Simian torque teno virus 30

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus; Torque teno chlorocebus virus 1

Average proteome isoelectric point is 8.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C5IMW1|A0A0C5IMW1_9VIRU ORF2 OS=Simian torque teno virus 30 OX=1619218 PE=4 SV=1
MM1 pKa = 7.02YY2 pKa = 10.15FRR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84KK9 pKa = 9.47AKK11 pKa = 9.86LGSVGDD17 pKa = 4.08YY18 pKa = 11.3LEE20 pKa = 5.19LSHH23 pKa = 7.37PGLPTGTPRR32 pKa = 11.84AMAKK36 pKa = 9.96RR37 pKa = 11.84PRR39 pKa = 11.84EE40 pKa = 4.13TYY42 pKa = 7.36EE43 pKa = 4.07TTSKK47 pKa = 10.64EE48 pKa = 3.86AATWLHH54 pKa = 6.13LVGEE58 pKa = 4.68THH60 pKa = 7.5DD61 pKa = 3.84LWCPCGKK68 pKa = 9.54PLPHH72 pKa = 7.13LSALLNTVGAATTTSTCRR90 pKa = 11.84TGGEE94 pKa = 4.0DD95 pKa = 3.1AAGGGRR101 pKa = 11.84AAGAGPATEE110 pKa = 6.31GGDD113 pKa = 3.19GWDD116 pKa = 5.5DD117 pKa = 3.54INLDD121 pKa = 3.71EE122 pKa = 5.6LLADD126 pKa = 4.24VAAEE130 pKa = 3.9DD131 pKa = 4.34AEE133 pKa = 4.34RR134 pKa = 5.2

Molecular weight: 14.22 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C5IMW1|A0A0C5IMW1_9VIRU ORF2 OS=Simian torque teno virus 30 OX=1619218 PE=4 SV=1
MM1 pKa = 7.6PYY3 pKa = 7.68WWRR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84RR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84WPRR14 pKa = 11.84RR15 pKa = 11.84RR16 pKa = 11.84RR17 pKa = 11.84WTRR20 pKa = 11.84YY21 pKa = 7.92RR22 pKa = 11.84RR23 pKa = 11.84RR24 pKa = 11.84RR25 pKa = 11.84WMGRR29 pKa = 11.84YY30 pKa = 8.84KK31 pKa = 10.3PRR33 pKa = 11.84RR34 pKa = 11.84ATRR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84RR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84TVRR48 pKa = 11.84RR49 pKa = 11.84RR50 pKa = 11.84FSGYY54 pKa = 6.63TRR56 pKa = 11.84RR57 pKa = 11.84ATRR60 pKa = 11.84RR61 pKa = 11.84RR62 pKa = 11.84GRR64 pKa = 11.84RR65 pKa = 11.84RR66 pKa = 11.84RR67 pKa = 11.84RR68 pKa = 11.84LTVTLKK74 pKa = 9.2QWKK77 pKa = 9.32PEE79 pKa = 3.96TLRR82 pKa = 11.84SLRR85 pKa = 11.84VTGLFPLIVCGSGASRR101 pKa = 11.84NNWIQRR107 pKa = 11.84SFDD110 pKa = 3.43VPGPDD115 pKa = 3.43TPIGGNLSVSVWTMRR130 pKa = 11.84VLYY133 pKa = 9.83EE134 pKa = 3.58EE135 pKa = 4.5WQLHH139 pKa = 5.24RR140 pKa = 11.84NNWSRR145 pKa = 11.84TNSDD149 pKa = 3.65LDD151 pKa = 3.42LVMYY155 pKa = 7.81YY156 pKa = 11.04GCTLKK161 pKa = 10.52FWRR164 pKa = 11.84HH165 pKa = 5.74PYY167 pKa = 9.55VDD169 pKa = 4.46YY170 pKa = 10.37IVKK173 pKa = 10.44YY174 pKa = 10.42IRR176 pKa = 11.84NTPFKK181 pKa = 10.48TEE183 pKa = 4.07EE184 pKa = 3.87LTHH187 pKa = 6.43AAGHH191 pKa = 6.21PMVLMLSKK199 pKa = 10.29HH200 pKa = 5.42HH201 pKa = 6.31VVVPSLLTKK210 pKa = 8.84PHH212 pKa = 4.8GRR214 pKa = 11.84RR215 pKa = 11.84WIKK218 pKa = 9.24VTVRR222 pKa = 11.84PPRR225 pKa = 11.84MLTSKK230 pKa = 10.56FYY232 pKa = 10.56FQSDD236 pKa = 3.69FCNVNLLGIVASACKK251 pKa = 10.34LNSPWLEE258 pKa = 3.73PDD260 pKa = 4.28KK261 pKa = 10.48ITPCITFYY269 pKa = 11.44ALKK272 pKa = 9.24NTVFKK277 pKa = 10.78NQNITEE283 pKa = 4.13AQNAYY288 pKa = 7.72TALTAIIVQNKK299 pKa = 7.48EE300 pKa = 3.39MAYY303 pKa = 8.44NTWLEE308 pKa = 4.15HH309 pKa = 5.51HH310 pKa = 6.85WGSFGNGKK318 pKa = 9.87AFNITNVKK326 pKa = 10.44DD327 pKa = 3.79NSTLTQNQINTLRR340 pKa = 11.84QTAEE344 pKa = 3.64NTFKK348 pKa = 10.91SRR350 pKa = 11.84YY351 pKa = 7.57NFIYY355 pKa = 9.86EE356 pKa = 4.2AQPPTTFTYY365 pKa = 11.11YY366 pKa = 10.88NLHH369 pKa = 5.31GWGLYY374 pKa = 10.02SPLWLDD380 pKa = 3.42PDD382 pKa = 4.21RR383 pKa = 11.84IEE385 pKa = 4.92PEE387 pKa = 3.79SEE389 pKa = 3.72AAFLAVRR396 pKa = 11.84YY397 pKa = 9.9NPLNDD402 pKa = 3.56KK403 pKa = 11.64GEE405 pKa = 4.47GNWVALQPLTKK416 pKa = 9.87EE417 pKa = 4.5LPILDD422 pKa = 4.53DD423 pKa = 3.51TCKK426 pKa = 10.0MVLKK430 pKa = 10.28DD431 pKa = 3.7YY432 pKa = 10.21PLWLILYY439 pKa = 7.08GYY441 pKa = 9.01PDD443 pKa = 4.42AATKK447 pKa = 10.12ILSGSSPLNNTRR459 pKa = 11.84LIIRR463 pKa = 11.84CQYY466 pKa = 9.6TDD468 pKa = 3.88PPLAFPQATDD478 pKa = 3.25YY479 pKa = 11.22KK480 pKa = 10.01RR481 pKa = 11.84GYY483 pKa = 8.43TIYY486 pKa = 10.83SRR488 pKa = 11.84DD489 pKa = 3.43FATGRR494 pKa = 11.84MPGGNTFIPITTARR508 pKa = 11.84LWYY511 pKa = 9.44PRR513 pKa = 11.84LQNQLDD519 pKa = 3.85VVEE522 pKa = 5.8AIVNCGPLMPRR533 pKa = 11.84DD534 pKa = 4.4DD535 pKa = 4.7LHH537 pKa = 7.64QGWAVTMGYY546 pKa = 10.29KK547 pKa = 10.22YY548 pKa = 10.47RR549 pKa = 11.84FQLGGNLPPKK559 pKa = 9.87QDD561 pKa = 3.49PVDD564 pKa = 3.64PCKK567 pKa = 10.74VPKK570 pKa = 10.29RR571 pKa = 11.84EE572 pKa = 4.22LPDD575 pKa = 3.8PSAEE579 pKa = 3.95LTAVQIVDD587 pKa = 4.16PATMDD592 pKa = 4.0PLSTLHH598 pKa = 6.26PWDD601 pKa = 3.77YY602 pKa = 10.46RR603 pKa = 11.84RR604 pKa = 11.84SMLTSSGIKK613 pKa = 10.02RR614 pKa = 11.84MSADD618 pKa = 3.81RR619 pKa = 11.84EE620 pKa = 4.43TDD622 pKa = 2.98SSLYY626 pKa = 10.26PGATGVAKK634 pKa = 10.38RR635 pKa = 11.84PKK637 pKa = 9.92TDD639 pKa = 2.72VPTQKK644 pKa = 10.73GEE646 pKa = 4.03EE647 pKa = 4.16PGPGEE652 pKa = 4.05RR653 pKa = 11.84LRR655 pKa = 11.84EE656 pKa = 3.99VLQSLLEE663 pKa = 4.07EE664 pKa = 4.28QQQEE668 pKa = 4.6TEE670 pKa = 4.97DD671 pKa = 4.32PPSPPPGEE679 pKa = 4.49RR680 pKa = 11.84VQQPEE685 pKa = 4.52LFQQLALRR693 pKa = 11.84YY694 pKa = 8.85QLQQQRR700 pKa = 11.84EE701 pKa = 4.28RR702 pKa = 11.84QGKK705 pKa = 8.09LAQGIKK711 pKa = 11.01YY712 pKa = 7.92MFQQLIKK719 pKa = 8.17TQQGVQVDD727 pKa = 3.9PRR729 pKa = 11.84LLL731 pKa = 4.26

Molecular weight: 85.51 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

990

125

731

330.0

37.89

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.061 ± 1.993

1.717 ± 0.833

4.444 ± 0.717

4.646 ± 0.75

2.424 ± 0.865

6.465 ± 1.645

1.919 ± 0.403

3.232 ± 1.068

5.152 ± 1.101

8.99 ± 1.525

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.919 ± 0.438

3.939 ± 1.034

7.677 ± 0.579

5.455 ± 1.89

10.202 ± 0.881

6.364 ± 3.995

8.081 ± 0.62

4.646 ± 1.044

2.828 ± 0.264

3.838 ± 1.275
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski