Marine Group I thaumarchaeote SCGC AAA799-D07

Taxonomy: cellular organisms; Archaea; TACK group; Thaumarchaeota; Thaumarchaeota incertae sedis; Marine Group I

Average proteome isoelectric point is 6.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 562 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A087S4J2|A0A087S4J2_9ARCH ATP phosphoribosyltransferase OS=Marine Group I thaumarchaeote SCGC AAA799-D07 OX=1502290 GN=hisG PE=4 SV=1
MM1 pKa = 7.23NNEE4 pKa = 4.48LGRR7 pKa = 11.84KK8 pKa = 7.25ITSLTLMTIMFAGGITVAGSSFAFAPYY35 pKa = 9.34MPEE38 pKa = 3.91AMADD42 pKa = 3.56HH43 pKa = 6.89SNDD46 pKa = 3.39AASSGTLSVSSTHH59 pKa = 5.84VMGGAVLGITVNDD72 pKa = 4.13PSIGATDD79 pKa = 3.58QQIAPPSVEE88 pKa = 3.82YY89 pKa = 10.7DD90 pKa = 3.55GQSVDD95 pKa = 3.58MTQMTDD101 pKa = 3.67GTWQAYY107 pKa = 8.97IVDD110 pKa = 4.07HH111 pKa = 5.74EE112 pKa = 4.91TVVGLDD118 pKa = 2.95GDD120 pKa = 4.15MEE122 pKa = 4.69NDD124 pKa = 3.26NDD126 pKa = 4.35SGFQYY131 pKa = 10.85GVYY134 pKa = 9.96CDD136 pKa = 4.35SGLGAQGVSAGTGNYY151 pKa = 10.09DD152 pKa = 3.29SAGSLDD158 pKa = 4.16SDD160 pKa = 3.36ITTNPSFYY168 pKa = 10.4EE169 pKa = 4.54GWHH172 pKa = 5.94GGGAKK177 pKa = 10.27GKK179 pKa = 10.59GGGFGQTQYY188 pKa = 11.41CQDD191 pKa = 3.55TVDD194 pKa = 4.0AGDD197 pKa = 4.58GIGGGQVKK205 pKa = 9.79FSVLLDD211 pKa = 3.76APTLNTNSGTGTNNSGNRR229 pKa = 11.84NIMVNATTNLSAWPFIQAINFSSTADD255 pKa = 3.07VDD257 pKa = 4.02YY258 pKa = 10.71GAEE261 pKa = 4.15SVTVEE266 pKa = 4.09WGNDD270 pKa = 2.91HH271 pKa = 6.87DD272 pKa = 4.38TSISVDD278 pKa = 3.3RR279 pKa = 11.84DD280 pKa = 3.36IVPDD284 pKa = 3.45NAEE287 pKa = 3.56IHH289 pKa = 5.7LTIVDD294 pKa = 3.91PGLNYY299 pKa = 10.85DD300 pKa = 4.02PTNEE304 pKa = 4.63DD305 pKa = 2.86VWIMDD310 pKa = 4.12AAQEE314 pKa = 3.97TLYY317 pKa = 10.61FYY319 pKa = 11.42NNGSIGEE326 pKa = 4.34KK327 pKa = 9.17NTAQLPTQGASSALTGGEE345 pKa = 3.63ISIDD349 pKa = 3.4GTNNSVIDD357 pKa = 3.72ATTLGNLGCGDD368 pKa = 3.86NCLLSVGGSPKK379 pKa = 10.57NVISTNSSKK388 pKa = 11.07SHH390 pKa = 6.47FGFANITLTEE400 pKa = 4.24TGDD403 pKa = 3.41NTGVFTTFDD412 pKa = 3.5GQTGVSSLKK421 pKa = 10.23SATDD425 pKa = 3.42AGVDD429 pKa = 3.53SQMTFSYY436 pKa = 10.88NGDD439 pKa = 3.46SVTLVIGYY447 pKa = 9.6NDD449 pKa = 3.43ASATFTAGDD458 pKa = 2.93AWLPVEE464 pKa = 4.37DD465 pKa = 4.32AVYY468 pKa = 9.78TITDD472 pKa = 3.38PDD474 pKa = 3.75MNKK477 pKa = 10.09NSLDD481 pKa = 4.82DD482 pKa = 3.72EE483 pKa = 4.54TLDD486 pKa = 4.63IGDD489 pKa = 3.7PHH491 pKa = 8.15DD492 pKa = 5.62RR493 pKa = 11.84IPTIITGSPIHH504 pKa = 6.59VSDD507 pKa = 4.3RR508 pKa = 11.84VSTTARR514 pKa = 11.84EE515 pKa = 4.08HH516 pKa = 7.17SVGQQSLAHH525 pKa = 6.15SSVALSTGSSAANDD539 pKa = 3.33VFYY542 pKa = 8.51TTFASNTTDD551 pKa = 2.64NSKK554 pKa = 10.47RR555 pKa = 11.84IKK557 pKa = 10.69VVVNGIGGGAPTDD570 pKa = 3.76AEE572 pKa = 4.77LNTITWLNVTTDD584 pKa = 3.54IAPSEE589 pKa = 4.04LVDD592 pKa = 4.88LEE594 pKa = 4.48GTVALQYY601 pKa = 10.37DD602 pKa = 3.67ISGIAGALGSTDD614 pKa = 2.34IDD616 pKa = 3.67AYY618 pKa = 11.26VMHH621 pKa = 6.6EE622 pKa = 4.51TVGSTGSEE630 pKa = 3.85PGKK633 pKa = 9.48TMNGTAAIATNVISIVSSGNSASGIFDD660 pKa = 5.14LDD662 pKa = 3.65DD663 pKa = 3.7TTGDD667 pKa = 3.48TAGDD671 pKa = 3.71ATIDD675 pKa = 3.39SAATQKK681 pKa = 10.98VGVNGVEE688 pKa = 4.4DD689 pKa = 3.35AWGVANTNNAVAIVFQITHH708 pKa = 6.74PAGNTLAANGTCAPGGAGHH727 pKa = 7.6DD728 pKa = 3.42KK729 pKa = 11.4GCFGEE734 pKa = 4.28YY735 pKa = 10.14AIALDD740 pKa = 4.27FVNWDD745 pKa = 3.35QDD747 pKa = 3.6NSSKK751 pKa = 10.47SQNGIYY757 pKa = 10.03RR758 pKa = 11.84LEE760 pKa = 4.81AGEE763 pKa = 4.43TGDD766 pKa = 3.4NTGVFTGTVAYY777 pKa = 10.16AILNNSTMITASGDD791 pKa = 3.46PGGSSGFTRR800 pKa = 11.84GGHH803 pKa = 5.78SGNAEE808 pKa = 4.22PEE810 pKa = 4.23PGSAGGVPAPSPSFNGDD827 pKa = 3.16EE828 pKa = 4.4LLVLLGKK835 pKa = 10.33GQTGIDD841 pKa = 3.51APRR844 pKa = 11.84VNINDD849 pKa = 3.54SDD851 pKa = 4.43TVGGTGTTLGVQLDD865 pKa = 4.4ANDD868 pKa = 3.72HH869 pKa = 5.73TGVAEE874 pKa = 4.53FDD876 pKa = 3.73LSSYY880 pKa = 10.64GADD883 pKa = 3.29DD884 pKa = 3.61TATITITDD892 pKa = 4.21LDD894 pKa = 4.5LNQDD898 pKa = 3.33NEE900 pKa = 4.02QRR902 pKa = 11.84EE903 pKa = 4.74VYY905 pKa = 9.09TNSSGTFQIMIDD917 pKa = 4.29DD918 pKa = 5.54DD919 pKa = 5.1DD920 pKa = 4.5SQLLGDD926 pKa = 3.66QVIIEE931 pKa = 4.3TSSNSGVFSGTFVVPNKK948 pKa = 9.97LGKK951 pKa = 10.25DD952 pKa = 3.54MEE954 pKa = 4.35LQYY957 pKa = 11.1YY958 pKa = 10.7DD959 pKa = 4.94SVDD962 pKa = 3.38QSGEE966 pKa = 3.79DD967 pKa = 3.24STTYY971 pKa = 10.77DD972 pKa = 3.3VASIASNLGTVALDD986 pKa = 3.29RR987 pKa = 11.84TSYY990 pKa = 9.56PVPYY994 pKa = 10.32LADD997 pKa = 3.48QLDD1000 pKa = 3.95EE1001 pKa = 4.63GDD1003 pKa = 3.76NTTMTVAKK1011 pKa = 9.49GNVVGTITVTDD1022 pKa = 4.19PDD1024 pKa = 3.56ATADD1028 pKa = 3.62TFTTSTNANSCEE1040 pKa = 3.86AGKK1043 pKa = 10.99VKK1045 pKa = 10.73VKK1047 pKa = 10.77LSGTFVYY1054 pKa = 9.43TAAGSCATAATSTAAQEE1071 pKa = 4.29LGALTEE1077 pKa = 4.31TAQGSGSYY1085 pKa = 10.26EE1086 pKa = 3.63IDD1088 pKa = 3.42FTIGGAACGGSNSGTCQTAQTGVNAVPVNSTSILQVEE1125 pKa = 4.95YY1126 pKa = 10.58IDD1128 pKa = 4.1TADD1131 pKa = 3.53SAGATTTVYY1140 pKa = 11.0DD1141 pKa = 3.52SAIFEE1146 pKa = 4.55LHH1148 pKa = 5.9TATLSVDD1155 pKa = 2.85KK1156 pKa = 10.68DD1157 pKa = 3.99VYY1159 pKa = 11.03ILGQDD1164 pKa = 3.48AVITLSDD1171 pKa = 4.09LDD1173 pKa = 4.63LNLDD1177 pKa = 3.53ADD1179 pKa = 4.58EE1180 pKa = 4.77IEE1182 pKa = 4.48QYY1184 pKa = 10.73DD1185 pKa = 3.9LRR1187 pKa = 11.84LIEE1190 pKa = 4.41WDD1192 pKa = 3.32SDD1194 pKa = 3.87NNSSVLLHH1202 pKa = 6.71SSHH1205 pKa = 6.28CTSGCTLDD1213 pKa = 4.05PSNLTEE1219 pKa = 4.07TGKK1222 pKa = 8.7NTGVFQTVFTIPTSMSDD1239 pKa = 2.95TGAAATSSEE1248 pKa = 4.1MGDD1251 pKa = 3.63EE1252 pKa = 4.5VILTYY1257 pKa = 10.15RR1258 pKa = 11.84DD1259 pKa = 3.32RR1260 pKa = 11.84GLSGEE1265 pKa = 4.11KK1266 pKa = 10.25SYY1268 pKa = 11.87GDD1270 pKa = 4.15DD1271 pKa = 3.77EE1272 pKa = 6.47LDD1274 pKa = 3.57VEE1276 pKa = 4.71ATFSISKK1283 pKa = 10.15FGAIVEE1289 pKa = 4.18LDD1291 pKa = 3.23KK1292 pKa = 11.37AVYY1295 pKa = 9.99DD1296 pKa = 3.77WTDD1299 pKa = 2.9TVYY1302 pKa = 9.41ITVTAPDD1309 pKa = 3.55WNQNSNSEE1317 pKa = 4.21EE1318 pKa = 4.34TIGTSALPINANTRR1332 pKa = 11.84NGKK1335 pKa = 8.98LCSGTNTYY1343 pKa = 8.44TLNEE1347 pKa = 4.05TDD1349 pKa = 3.59EE1350 pKa = 4.38NTGVFDD1356 pKa = 5.34GEE1358 pKa = 3.95IALTGFAHH1366 pKa = 6.74TMATSQSYY1374 pKa = 8.36TPVADD1379 pKa = 3.57ACSGNTDD1386 pKa = 3.77GKK1388 pKa = 10.79LQTAGNMDD1396 pKa = 5.51GITVSYY1402 pKa = 10.04EE1403 pKa = 3.62WVDD1406 pKa = 3.29NSIAIASAIIQWNIGEE1422 pKa = 4.19VEE1424 pKa = 4.19IVDD1427 pKa = 4.29SAVSPNGSTVIRR1439 pKa = 11.84VTDD1442 pKa = 3.37VDD1444 pKa = 3.83EE1445 pKa = 6.37DD1446 pKa = 3.74IDD1448 pKa = 4.07STIVDD1453 pKa = 3.85TFKK1456 pKa = 11.23VDD1458 pKa = 3.33VFSDD1462 pKa = 3.51SDD1464 pKa = 3.64SGGFQATVSEE1474 pKa = 4.48TGEE1477 pKa = 4.08GTGVFEE1483 pKa = 5.21AIIYY1487 pKa = 7.56FTDD1490 pKa = 3.35EE1491 pKa = 4.13TATSGLTLRR1500 pKa = 11.84VAEE1503 pKa = 4.5GDD1505 pKa = 4.01TVTVEE1510 pKa = 4.23YY1511 pKa = 10.77TDD1513 pKa = 3.46VTLPGPDD1520 pKa = 3.54YY1521 pKa = 8.25TTADD1525 pKa = 5.12DD1526 pKa = 3.51ITIAATTTVGTTTPPLEE1543 pKa = 4.3RR1544 pKa = 11.84APAANARR1551 pKa = 11.84VVDD1554 pKa = 3.99AFGSSVAEE1562 pKa = 3.88VSVDD1566 pKa = 3.47QQVQIAADD1574 pKa = 3.51VANAQSKK1581 pKa = 7.96EE1582 pKa = 3.68QSFAYY1587 pKa = 9.96LVQVQDD1593 pKa = 3.86ANGVTVSLAWITGSLNAGQSMSPALSWTPSASGSYY1628 pKa = 8.8TATVFVWEE1636 pKa = 4.51SVDD1639 pKa = 3.6NPVALSPTVTVGIDD1653 pKa = 3.28VVV1655 pKa = 3.56

Molecular weight:
171.2 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A087S4D8|A0A087S4D8_9ARCH Uncharacterized protein OS=Marine Group I thaumarchaeote SCGC AAA799-D07 OX=1502290 GN=AAA799D07_00253 PE=4 SV=1
MM1 pKa = 7.59CGKK4 pKa = 10.63LMATSKK10 pKa = 10.69AKK12 pKa = 10.46RR13 pKa = 11.84SAAAKK18 pKa = 9.55KK19 pKa = 9.82AARR22 pKa = 11.84TRR24 pKa = 11.84KK25 pKa = 9.66RR26 pKa = 11.84NAAKK30 pKa = 10.3RR31 pKa = 11.84KK32 pKa = 9.03AAAKK36 pKa = 9.77KK37 pKa = 9.77AAAKK41 pKa = 9.87RR42 pKa = 11.84KK43 pKa = 9.32RR44 pKa = 11.84RR45 pKa = 11.84AAAKK49 pKa = 9.94KK50 pKa = 9.75GGRR53 pKa = 11.84KK54 pKa = 9.42RR55 pKa = 11.84GGAKK59 pKa = 10.09KK60 pKa = 10.42KK61 pKa = 10.39GGKK64 pKa = 8.45KK65 pKa = 9.61RR66 pKa = 11.84KK67 pKa = 8.19AAKK70 pKa = 9.78RR71 pKa = 11.84KK72 pKa = 6.67PAKK75 pKa = 9.55RR76 pKa = 11.84RR77 pKa = 11.84RR78 pKa = 11.84RR79 pKa = 3.56

Molecular weight:
8.62 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

562

0

562

133761

20

1655

238.0

26.67

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.02 ± 0.111

1.097 ± 0.041

5.709 ± 0.09

6.503 ± 0.106

4.395 ± 0.08

6.54 ± 0.105

1.844 ± 0.044

9.169 ± 0.107

8.997 ± 0.159

8.745 ± 0.123

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.557 ± 0.048

5.367 ± 0.098

3.643 ± 0.071

2.885 ± 0.058

3.52 ± 0.076

7.026 ± 0.092

5.564 ± 0.104

6.393 ± 0.084

0.896 ± 0.04

3.127 ± 0.066

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski