Circovirus-like genome DHCV-1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae

Average proteome isoelectric point is 8.62

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A190WHM5|A0A190WHM5_9CIRC ATP-dependent helicase Rep OS=Circovirus-like genome DHCV-1 OX=1788450 PE=3 SV=1
MM1 pKa = 7.2KK2 pKa = 10.55VKK4 pKa = 10.62VYY6 pKa = 11.08TNFKK10 pKa = 8.13SKK12 pKa = 10.66KK13 pKa = 8.6VIRR16 pKa = 11.84AKK18 pKa = 11.0YY19 pKa = 10.24SITLALTWITFSFPSHH35 pKa = 6.29PTSNMSYY42 pKa = 9.82QLNWCFTVNNYY53 pKa = 7.67TVLDD57 pKa = 4.02EE58 pKa = 5.6QKK60 pKa = 10.66LQDD63 pKa = 3.8MPYY66 pKa = 10.17KK67 pKa = 9.26YY68 pKa = 10.26LIYY71 pKa = 10.08GRR73 pKa = 11.84EE74 pKa = 4.07VGEE77 pKa = 4.33EE78 pKa = 4.28GTPHH82 pKa = 5.73LQGYY86 pKa = 7.1VQYY89 pKa = 10.6KK90 pKa = 9.6KK91 pKa = 10.74KK92 pKa = 10.71LRR94 pKa = 11.84LTALKK99 pKa = 10.03KK100 pKa = 9.8LHH102 pKa = 6.44PTAHH106 pKa = 6.36WEE108 pKa = 3.77AAKK111 pKa = 10.93GNEE114 pKa = 4.33EE115 pKa = 4.02QNKK118 pKa = 8.4TYY120 pKa = 10.33CSKK123 pKa = 11.05EE124 pKa = 3.55GDD126 pKa = 3.61FLEE129 pKa = 5.34FGTPTKK135 pKa = 10.48TNGGASTIAARR146 pKa = 11.84AEE148 pKa = 3.93KK149 pKa = 10.19NARR152 pKa = 11.84LMTAPIEE159 pKa = 3.98EE160 pKa = 5.28LILTGEE166 pKa = 4.61LHH168 pKa = 6.14PQHH171 pKa = 6.87AKK173 pKa = 10.28AIHH176 pKa = 5.67NARR179 pKa = 11.84ILVQEE184 pKa = 4.72EE185 pKa = 3.95RR186 pKa = 11.84RR187 pKa = 11.84KK188 pKa = 10.11LHH190 pKa = 6.75PPDD193 pKa = 5.29ALDD196 pKa = 4.52GDD198 pKa = 5.09LPHH201 pKa = 6.83LWFWGPAGTGKK212 pKa = 10.24SYY214 pKa = 10.93KK215 pKa = 10.45ARR217 pKa = 11.84TDD219 pKa = 3.39YY220 pKa = 11.24PDD222 pKa = 4.75AYY224 pKa = 10.92LKK226 pKa = 10.62AANKK230 pKa = 7.73WWCGYY235 pKa = 9.96NDD237 pKa = 4.11EE238 pKa = 4.47DD239 pKa = 4.57TVLIEE244 pKa = 4.49EE245 pKa = 4.21WDD247 pKa = 3.68KK248 pKa = 11.27NHH250 pKa = 6.45NVLAHH255 pKa = 6.37HH256 pKa = 6.89LKK258 pKa = 10.54LWADD262 pKa = 4.38RR263 pKa = 11.84YY264 pKa = 9.66PFSGEE269 pKa = 4.04VKK271 pKa = 10.46GGTTGKK277 pKa = 9.58IRR279 pKa = 11.84PKK281 pKa = 10.33RR282 pKa = 11.84IVITSNYY289 pKa = 8.7HH290 pKa = 6.51PRR292 pKa = 11.84DD293 pKa = 2.92IWGDD297 pKa = 3.73DD298 pKa = 3.48PEE300 pKa = 5.67GALGPIMRR308 pKa = 11.84RR309 pKa = 11.84FNVVHH314 pKa = 7.04FDD316 pKa = 3.43QKK318 pKa = 11.56FNFF321 pKa = 3.83

Molecular weight: 36.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A190WHM5|A0A190WHM5_9CIRC ATP-dependent helicase Rep OS=Circovirus-like genome DHCV-1 OX=1788450 PE=3 SV=1
MM1 pKa = 7.2KK2 pKa = 10.55VKK4 pKa = 10.62VYY6 pKa = 11.08TNFKK10 pKa = 8.13SKK12 pKa = 10.66KK13 pKa = 8.6VIRR16 pKa = 11.84AKK18 pKa = 11.0YY19 pKa = 10.24SITLALTWITFSFPSHH35 pKa = 6.29PTSNMSYY42 pKa = 9.82QLNWCFTVNNYY53 pKa = 7.67TVLDD57 pKa = 4.02EE58 pKa = 5.6QKK60 pKa = 10.66LQDD63 pKa = 3.8MPYY66 pKa = 10.17KK67 pKa = 9.26YY68 pKa = 10.26LIYY71 pKa = 10.08GRR73 pKa = 11.84EE74 pKa = 4.07VGEE77 pKa = 4.33EE78 pKa = 4.28GTPHH82 pKa = 5.73LQGYY86 pKa = 7.1VQYY89 pKa = 10.6KK90 pKa = 9.6KK91 pKa = 10.74KK92 pKa = 10.71LRR94 pKa = 11.84LTALKK99 pKa = 10.03KK100 pKa = 9.8LHH102 pKa = 6.44PTAHH106 pKa = 6.36WEE108 pKa = 3.77AAKK111 pKa = 10.93GNEE114 pKa = 4.33EE115 pKa = 4.02QNKK118 pKa = 8.4TYY120 pKa = 10.33CSKK123 pKa = 11.05EE124 pKa = 3.55GDD126 pKa = 3.61FLEE129 pKa = 5.34FGTPTKK135 pKa = 10.48TNGGASTIAARR146 pKa = 11.84AEE148 pKa = 3.93KK149 pKa = 10.19NARR152 pKa = 11.84LMTAPIEE159 pKa = 3.98EE160 pKa = 5.28LILTGEE166 pKa = 4.61LHH168 pKa = 6.14PQHH171 pKa = 6.87AKK173 pKa = 10.28AIHH176 pKa = 5.67NARR179 pKa = 11.84ILVQEE184 pKa = 4.72EE185 pKa = 3.95RR186 pKa = 11.84RR187 pKa = 11.84KK188 pKa = 10.11LHH190 pKa = 6.75PPDD193 pKa = 5.29ALDD196 pKa = 4.52GDD198 pKa = 5.09LPHH201 pKa = 6.83LWFWGPAGTGKK212 pKa = 10.24SYY214 pKa = 10.93KK215 pKa = 10.45ARR217 pKa = 11.84TDD219 pKa = 3.39YY220 pKa = 11.24PDD222 pKa = 4.75AYY224 pKa = 10.92LKK226 pKa = 10.62AANKK230 pKa = 7.73WWCGYY235 pKa = 9.96NDD237 pKa = 4.11EE238 pKa = 4.47DD239 pKa = 4.57TVLIEE244 pKa = 4.49EE245 pKa = 4.21WDD247 pKa = 3.68KK248 pKa = 11.27NHH250 pKa = 6.45NVLAHH255 pKa = 6.37HH256 pKa = 6.89LKK258 pKa = 10.54LWADD262 pKa = 4.38RR263 pKa = 11.84YY264 pKa = 9.66PFSGEE269 pKa = 4.04VKK271 pKa = 10.46GGTTGKK277 pKa = 9.58IRR279 pKa = 11.84PKK281 pKa = 10.33RR282 pKa = 11.84IVITSNYY289 pKa = 8.7HH290 pKa = 6.51PRR292 pKa = 11.84DD293 pKa = 2.92IWGDD297 pKa = 3.73DD298 pKa = 3.48PEE300 pKa = 5.67GALGPIMRR308 pKa = 11.84RR309 pKa = 11.84FNVVHH314 pKa = 7.04FDD316 pKa = 3.43QKK318 pKa = 11.56FNFF321 pKa = 3.83

Molecular weight: 36.98 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

321

321

321

321.0

36.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.477 ± 0.0

0.935 ± 0.0

4.984 ± 0.0

6.231 ± 0.0

3.738 ± 0.0

6.854 ± 0.0

4.361 ± 0.0

4.673 ± 0.0

9.346 ± 0.0

8.411 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.558 ± 0.0

5.296 ± 0.0

5.607 ± 0.0

2.804 ± 0.0

4.673 ± 0.0

3.427 ± 0.0

7.165 ± 0.0

4.361 ± 0.0

3.115 ± 0.0

4.984 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski