Pacific flying fox faeces associated circular DNA virus-15

Taxonomy: Viruses; unclassified viruses

Average proteome isoelectric point is 7.16

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A140CTW4|A0A140CTW4_9VIRU Putative capsid protein OS=Pacific flying fox faeces associated circular DNA virus-15 OX=1796010 PE=4 SV=1
MM1 pKa = 7.69DD2 pKa = 4.21TFLTAHH8 pKa = 5.72QEE10 pKa = 4.0EE11 pKa = 5.04EE12 pKa = 3.88PRR14 pKa = 11.84YY15 pKa = 9.01PGSDD19 pKa = 3.5VEE21 pKa = 5.8DD22 pKa = 5.14DD23 pKa = 4.55SLLCLEE29 pKa = 5.44GPLSPEE35 pKa = 4.47DD36 pKa = 3.74EE37 pKa = 4.23TLEE40 pKa = 4.28APKK43 pKa = 10.27EE44 pKa = 4.15KK45 pKa = 10.29PKK47 pKa = 10.79SEE49 pKa = 4.01KK50 pKa = 10.3KK51 pKa = 10.16KK52 pKa = 10.37GSFRR56 pKa = 11.84LRR58 pKa = 11.84GTQFILTFPQCDD70 pKa = 3.43VKK72 pKa = 11.28KK73 pKa = 10.06EE74 pKa = 3.97VAAEE78 pKa = 4.36RR79 pKa = 11.84IDD81 pKa = 3.81IAWGKK86 pKa = 10.31DD87 pKa = 2.83LTGYY91 pKa = 7.57VVCEE95 pKa = 4.14EE96 pKa = 3.98NHH98 pKa = 6.93KK99 pKa = 11.14DD100 pKa = 3.76GTPHH104 pKa = 6.0LHH106 pKa = 6.47VYY108 pKa = 10.74LKK110 pKa = 10.76FEE112 pKa = 4.08NRR114 pKa = 11.84KK115 pKa = 9.5SFSKK119 pKa = 10.63VDD121 pKa = 3.46CFDD124 pKa = 5.64FIGQKK129 pKa = 9.69HH130 pKa = 5.79GNYY133 pKa = 9.29QVVRR137 pKa = 11.84STLKK141 pKa = 10.3SIEE144 pKa = 4.12YY145 pKa = 7.57VTKK148 pKa = 10.49GGNYY152 pKa = 7.25VAKK155 pKa = 10.24GVDD158 pKa = 3.27VEE160 pKa = 4.64SIKK163 pKa = 10.75KK164 pKa = 10.01KK165 pKa = 10.18KK166 pKa = 9.97APKK169 pKa = 8.5NQEE172 pKa = 3.64IAKK175 pKa = 8.89MLLDD179 pKa = 4.32GKK181 pKa = 11.36SMAEE185 pKa = 3.89INEE188 pKa = 4.17DD189 pKa = 3.04HH190 pKa = 6.97CGYY193 pKa = 11.67VMINKK198 pKa = 9.75RR199 pKa = 11.84KK200 pKa = 8.76IEE202 pKa = 4.18EE203 pKa = 4.02YY204 pKa = 8.22EE205 pKa = 4.01TWVKK209 pKa = 10.63CEE211 pKa = 4.36KK212 pKa = 10.13IKK214 pKa = 10.62KK215 pKa = 10.14SKK217 pKa = 10.18IDD219 pKa = 4.06WIPPSLDD226 pKa = 2.94GLTDD230 pKa = 3.83ANLQIATWICSNIRR244 pKa = 11.84QNRR247 pKa = 11.84AFKK250 pKa = 10.67APQLYY255 pKa = 9.78IHH257 pKa = 7.06GPRR260 pKa = 11.84NLGKK264 pKa = 8.97TSLVEE269 pKa = 3.61WLEE272 pKa = 4.14RR273 pKa = 11.84SLSVYY278 pKa = 10.53HH279 pKa = 6.21MPTMEE284 pKa = 5.29DD285 pKa = 4.19FYY287 pKa = 11.65DD288 pKa = 4.75LYY290 pKa = 11.43SDD292 pKa = 5.57DD293 pKa = 4.25YY294 pKa = 11.07DD295 pKa = 3.96LVVIDD300 pKa = 4.45EE301 pKa = 4.76FKK303 pKa = 10.78GQKK306 pKa = 8.92TIQFLNQFLQGSVMPIRR323 pKa = 11.84KK324 pKa = 9.42KK325 pKa = 10.76GSQGDD330 pKa = 3.5KK331 pKa = 10.7SKK333 pKa = 10.95NLPVVILSNYY343 pKa = 7.45TLSEE347 pKa = 4.64CYY349 pKa = 10.42VKK351 pKa = 10.68AANDD355 pKa = 3.31GRR357 pKa = 11.84LNTLEE362 pKa = 4.07CRR364 pKa = 11.84LEE366 pKa = 3.97IVEE369 pKa = 4.24VDD371 pKa = 3.83SFIDD375 pKa = 4.29FYY377 pKa = 11.55KK378 pKa = 10.84DD379 pKa = 3.16RR380 pKa = 11.84NDD382 pKa = 4.63LII384 pKa = 5.54

Molecular weight: 44.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A140CTW4|A0A140CTW4_9VIRU Putative capsid protein OS=Pacific flying fox faeces associated circular DNA virus-15 OX=1796010 PE=4 SV=1
MM1 pKa = 7.01VGYY4 pKa = 10.46VRR6 pKa = 11.84TITYY10 pKa = 8.53RR11 pKa = 11.84RR12 pKa = 11.84PYY14 pKa = 9.26GSVYY18 pKa = 10.66GPYY21 pKa = 10.41NKK23 pKa = 9.83YY24 pKa = 10.08ARR26 pKa = 11.84SRR28 pKa = 11.84RR29 pKa = 11.84IVNTAAKK36 pKa = 10.18LLRR39 pKa = 11.84KK40 pKa = 9.96RR41 pKa = 11.84MGGGPRR47 pKa = 11.84APLATRR53 pKa = 11.84GWYY56 pKa = 10.31GNTYY60 pKa = 9.4GKK62 pKa = 10.46RR63 pKa = 11.84GGEE66 pKa = 3.84LKK68 pKa = 11.01YY69 pKa = 10.33IDD71 pKa = 4.43VDD73 pKa = 3.82NVPAALPVGGTVDD86 pKa = 3.62VLNAIASGAGIDD98 pKa = 3.77EE99 pKa = 4.15RR100 pKa = 11.84VGRR103 pKa = 11.84QITLKK108 pKa = 10.71SIFSRR113 pKa = 11.84WGFYY117 pKa = 10.49PSTTTSAPQGTIVRR131 pKa = 11.84VLIVYY136 pKa = 8.02DD137 pKa = 3.74AQANSAASPPAVNEE151 pKa = 3.8ILATGTWDD159 pKa = 4.5SPMNLNNRR167 pKa = 11.84EE168 pKa = 3.83RR169 pKa = 11.84FKK171 pKa = 10.77IITEE175 pKa = 4.19FKK177 pKa = 8.16VTVGATLYY185 pKa = 9.92TAGALTAGSPVPRR198 pKa = 11.84VVEE201 pKa = 4.4KK202 pKa = 10.94YY203 pKa = 10.22KK204 pKa = 10.57KK205 pKa = 10.69LNMTTTYY212 pKa = 10.66SGPNNTNANIATGAIYY228 pKa = 10.68VVTIPSLNNTVVADD242 pKa = 3.81YY243 pKa = 9.3YY244 pKa = 11.21HH245 pKa = 6.69RR246 pKa = 11.84TRR248 pKa = 11.84YY249 pKa = 8.48MDD251 pKa = 3.49CC252 pKa = 4.13

Molecular weight: 27.48 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

636

252

384

318.0

35.8

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.289 ± 2.21

1.572 ± 0.716

5.818 ± 1.609

5.975 ± 2.188

2.987 ± 0.852

7.233 ± 1.395

1.415 ± 0.62

6.132 ± 0.109

8.176 ± 2.32

7.39 ± 1.117

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.887 ± 0.059

5.346 ± 0.852

4.874 ± 0.656

2.673 ± 0.902

5.503 ± 1.481

5.818 ± 0.401

6.761 ± 2.165

7.547 ± 0.962

1.258 ± 0.041

5.346 ± 1.094
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski