TM7 phylum sp. oral taxon 349

Taxonomy: cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Candidatus Saccharibacteria

Average proteome isoelectric point is 6.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 963 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A563CXA7|A0A563CXA7_9BACT Uncharacterized protein OS=TM7 phylum sp. oral taxon 349 OX=713051 GN=EUA66_02615 PE=4 SV=1
MM1 pKa = 7.58EE2 pKa = 5.9LNPGEE7 pKa = 4.21RR8 pKa = 11.84YY9 pKa = 9.08EE10 pKa = 4.3VAFDD14 pKa = 3.89SYY16 pKa = 11.06TGNLAVGEE24 pKa = 4.25TVEE27 pKa = 5.95FYY29 pKa = 11.36DD30 pKa = 5.13NNDD33 pKa = 4.51LICVEE38 pKa = 5.05LEE40 pKa = 3.97NLDD43 pKa = 4.49DD44 pKa = 4.67SMGNVIRR51 pKa = 11.84AIGGVAGQEE60 pKa = 4.28IIMSSGLFSCDD71 pKa = 3.18HH72 pKa = 6.9GDD74 pKa = 3.18GFAIFKK80 pKa = 10.28ARR82 pKa = 11.84HH83 pKa = 6.55DD84 pKa = 5.14DD85 pKa = 3.64IQDD88 pKa = 3.31VSS90 pKa = 3.48

Molecular weight: 9.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A563D216|A0A563D216_9BACT Uncharacterized protein OS=TM7 phylum sp. oral taxon 349 OX=713051 GN=EUA66_01090 PE=4 SV=1
MM1 pKa = 7.34NGTWRR6 pKa = 11.84WQEE9 pKa = 3.99LAWDD13 pKa = 4.19SPATPAVGAAALEE26 pKa = 4.17RR27 pKa = 11.84LTTAVEE33 pKa = 3.99VGPVVLEE40 pKa = 3.71LRR42 pKa = 11.84AWAGGAYY49 pKa = 8.59WLAGCQPGRR58 pKa = 11.84AVEE61 pKa = 4.28LKK63 pKa = 10.46QLLGHH68 pKa = 6.71HH69 pKa = 6.6LPARR73 pKa = 11.84LHH75 pKa = 5.93RR76 pKa = 11.84PQRR79 pKa = 11.84QRR81 pKa = 11.84LAVGQAVRR89 pKa = 11.84LQVRR93 pKa = 11.84GNHH96 pKa = 5.39VSTSADD102 pKa = 2.7RR103 pKa = 11.84VVAATRR109 pKa = 11.84ALYY112 pKa = 10.42ACLSGLHH119 pKa = 6.43EE120 pKa = 4.39NQQAVVQLLIGRR132 pKa = 11.84RR133 pKa = 11.84LPSSSFTGPPAPGWRR148 pKa = 11.84EE149 pKa = 3.79LFLGQPAPRR158 pKa = 11.84SPEE161 pKa = 3.72RR162 pKa = 11.84PTRR165 pKa = 11.84TTSEE169 pKa = 3.7QHH171 pKa = 5.69GAAACLRR178 pKa = 11.84LGHH181 pKa = 6.72TGTPAQAHH189 pKa = 4.75QLFSRR194 pKa = 11.84LLGALRR200 pKa = 11.84IVEE203 pKa = 4.26TPRR206 pKa = 11.84ARR208 pKa = 11.84FRR210 pKa = 11.84LSAEE214 pKa = 3.8APDD217 pKa = 3.51RR218 pKa = 11.84LNRR221 pKa = 11.84VSRR224 pKa = 11.84PWAWPLRR231 pKa = 11.84LRR233 pKa = 11.84SGQLTALCGWPIGEE247 pKa = 4.84PPLPLLGDD255 pKa = 3.54LHH257 pKa = 6.83PRR259 pKa = 11.84LLPPPASLVRR269 pKa = 11.84SEE271 pKa = 4.48RR272 pKa = 11.84VIGLASAPGCRR283 pKa = 11.84QPVAIPIRR291 pKa = 11.84DD292 pKa = 3.75AVFHH296 pKa = 5.55THH298 pKa = 7.12LLGPTGTGKK307 pKa = 8.49STVLLSLALADD318 pKa = 4.13VEE320 pKa = 4.12AHH322 pKa = 6.42RR323 pKa = 11.84AVLLLDD329 pKa = 3.97PKK331 pKa = 11.28GDD333 pKa = 3.71LATDD337 pKa = 3.93LLARR341 pKa = 11.84VPEE344 pKa = 4.47GRR346 pKa = 11.84HH347 pKa = 5.18EE348 pKa = 4.35DD349 pKa = 3.68VVVIDD354 pKa = 4.25PTNPAPVGLNPLAGPARR371 pKa = 11.84LAPVTADD378 pKa = 3.31SLLGTLAALFHH389 pKa = 5.8EE390 pKa = 4.71HH391 pKa = 6.02WGVRR395 pKa = 11.84TADD398 pKa = 3.6VLNAALLTLARR409 pKa = 11.84TPGANLLWLPPLLTDD424 pKa = 3.41PAFRR428 pKa = 11.84RR429 pKa = 11.84RR430 pKa = 11.84VLDD433 pKa = 4.38DD434 pKa = 3.31QDD436 pKa = 5.23DD437 pKa = 4.09PLGTGAFWAAYY448 pKa = 6.69EE449 pKa = 4.15AKK451 pKa = 10.14RR452 pKa = 11.84PQAQAVEE459 pKa = 4.14IAPVLNKK466 pKa = 9.82LRR468 pKa = 11.84QLILRR473 pKa = 11.84PHH475 pKa = 6.2LRR477 pKa = 11.84AVLGQSAPRR486 pKa = 11.84FTVEE490 pKa = 3.89EE491 pKa = 4.29LFTRR495 pKa = 11.84KK496 pKa = 9.96RR497 pKa = 11.84IVVVNLNRR505 pKa = 11.84GLLGAEE511 pKa = 4.34AARR514 pKa = 11.84LLGSLLVGQLWSRR527 pKa = 11.84LLARR531 pKa = 11.84QALPPEE537 pKa = 4.28RR538 pKa = 11.84RR539 pKa = 11.84HH540 pKa = 5.23VVSVYY545 pKa = 10.05IDD547 pKa = 3.53EE548 pKa = 4.45AHH550 pKa = 7.09DD551 pKa = 4.35FINGLPGDD559 pKa = 4.03LSEE562 pKa = 5.58ALAQARR568 pKa = 11.84SLGGALHH575 pKa = 7.28LAHH578 pKa = 7.04QYY580 pKa = 10.03RR581 pKa = 11.84AQLSPAMVQALEE593 pKa = 4.04TNARR597 pKa = 11.84NKK599 pKa = 10.16IYY601 pKa = 10.46FGLSGTDD608 pKa = 3.21AAAVAHH614 pKa = 6.72LAPEE618 pKa = 4.93LEE620 pKa = 4.22AQDD623 pKa = 5.27FIGLPAYY630 pKa = 9.7HH631 pKa = 7.45AYY633 pKa = 8.04ATLMQQGRR641 pKa = 11.84STGWLSVTTRR651 pKa = 11.84PAPPARR657 pKa = 11.84QEE659 pKa = 3.97PASLYY664 pKa = 9.99AASHH668 pKa = 4.74QRR670 pKa = 11.84YY671 pKa = 8.3GVPATRR677 pKa = 11.84TEE679 pKa = 3.89QQLINLTKK687 pKa = 9.45PSHH690 pKa = 6.69HH691 pKa = 6.54ATQPPDD697 pKa = 3.71SPAKK701 pKa = 10.11PSTGSAAPDD710 pKa = 3.26QPGPIGRR717 pKa = 11.84RR718 pKa = 11.84RR719 pKa = 11.84RR720 pKa = 3.46

Molecular weight: 77.74 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

963

0

963

276238

37

1281

286.9

31.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.471 ± 0.094

0.797 ± 0.023

5.829 ± 0.059

5.767 ± 0.073

3.61 ± 0.05

6.691 ± 0.08

2.084 ± 0.038

6.667 ± 0.069

5.664 ± 0.08

9.022 ± 0.085

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.32 ± 0.034

4.166 ± 0.059

3.867 ± 0.059

3.864 ± 0.048

5.984 ± 0.069

6.373 ± 0.076

6.019 ± 0.064

7.338 ± 0.084

1.063 ± 0.031

3.402 ± 0.044
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski