = 4.26EE394 pKa = 3.66NDD396 pKa = 3.41ARR398 pKa = 11.84IISGKK403 pKa = 9.96IMQLAPSFTRR413 pKa = 11.84NYY415 pKa = 9.92FKK417 pKa = 11.13VLARR421 pKa = 11.84LFSVTPHH428 pKa = 6.34EE429 pKa = 4.39NSSVGLTHH437 pKa = 7.13MIHH440 pKa = 6.61AFSSEE445 pKa = 3.89TLRR448 pKa = 11.84DD449 pKa = 3.69SRR451 pKa = 11.84HH452 pKa = 5.41LQHH455 pKa = 6.99PSVSPFYY462 pKa = 9.42WVEE465 pKa = 3.5PTGIITFDD473 pKa = 3.36TSDD476 pKa = 3.62FTATAAGFGTLATPSQPGTIPMFEE500 pKa = 4.07RR501 pKa = 11.84AEE503 pKa = 4.14VTQNVGDD510 pKa = 3.88VSDD513 pKa = 4.64VLVAWRR519 pKa = 11.84SARR522 pKa = 11.84TSGLAIHH529 pKa = 6.92LNNHH533 pKa = 5.15VEE535 pKa = 4.09AGMEE539 pKa = 4.29NIRR542 pKa = 11.84ITGCDD547 pKa = 3.59PNSWAQLGGASQSVSNRR564 pKa = 11.84VTAGNDD570 pKa = 2.93LASYY574 pKa = 8.2MWARR578 pKa = 11.84SDD580 pKa = 3.56VGVPAPGEE588 pKa = 3.73AMYY591 pKa = 10.69LGEE594 pKa = 5.39AISLLVRR601 pKa = 11.84HH602 pKa = 6.32DD603 pKa = 3.96TLDD606 pKa = 3.54GNTWANTPNHH616 pKa = 5.92VPRR619 pKa = 11.84DD620 pKa = 3.71VEE622 pKa = 4.07FGNNVTIRR630 pKa = 11.84VGLLAPYY637 pKa = 9.96GVGPIGPNRR646 pKa = 11.84KK647 pKa = 9.44ANRR650 pKa = 11.84AFTAALRR657 pKa = 11.84ALDD660 pKa = 3.75AARR663 pKa = 11.84EE664 pKa = 4.22SGMIRR669 pKa = 11.84APKK672 pKa = 10.1LCGTIKK678 pKa = 10.29LTDD681 pKa = 3.37QAFGRR686 pKa = 11.84QAAVPVAIAPPSPKK700 pKa = 10.04AANRR704 pKa = 11.84PVTTVSQPPQSDD716 pKa = 3.25ARR718 pKa = 11.84PVEE721 pKa = 3.98PQNYY725 pKa = 9.03AEE727 pKa = 4.9SPTAHH732 pKa = 7.06VYY734 pKa = 8.2TQGPKK739 pKa = 8.66TAPGPAQSVIASVRR753 pKa = 11.84QMAAEE758 pKa = 4.31EE759 pKa = 4.2SAEE762 pKa = 4.27TASVAAAPQAGAAQQ776 pKa = 3.55

Molecular weight: 81.9 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|M9QS71|M9QS71_9VIRU Putative coat protein OS=Ustilaginoidea virens RNA virus 1 OX=1312445 PE=4 SV=1
MM1 pKa = 7.37EE2 pKa = 4.67SAAVRR7 pKa = 11.84ANEE10 pKa = 3.84LGAYY14 pKa = 8.9GHH16 pKa = 7.0ALLRR20 pKa = 11.84FLPPSEE26 pKa = 4.32VCDD29 pKa = 5.17DD30 pKa = 3.28IAMSNTDD37 pKa = 4.1AQWHH41 pKa = 5.17MLGSLGTKK49 pKa = 9.3YY50 pKa = 10.98GYY52 pKa = 9.91ISQVACSLLVCNTPFQVMLHH72 pKa = 5.8EE73 pKa = 4.09RR74 pKa = 11.84HH75 pKa = 5.84IVEE78 pKa = 4.76LLHH81 pKa = 6.62LVKK84 pKa = 10.42PVLTPHH90 pKa = 6.82CEE92 pKa = 3.84YY93 pKa = 11.03DD94 pKa = 3.64VTSPCSACIEE104 pKa = 4.18LDD106 pKa = 3.27SLGRR110 pKa = 11.84VGPGSTVLAFKK121 pKa = 11.06GDD123 pKa = 3.61IAHH126 pKa = 6.47TKK128 pKa = 10.24CNIAFSDD135 pKa = 3.62AWVDD139 pKa = 3.53LCNNSPAIASQVQRR153 pKa = 11.84SGRR156 pKa = 11.84ALHH159 pKa = 6.63GCYY162 pKa = 9.66NDD164 pKa = 3.31QGTAIIMYY172 pKa = 7.82TAALFQHH179 pKa = 6.83LKK181 pKa = 11.05GEE183 pKa = 4.28AFPYY187 pKa = 9.95SYY189 pKa = 10.88HH190 pKa = 6.51FVRR193 pKa = 11.84NPHH196 pKa = 6.1DD197 pKa = 3.88AKK199 pKa = 11.11AFSTILKK206 pKa = 10.69AMGANATPLGSVLTEE221 pKa = 4.01ANTLTGRR228 pKa = 11.84GVNPIDD234 pKa = 3.55VEE236 pKa = 3.94AAGRR240 pKa = 11.84DD241 pKa = 3.09RR242 pKa = 11.84TQYY245 pKa = 11.52DD246 pKa = 3.66KK247 pKa = 10.88IVRR250 pKa = 11.84DD251 pKa = 3.93LFHH254 pKa = 8.02ADD256 pKa = 2.97EE257 pKa = 4.98GKK259 pKa = 10.39LRR261 pKa = 11.84EE262 pKa = 4.6AIRR265 pKa = 11.84TILRR269 pKa = 11.84EE270 pKa = 4.24EE271 pKa = 3.95IGSANVEE278 pKa = 4.29FPSLEE283 pKa = 4.16EE284 pKa = 3.99YY285 pKa = 10.59FSQRR289 pKa = 11.84WLWTVNGSHH298 pKa = 6.85NFTTQRR304 pKa = 11.84FYY306 pKa = 11.36DD307 pKa = 4.33PEE309 pKa = 3.99DD310 pKa = 3.5HH311 pKa = 6.94RR312 pKa = 11.84PPGAARR318 pKa = 11.84MFRR321 pKa = 11.84RR322 pKa = 11.84AYY324 pKa = 10.22AEE326 pKa = 3.96CTSYY330 pKa = 11.62DD331 pKa = 4.84RR332 pKa = 11.84VAAWNGKK339 pKa = 8.08SFFSPSAKK347 pKa = 10.05LEE349 pKa = 4.3HH350 pKa = 6.37GKK352 pKa = 10.03SRR354 pKa = 11.84AIFAGDD360 pKa = 3.12TLTYY364 pKa = 10.54FRR366 pKa = 11.84FQHH369 pKa = 5.61FLKK372 pKa = 10.42HH373 pKa = 7.16VEE375 pKa = 4.18DD376 pKa = 3.96VWTGKK381 pKa = 9.76HH382 pKa = 4.99VLLNPGRR389 pKa = 11.84GGMYY393 pKa = 10.92GMLKK397 pKa = 10.17RR398 pKa = 11.84IRR400 pKa = 11.84GISAGTGVHH409 pKa = 5.67TMMDD413 pKa = 3.51YY414 pKa = 11.28TDD416 pKa = 4.64FNSAHH421 pKa = 6.31TNASMRR427 pKa = 11.84ILFEE431 pKa = 3.88EE432 pKa = 4.2ATSYY436 pKa = 11.01VGYY439 pKa = 10.56DD440 pKa = 3.46PDD442 pKa = 4.36MGALLANSFDD452 pKa = 3.48NSYY455 pKa = 10.07MVTSDD460 pKa = 3.8GPRR463 pKa = 11.84KK464 pKa = 9.44IAGTLMSGHH473 pKa = 7.16RR474 pKa = 11.84ATTFINSVLNRR485 pKa = 11.84AYY487 pKa = 10.87LLVVNPSILRR497 pKa = 11.84LPAVHH502 pKa = 6.63VGDD505 pKa = 4.97DD506 pKa = 4.08VYY508 pKa = 11.48LSPPSLHH515 pKa = 6.8AAAEE519 pKa = 4.1LMDD522 pKa = 4.52DD523 pKa = 3.48VRR525 pKa = 11.84MSGLRR530 pKa = 11.84MNPLKK535 pKa = 10.72QSVGLITGEE544 pKa = 4.1FLRR547 pKa = 11.84MAFGSGSAFGYY558 pKa = 10.32APRR561 pKa = 11.84AIASMISGNWTNSNEE576 pKa = 4.04LTRR579 pKa = 11.84RR580 pKa = 11.84EE581 pKa = 3.98QVEE584 pKa = 4.2NLVTTSWSLTNRR596 pKa = 11.84CRR598 pKa = 11.84NPAAAVLATTALSKK612 pKa = 10.86RR613 pKa = 11.84CGLSKK618 pKa = 10.79CDD620 pKa = 5.53AEE622 pKa = 4.44ALLNGTLALGSGPARR637 pKa = 11.84AGKK640 pKa = 9.22HH641 pKa = 3.52VYY643 pKa = 10.02KK644 pKa = 10.3RR645 pKa = 11.84VEE647 pKa = 3.96IPAPPVSLIPKK658 pKa = 8.91EE659 pKa = 4.19VLSKK663 pKa = 10.83LPSRR667 pKa = 11.84ATDD670 pKa = 3.46DD671 pKa = 3.39YY672 pKa = 11.41LRR674 pKa = 11.84NHH676 pKa = 6.83TSTLEE681 pKa = 3.92RR682 pKa = 11.84TALQLLGTSPKK693 pKa = 9.33VTMLEE698 pKa = 3.7SSYY701 pKa = 11.56AKK703 pKa = 9.38TLRR706 pKa = 11.84PVDD709 pKa = 4.24EE710 pKa = 4.83VPLPMGYY717 pKa = 10.49AKK719 pKa = 10.57EE720 pKa = 4.13WMFGPASVQRR730 pKa = 11.84GVSIDD735 pKa = 3.24EE736 pKa = 4.03CRR738 pKa = 11.84NRR740 pKa = 11.84DD741 pKa = 3.87VIHH744 pKa = 6.67GALSEE749 pKa = 4.29YY750 pKa = 10.29PLIVLFKK757 pKa = 10.18EE758 pKa = 4.29QFTKK762 pKa = 10.7EE763 pKa = 3.62QLAILLRR770 pKa = 11.84MKK772 pKa = 10.66CDD774 pKa = 3.64LYY776 pKa = 11.03TNDD779 pKa = 2.89VRR781 pKa = 11.84VAAFGAEE788 pKa = 3.68ARR790 pKa = 11.84GMVVEE795 pKa = 4.91GWLPRR800 pKa = 11.84ADD802 pKa = 3.47VQHH805 pKa = 6.72ASRR808 pKa = 11.84RR809 pKa = 11.84ATEE812 pKa = 4.24MVLSTSINLYY822 pKa = 10.0FF823 pKa = 4.81

Molecular weight: 90.75 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1599

776

823

799.5

86.32

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.882 ± 1.336

1.251 ± 0.425

4.378 ± 0.268

4.753 ± 0.26

3.315 ± 0.426

7.942 ± 0.575

2.752 ± 0.393

4.065 ± 0.131

3.064 ± 0.341

8.568 ± 1.037

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.689 ± 0.349

4.315 ± 0.046

5.754 ± 0.664

2.376 ± 0.141

5.879 ± 0.598

7.567 ± 0.065

6.942 ± 0.463

7.692 ± 0.75

1.188 ± 0.02

3.627 ± 0.077
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski