Suhomyces tanzawaensis NRRL Y-17324

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Suhomyces; Suhomyces tanzawaensis

Average proteome isoelectric point is 6.48

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5882 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1E4SR02|A0A1E4SR02_9ASCO Coatomer subunit beta' OS=Suhomyces tanzawaensis NRRL Y-17324 OX=984487 GN=CANTADRAFT_46178 PE=3 SV=1
GG1 pKa = 7.44SYY3 pKa = 10.25SANLTNEE10 pKa = 3.87NVFYY14 pKa = 7.85TTNITVGSEE23 pKa = 3.75KK24 pKa = 10.65KK25 pKa = 10.41QILVDD30 pKa = 4.57LDD32 pKa = 3.9TGSSDD37 pKa = 4.18LWVLSANGTDD47 pKa = 4.24GFASDD52 pKa = 3.61TAEE55 pKa = 4.12LQSNGYY61 pKa = 10.07LDD63 pKa = 4.46AEE65 pKa = 4.66KK66 pKa = 9.99STSLKK71 pKa = 9.43TDD73 pKa = 3.03NNEE76 pKa = 3.7FFITYY81 pKa = 10.29GDD83 pKa = 3.3NTFAYY88 pKa = 9.69GEE90 pKa = 4.38YY91 pKa = 9.07VTDD94 pKa = 5.64SIAIPNGPSIDD105 pKa = 3.77VEE107 pKa = 4.29FGLAFTTVNPFGIFGIGFDD126 pKa = 4.03LNEE129 pKa = 4.57AGFSSGAAPIYY140 pKa = 10.49NNYY143 pKa = 8.91PATLKK148 pKa = 11.03KK149 pKa = 10.58NGLIGKK155 pKa = 8.33NAYY158 pKa = 9.79SLYY161 pKa = 10.54LNSPNATTGSVIFGGYY177 pKa = 7.35DD178 pKa = 3.19TKK180 pKa = 11.22KK181 pKa = 10.29VDD183 pKa = 3.53GSFATLQTVNDD194 pKa = 3.56QVLAINVDD202 pKa = 3.78SVTVGDD208 pKa = 4.63NEE210 pKa = 4.06IQYY213 pKa = 10.51GSPALLDD220 pKa = 3.59SGTTITYY227 pKa = 10.05LPRR230 pKa = 11.84NVYY233 pKa = 10.1QGIIQNLPGSNTPYY247 pKa = 10.31GWRR250 pKa = 11.84ITTDD254 pKa = 2.88EE255 pKa = 4.37AQGHH259 pKa = 7.01DD260 pKa = 3.08ITYY263 pKa = 10.16KK264 pKa = 10.77FNDD267 pKa = 3.46VTVKK271 pKa = 10.59VPVSSLVGPTYY282 pKa = 10.84DD283 pKa = 4.7DD284 pKa = 3.1QGKK287 pKa = 9.25LLDD290 pKa = 3.93YY291 pKa = 10.7TSLQVSIGGSILGDD305 pKa = 3.16NFLRR309 pKa = 11.84YY310 pKa = 9.86AYY312 pKa = 10.56VIFNLDD318 pKa = 3.39DD319 pKa = 3.57QKK321 pKa = 11.53ISVAQAKK328 pKa = 7.99FTDD331 pKa = 4.31DD332 pKa = 4.4SDD334 pKa = 3.6IQAII338 pKa = 3.83

Molecular weight: 36.35 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1E4SH60|A0A1E4SH60_9ASCO DUF676 domain-containing protein OS=Suhomyces tanzawaensis NRRL Y-17324 OX=984487 GN=CANTADRAFT_22712 PE=3 SV=1
MM1 pKa = 7.4TPATQQWWGSPSPSPRR17 pKa = 11.84PNRR20 pKa = 11.84RR21 pKa = 11.84GARR24 pKa = 11.84VRR26 pKa = 11.84WGRR29 pKa = 11.84TNGSPPAAIPLCSPPPGSKK48 pKa = 10.58GPPTFRR54 pKa = 11.84KK55 pKa = 9.56RR56 pKa = 11.84QVPLSRR62 pKa = 11.84GGAKK66 pKa = 9.76SEE68 pKa = 4.11PLLSRR73 pKa = 11.84GGMLRR78 pKa = 11.84ASPRR82 pKa = 11.84RR83 pKa = 11.84LRR85 pKa = 3.78

Molecular weight: 9.22 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5881

1

5882

2688497

50

4399

457.1

51.41

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.097 ± 0.034

1.048 ± 0.011

5.844 ± 0.025

6.541 ± 0.04

4.399 ± 0.02

5.425 ± 0.028

2.296 ± 0.014

6.376 ± 0.027

6.925 ± 0.034

9.938 ± 0.035

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.803 ± 0.011

5.494 ± 0.028

4.723 ± 0.029

4.031 ± 0.025

4.26 ± 0.022

8.704 ± 0.041

5.595 ± 0.018

6.0 ± 0.021

1.041 ± 0.01

3.454 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski