Amino acid dipepetide frequency for Sclerotinia minor endornavirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.728AlaAla: 4.728 ± 0.0
0.498AlaCys: 0.498 ± 0.0
3.235AlaAsp: 3.235 ± 0.0
4.728AlaGlu: 4.728 ± 0.0
0.995AlaPhe: 0.995 ± 0.0
2.986AlaGly: 2.986 ± 0.0
1.493AlaHis: 1.493 ± 0.0
3.981AlaIle: 3.981 ± 0.0
2.488AlaLys: 2.488 ± 0.0
6.22AlaLeu: 6.22 ± 0.0
2.239AlaMet: 2.239 ± 0.0
4.479AlaAsn: 4.479 ± 0.0
1.493AlaPro: 1.493 ± 0.0
1.991AlaGln: 1.991 ± 0.0
3.235AlaArg: 3.235 ± 0.0
5.225AlaSer: 5.225 ± 0.0
6.718AlaThr: 6.718 ± 0.0
5.474AlaVal: 5.474 ± 0.0
0.746AlaTrp: 0.746 ± 0.0
1.493AlaTyr: 1.493 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.498CysAla: 0.498 ± 0.0
0.995CysCys: 0.995 ± 0.0
1.244CysAsp: 1.244 ± 0.0
0.249CysGlu: 0.249 ± 0.0
0.249CysPhe: 0.249 ± 0.0
1.742CysGly: 1.742 ± 0.0
1.244CysHis: 1.244 ± 0.0
0.995CysIle: 0.995 ± 0.0
2.239CysLys: 2.239 ± 0.0
0.995CysLeu: 0.995 ± 0.0
0.249CysMet: 0.249 ± 0.0
2.239CysAsn: 2.239 ± 0.0
0.249CysPro: 0.249 ± 0.0
0.746CysGln: 0.746 ± 0.0
0.995CysArg: 0.995 ± 0.0
1.244CysSer: 1.244 ± 0.0
1.244CysThr: 1.244 ± 0.0
0.995CysVal: 0.995 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
5.225AspAla: 5.225 ± 0.0
0.995AspCys: 0.995 ± 0.0
4.479AspAsp: 4.479 ± 0.0
1.991AspGlu: 1.991 ± 0.0
1.991AspPhe: 1.991 ± 0.0
2.737AspGly: 2.737 ± 0.0
1.991AspHis: 1.991 ± 0.0
5.723AspIle: 5.723 ± 0.0
2.737AspLys: 2.737 ± 0.0
4.23AspLeu: 4.23 ± 0.0
1.991AspMet: 1.991 ± 0.0
4.23AspAsn: 4.23 ± 0.0
0.746AspPro: 0.746 ± 0.0
2.239AspGln: 2.239 ± 0.0
1.991AspArg: 1.991 ± 0.0
6.967AspSer: 6.967 ± 0.0
6.22AspThr: 6.22 ± 0.0
4.728AspVal: 4.728 ± 0.0
0.746AspTrp: 0.746 ± 0.0
2.488AspTyr: 2.488 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.235GluAla: 3.235 ± 0.0
1.244GluCys: 1.244 ± 0.0
1.991GluAsp: 1.991 ± 0.0
0.498GluGlu: 0.498 ± 0.0
1.244GluPhe: 1.244 ± 0.0
1.991GluGly: 1.991 ± 0.0
2.737GluHis: 2.737 ± 0.0
1.244GluIle: 1.244 ± 0.0
1.493GluLys: 1.493 ± 0.0
5.225GluLeu: 5.225 ± 0.0
0.746GluMet: 0.746 ± 0.0
2.488GluAsn: 2.488 ± 0.0
1.742GluPro: 1.742 ± 0.0
2.488GluGln: 2.488 ± 0.0
2.239GluArg: 2.239 ± 0.0
3.981GluSer: 3.981 ± 0.0
2.488GluThr: 2.488 ± 0.0
1.493GluVal: 1.493 ± 0.0
0.746GluTrp: 0.746 ± 0.0
1.493GluTyr: 1.493 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.493PheAla: 1.493 ± 0.0
0.0PheCys: 0.0 ± 0.0
2.986PheAsp: 2.986 ± 0.0
1.493PheGlu: 1.493 ± 0.0
0.746PhePhe: 0.746 ± 0.0
1.742PheGly: 1.742 ± 0.0
0.0PheHis: 0.0 ± 0.0
1.493PheIle: 1.493 ± 0.0
2.737PheLys: 2.737 ± 0.0
1.244PheLeu: 1.244 ± 0.0
1.244PheMet: 1.244 ± 0.0
2.986PheAsn: 2.986 ± 0.0
0.746PhePro: 0.746 ± 0.0
1.244PheGln: 1.244 ± 0.0
0.746PheArg: 0.746 ± 0.0
2.488PheSer: 2.488 ± 0.0
3.235PheThr: 3.235 ± 0.0
1.493PheVal: 1.493 ± 0.0
0.249PheTrp: 0.249 ± 0.0
0.995PheTyr: 0.995 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
2.986GlyAla: 2.986 ± 0.0
0.498GlyCys: 0.498 ± 0.0
3.981GlyAsp: 3.981 ± 0.0
0.746GlyGlu: 0.746 ± 0.0
2.488GlyPhe: 2.488 ± 0.0
0.746GlyGly: 0.746 ± 0.0
0.746GlyHis: 0.746 ± 0.0
2.488GlyIle: 2.488 ± 0.0
3.981GlyLys: 3.981 ± 0.0
5.225GlyLeu: 5.225 ± 0.0
1.742GlyMet: 1.742 ± 0.0
2.986GlyAsn: 2.986 ± 0.0
1.991GlyPro: 1.991 ± 0.0
0.995GlyGln: 0.995 ± 0.0
3.483GlyArg: 3.483 ± 0.0
4.23GlySer: 4.23 ± 0.0
3.732GlyThr: 3.732 ± 0.0
4.23GlyVal: 4.23 ± 0.0
0.498GlyTrp: 0.498 ± 0.0
2.737GlyTyr: 2.737 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
2.488HisAla: 2.488 ± 0.0
0.995HisCys: 0.995 ± 0.0
2.239HisAsp: 2.239 ± 0.0
0.995HisGlu: 0.995 ± 0.0
0.498HisPhe: 0.498 ± 0.0
1.742HisGly: 1.742 ± 0.0
0.249HisHis: 0.249 ± 0.0
1.991HisIle: 1.991 ± 0.0
2.737HisLys: 2.737 ± 0.0
2.737HisLeu: 2.737 ± 0.0
1.244HisMet: 1.244 ± 0.0
2.488HisAsn: 2.488 ± 0.0
1.991HisPro: 1.991 ± 0.0
1.244HisGln: 1.244 ± 0.0
0.498HisArg: 0.498 ± 0.0
1.991HisSer: 1.991 ± 0.0
1.742HisThr: 1.742 ± 0.0
3.483HisVal: 3.483 ± 0.0
0.498HisTrp: 0.498 ± 0.0
1.991HisTyr: 1.991 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
3.732IleAla: 3.732 ± 0.0
1.991IleCys: 1.991 ± 0.0
6.469IleAsp: 6.469 ± 0.0
3.732IleGlu: 3.732 ± 0.0
1.244IlePhe: 1.244 ± 0.0
1.244IleGly: 1.244 ± 0.0
1.991IleHis: 1.991 ± 0.0
2.737IleIle: 2.737 ± 0.0
2.737IleLys: 2.737 ± 0.0
5.723IleLeu: 5.723 ± 0.0
1.244IleMet: 1.244 ± 0.0
4.23IleAsn: 4.23 ± 0.0
1.742IlePro: 1.742 ± 0.0
1.493IleGln: 1.493 ± 0.0
2.239IleArg: 2.239 ± 0.0
5.474IleSer: 5.474 ± 0.0
6.22IleThr: 6.22 ± 0.0
4.23IleVal: 4.23 ± 0.0
0.746IleTrp: 0.746 ± 0.0
2.239IleTyr: 2.239 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
4.479LysAla: 4.479 ± 0.0
1.244LysCys: 1.244 ± 0.0
1.493LysAsp: 1.493 ± 0.0
1.493LysGlu: 1.493 ± 0.0
1.244LysPhe: 1.244 ± 0.0
3.483LysGly: 3.483 ± 0.0
3.732LysHis: 3.732 ± 0.0
1.991LysIle: 1.991 ± 0.0
1.493LysLys: 1.493 ± 0.0
6.967LysLeu: 6.967 ± 0.0
2.737LysMet: 2.737 ± 0.0
2.737LysAsn: 2.737 ± 0.0
2.239LysPro: 2.239 ± 0.0
2.737LysGln: 2.737 ± 0.0
2.986LysArg: 2.986 ± 0.0
5.972LysSer: 5.972 ± 0.0
3.732LysThr: 3.732 ± 0.0
4.23LysVal: 4.23 ± 0.0
0.746LysTrp: 0.746 ± 0.0
2.737LysTyr: 2.737 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
4.976LeuAla: 4.976 ± 0.0
4.23LeuCys: 4.23 ± 0.0
5.972LeuAsp: 5.972 ± 0.0
3.483LeuGlu: 3.483 ± 0.0
2.737LeuPhe: 2.737 ± 0.0
6.22LeuGly: 6.22 ± 0.0
2.986LeuHis: 2.986 ± 0.0
3.483LeuIle: 3.483 ± 0.0
5.474LeuLys: 5.474 ± 0.0
8.709LeuLeu: 8.709 ± 0.0
3.483LeuMet: 3.483 ± 0.0
5.225LeuAsn: 5.225 ± 0.0
3.981LeuPro: 3.981 ± 0.0
2.239LeuGln: 2.239 ± 0.0
4.976LeuArg: 4.976 ± 0.0
8.709LeuSer: 8.709 ± 0.0
7.216LeuThr: 7.216 ± 0.0
4.728LeuVal: 4.728 ± 0.0
1.244LeuTrp: 1.244 ± 0.0
4.23LeuTyr: 4.23 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.493MetAla: 1.493 ± 0.0
0.746MetCys: 0.746 ± 0.0
0.249MetAsp: 0.249 ± 0.0
1.742MetGlu: 1.742 ± 0.0
0.995MetPhe: 0.995 ± 0.0
1.244MetGly: 1.244 ± 0.0
0.995MetHis: 0.995 ± 0.0
1.244MetIle: 1.244 ± 0.0
1.244MetLys: 1.244 ± 0.0
2.986MetLeu: 2.986 ± 0.0
0.746MetMet: 0.746 ± 0.0
0.995MetAsn: 0.995 ± 0.0
2.239MetPro: 2.239 ± 0.0
0.746MetGln: 0.746 ± 0.0
0.995MetArg: 0.995 ± 0.0
3.732MetSer: 3.732 ± 0.0
2.239MetThr: 2.239 ± 0.0
3.483MetVal: 3.483 ± 0.0
0.249MetTrp: 0.249 ± 0.0
1.244MetTyr: 1.244 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.981AsnAla: 3.981 ± 0.0
0.746AsnCys: 0.746 ± 0.0
4.728AsnAsp: 4.728 ± 0.0
2.737AsnGlu: 2.737 ± 0.0
1.742AsnPhe: 1.742 ± 0.0
3.732AsnGly: 3.732 ± 0.0
3.235AsnHis: 3.235 ± 0.0
5.474AsnIle: 5.474 ± 0.0
4.976AsnLys: 4.976 ± 0.0
4.23AsnLeu: 4.23 ± 0.0
1.991AsnMet: 1.991 ± 0.0
3.732AsnAsn: 3.732 ± 0.0
1.244AsnPro: 1.244 ± 0.0
1.493AsnGln: 1.493 ± 0.0
1.493AsnArg: 1.493 ± 0.0
4.23AsnSer: 4.23 ± 0.0
3.981AsnThr: 3.981 ± 0.0
4.728AsnVal: 4.728 ± 0.0
0.995AsnTrp: 0.995 ± 0.0
2.986AsnTyr: 2.986 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
2.737ProAla: 2.737 ± 0.0
0.498ProCys: 0.498 ± 0.0
2.239ProAsp: 2.239 ± 0.0
1.244ProGlu: 1.244 ± 0.0
1.493ProPhe: 1.493 ± 0.0
1.244ProGly: 1.244 ± 0.0
1.244ProHis: 1.244 ± 0.0
3.235ProIle: 3.235 ± 0.0
3.981ProLys: 3.981 ± 0.0
2.737ProLeu: 2.737 ± 0.0
0.249ProMet: 0.249 ± 0.0
2.239ProAsn: 2.239 ± 0.0
1.742ProPro: 1.742 ± 0.0
0.498ProGln: 0.498 ± 0.0
0.995ProArg: 0.995 ± 0.0
3.483ProSer: 3.483 ± 0.0
2.737ProThr: 2.737 ± 0.0
1.991ProVal: 1.991 ± 0.0
0.498ProTrp: 0.498 ± 0.0
1.244ProTyr: 1.244 ± 0.0
0.249ProXaa: 0.249 ± 0.0
Gln
1.244GlnAla: 1.244 ± 0.0
0.0GlnCys: 0.0 ± 0.0
1.244GlnAsp: 1.244 ± 0.0
0.746GlnGlu: 0.746 ± 0.0
1.742GlnPhe: 1.742 ± 0.0
1.493GlnGly: 1.493 ± 0.0
0.995GlnHis: 0.995 ± 0.0
1.493GlnIle: 1.493 ± 0.0
0.995GlnLys: 0.995 ± 0.0
5.225GlnLeu: 5.225 ± 0.0
0.746GlnMet: 0.746 ± 0.0
2.986GlnAsn: 2.986 ± 0.0
1.244GlnPro: 1.244 ± 0.0
1.493GlnGln: 1.493 ± 0.0
1.742GlnArg: 1.742 ± 0.0
2.239GlnSer: 2.239 ± 0.0
3.483GlnThr: 3.483 ± 0.0
0.498GlnVal: 0.498 ± 0.0
0.498GlnTrp: 0.498 ± 0.0
1.493GlnTyr: 1.493 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.483ArgAla: 3.483 ± 0.0
0.498ArgCys: 0.498 ± 0.0
2.986ArgAsp: 2.986 ± 0.0
1.244ArgGlu: 1.244 ± 0.0
1.742ArgPhe: 1.742 ± 0.0
2.488ArgGly: 2.488 ± 0.0
1.742ArgHis: 1.742 ± 0.0
3.235ArgIle: 3.235 ± 0.0
1.991ArgLys: 1.991 ± 0.0
4.976ArgLeu: 4.976 ± 0.0
0.995ArgMet: 0.995 ± 0.0
1.493ArgAsn: 1.493 ± 0.0
2.239ArgPro: 2.239 ± 0.0
2.239ArgGln: 2.239 ± 0.0
1.991ArgArg: 1.991 ± 0.0
2.239ArgSer: 2.239 ± 0.0
1.991ArgThr: 1.991 ± 0.0
2.737ArgVal: 2.737 ± 0.0
0.0ArgTrp: 0.0 ± 0.0
1.244ArgTyr: 1.244 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.723SerAla: 5.723 ± 0.0
0.746SerCys: 0.746 ± 0.0
6.718SerAsp: 6.718 ± 0.0
4.728SerGlu: 4.728 ± 0.0
2.239SerPhe: 2.239 ± 0.0
4.976SerGly: 4.976 ± 0.0
1.991SerHis: 1.991 ± 0.0
6.22SerIle: 6.22 ± 0.0
4.728SerLys: 4.728 ± 0.0
8.211SerLeu: 8.211 ± 0.0
2.986SerMet: 2.986 ± 0.0
4.479SerAsn: 4.479 ± 0.0
2.986SerPro: 2.986 ± 0.0
2.986SerGln: 2.986 ± 0.0
3.235SerArg: 3.235 ± 0.0
5.474SerSer: 5.474 ± 0.0
8.709SerThr: 8.709 ± 0.0
4.976SerVal: 4.976 ± 0.0
0.995SerTrp: 0.995 ± 0.0
2.737SerTyr: 2.737 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
5.474ThrAla: 5.474 ± 0.0
0.746ThrCys: 0.746 ± 0.0
3.732ThrAsp: 3.732 ± 0.0
2.488ThrGlu: 2.488 ± 0.0
2.488ThrPhe: 2.488 ± 0.0
4.479ThrGly: 4.479 ± 0.0
1.244ThrHis: 1.244 ± 0.0
7.216ThrIle: 7.216 ± 0.0
4.976ThrLys: 4.976 ± 0.0
7.465ThrLeu: 7.465 ± 0.0
1.991ThrMet: 1.991 ± 0.0
5.225ThrAsn: 5.225 ± 0.0
3.483ThrPro: 3.483 ± 0.0
2.737ThrGln: 2.737 ± 0.0
3.732ThrArg: 3.732 ± 0.0
6.967ThrSer: 6.967 ± 0.0
5.474ThrThr: 5.474 ± 0.0
5.225ThrVal: 5.225 ± 0.0
0.995ThrTrp: 0.995 ± 0.0
2.986ThrTyr: 2.986 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
3.732ValAla: 3.732 ± 0.0
0.746ValCys: 0.746 ± 0.0
4.976ValAsp: 4.976 ± 0.0
2.986ValGlu: 2.986 ± 0.0
1.991ValPhe: 1.991 ± 0.0
3.235ValGly: 3.235 ± 0.0
2.488ValHis: 2.488 ± 0.0
4.728ValIle: 4.728 ± 0.0
4.23ValLys: 4.23 ± 0.0
6.967ValLeu: 6.967 ± 0.0
1.493ValMet: 1.493 ± 0.0
4.479ValAsn: 4.479 ± 0.0
2.737ValPro: 2.737 ± 0.0
0.995ValGln: 0.995 ± 0.0
2.239ValArg: 2.239 ± 0.0
6.22ValSer: 6.22 ± 0.0
4.479ValThr: 4.479 ± 0.0
4.728ValVal: 4.728 ± 0.0
0.995ValTrp: 0.995 ± 0.0
1.991ValTyr: 1.991 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.249TrpAla: 0.249 ± 0.0
0.498TrpCys: 0.498 ± 0.0
1.244TrpAsp: 1.244 ± 0.0
0.249TrpGlu: 0.249 ± 0.0
0.746TrpPhe: 0.746 ± 0.0
0.498TrpGly: 0.498 ± 0.0
1.244TrpHis: 1.244 ± 0.0
0.249TrpIle: 0.249 ± 0.0
0.995TrpLys: 0.995 ± 0.0
1.244TrpLeu: 1.244 ± 0.0
0.0TrpMet: 0.0 ± 0.0
0.498TrpAsn: 0.498 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.995TrpArg: 0.995 ± 0.0
2.488TrpSer: 2.488 ± 0.0
0.249TrpThr: 0.249 ± 0.0
0.746TrpVal: 0.746 ± 0.0
0.498TrpTrp: 0.498 ± 0.0
0.249TrpTyr: 0.249 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.488TyrAla: 2.488 ± 0.0
0.498TyrCys: 0.498 ± 0.0
2.239TyrAsp: 2.239 ± 0.0
3.235TyrGlu: 3.235 ± 0.0
0.746TyrPhe: 0.746 ± 0.0
2.488TyrGly: 2.488 ± 0.0
1.493TyrHis: 1.493 ± 0.0
2.239TyrIle: 2.239 ± 0.0
2.239TyrLys: 2.239 ± 0.0
2.737TyrLeu: 2.737 ± 0.0
1.244TyrMet: 1.244 ± 0.0
2.488TyrAsn: 2.488 ± 0.0
1.493TyrPro: 1.493 ± 0.0
0.995TyrGln: 0.995 ± 0.0
0.746TyrArg: 0.746 ± 0.0
2.488TyrSer: 2.488 ± 0.0
3.235TyrThr: 3.235 ± 0.0
2.239TyrVal: 2.239 ± 0.0
0.995TyrTrp: 0.995 ± 0.0
0.746TyrTyr: 0.746 ± 0.0
0.249TyrXaa: 0.249 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.249XaaLeu: 0.249 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.249XaaPro: 0.249 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (4020 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski