Acidianus tailed spindle virus

Taxonomy: Viruses; Bicaudaviridae; unclassified Bicaudaviridae

Average proteome isoelectric point is 6.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 95 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A125SJA0|A0A125SJA0_9VIRU Uncharacterized protein OS=Acidianus tailed spindle virus OX=1797140 GN=ATSV_C110 PE=4 SV=1
MM1 pKa = 8.13DD2 pKa = 4.18YY3 pKa = 11.31EE4 pKa = 4.76EE5 pKa = 4.82VIQTIKK11 pKa = 11.01EE12 pKa = 4.03FFNSKK17 pKa = 9.51NAEE20 pKa = 4.18FNVGQPQKK28 pKa = 9.85TEE30 pKa = 3.84NNTISIVVDD39 pKa = 4.45FKK41 pKa = 11.69EE42 pKa = 4.58PIEE45 pKa = 4.09LTEE48 pKa = 4.04EE49 pKa = 4.46EE50 pKa = 4.71YY51 pKa = 11.37DD52 pKa = 4.18DD53 pKa = 6.62LYY55 pKa = 11.76DD56 pKa = 4.56FLDD59 pKa = 3.63NLGFYY64 pKa = 9.85PINGAEE70 pKa = 4.01NQVNNYY76 pKa = 9.09IGYY79 pKa = 8.94KK80 pKa = 8.96SWVGVDD86 pKa = 3.3EE87 pKa = 4.99FEE89 pKa = 5.34NDD91 pKa = 3.79DD92 pKa = 3.63GDD94 pKa = 4.1EE95 pKa = 4.37VIVYY99 pKa = 6.76YY100 pKa = 10.4TKK102 pKa = 10.67VCTGGKK108 pKa = 5.06TTFFIKK114 pKa = 10.41KK115 pKa = 9.65IEE117 pKa = 4.04VEE119 pKa = 4.43LNIQEE124 pKa = 4.35NTNEE128 pKa = 3.9LL129 pKa = 3.64

Molecular weight: 15.01 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A125SJ73|A0A125SJ73_9VIRU Transposase OS=Acidianus tailed spindle virus OX=1797140 GN=ATSV_D194 PE=4 SV=1
MM1 pKa = 7.63LKK3 pKa = 10.16NLRR6 pKa = 11.84LNNFQPQEE14 pKa = 3.94EE15 pKa = 4.88YY16 pKa = 11.31VYY18 pKa = 10.04LTYY21 pKa = 10.96SLKK24 pKa = 10.68NNKK27 pKa = 9.32KK28 pKa = 9.75EE29 pKa = 3.86EE30 pKa = 4.19TKK32 pKa = 10.47ILLEE36 pKa = 4.06NYY38 pKa = 9.45RR39 pKa = 11.84VLLQKK44 pKa = 10.95ALDD47 pKa = 3.91WLWEE51 pKa = 3.91RR52 pKa = 11.84TKK54 pKa = 10.44IEE56 pKa = 3.96RR57 pKa = 11.84KK58 pKa = 8.19EE59 pKa = 3.86VKK61 pKa = 9.72KK62 pKa = 10.82GKK64 pKa = 10.03KK65 pKa = 9.5VLTKK69 pKa = 10.47IKK71 pKa = 9.29ITLPKK76 pKa = 9.92KK77 pKa = 9.49KK78 pKa = 9.66EE79 pKa = 3.93VYY81 pKa = 8.41KK82 pKa = 9.68TLRR85 pKa = 11.84DD86 pKa = 3.61EE87 pKa = 4.34LEE89 pKa = 4.81KK90 pKa = 10.68INKK93 pKa = 8.53LASHH97 pKa = 6.23YY98 pKa = 9.95VDD100 pKa = 4.19KK101 pKa = 11.03AISDD105 pKa = 3.9AYY107 pKa = 10.98SILNSWRR114 pKa = 11.84RR115 pKa = 11.84RR116 pKa = 11.84AEE118 pKa = 3.76KK119 pKa = 10.6GQASLRR125 pKa = 11.84KK126 pKa = 7.41PTLRR130 pKa = 11.84KK131 pKa = 9.31VYY133 pKa = 10.39VRR135 pKa = 11.84VKK137 pKa = 8.49STLRR141 pKa = 11.84KK142 pKa = 9.86VEE144 pKa = 4.12GEE146 pKa = 4.14SVRR149 pKa = 11.84ITVRR153 pKa = 11.84PYY155 pKa = 10.63EE156 pKa = 4.1YY157 pKa = 10.28VTFSWSHH164 pKa = 4.22KK165 pKa = 7.46WFSRR169 pKa = 11.84RR170 pKa = 11.84VEE172 pKa = 3.99GLEE175 pKa = 3.98LGEE178 pKa = 4.16PVIKK182 pKa = 9.84EE183 pKa = 4.33DD184 pKa = 4.34KK185 pKa = 9.11VHH187 pKa = 6.98LPFRR191 pKa = 11.84YY192 pKa = 9.32KK193 pKa = 10.86LPWSTPLDD201 pKa = 3.83FLSIDD206 pKa = 3.76SNLYY210 pKa = 9.01TLDD213 pKa = 4.08AYY215 pKa = 10.67DD216 pKa = 3.83GEE218 pKa = 4.4KK219 pKa = 10.57FITFSMKK226 pKa = 10.05EE227 pKa = 4.0LYY229 pKa = 9.96SLKK232 pKa = 10.43FGMEE236 pKa = 4.69LKK238 pKa = 10.54RR239 pKa = 11.84SRR241 pKa = 11.84IQSFASKK248 pKa = 9.93HH249 pKa = 4.16GRR251 pKa = 11.84KK252 pKa = 9.81GKK254 pKa = 10.36VLMRR258 pKa = 11.84KK259 pKa = 8.65YY260 pKa = 10.38SHH262 pKa = 6.9RR263 pKa = 11.84EE264 pKa = 3.34RR265 pKa = 11.84NRR267 pKa = 11.84VLDD270 pKa = 3.91YY271 pKa = 10.86VHH273 pKa = 6.99KK274 pKa = 10.32FVNKK278 pKa = 9.9LLEE281 pKa = 4.49IYY283 pKa = 9.69PVTIFAVEE291 pKa = 4.11KK292 pKa = 10.65LNKK295 pKa = 9.8QSMFQDD301 pKa = 3.79ANDD304 pKa = 3.95KK305 pKa = 10.71LSKK308 pKa = 10.25KK309 pKa = 9.4VSRR312 pKa = 11.84TVWRR316 pKa = 11.84TIHH319 pKa = 6.99RR320 pKa = 11.84VLKK323 pKa = 10.56YY324 pKa = 9.9KK325 pKa = 10.85APLYY329 pKa = 10.4GSFVKK334 pKa = 10.51EE335 pKa = 3.95VDD337 pKa = 3.07PHH339 pKa = 5.85LTSKK343 pKa = 10.44SCPRR347 pKa = 11.84CGWVSRR353 pKa = 11.84KK354 pKa = 9.12VGRR357 pKa = 11.84TFRR360 pKa = 11.84CEE362 pKa = 3.49RR363 pKa = 11.84CGFTLDD369 pKa = 3.48RR370 pKa = 11.84QLNASLNIYY379 pKa = 10.63LKK381 pKa = 9.76MCGFPHH387 pKa = 7.05ILGIPRR393 pKa = 11.84LWVGVIPLKK402 pKa = 10.52GRR404 pKa = 11.84RR405 pKa = 11.84GNGFPRR411 pKa = 11.84DD412 pKa = 3.65SVEE415 pKa = 4.03AQGLRR420 pKa = 11.84IDD422 pKa = 3.38IKK424 pKa = 10.96YY425 pKa = 10.77YY426 pKa = 10.66EE427 pKa = 4.16ILL429 pKa = 4.02

Molecular weight: 50.89 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

95

0

95

20891

45

2246

219.9

25.11

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.82 ± 0.249

1.063 ± 0.101

5.194 ± 0.261

6.596 ± 0.418

4.471 ± 0.284

4.562 ± 0.224

1.225 ± 0.115

9.296 ± 0.331

8.027 ± 0.537

9.913 ± 0.327

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.02 ± 0.138

6.28 ± 0.314

3.695 ± 0.301

3.049 ± 0.327

3.59 ± 0.39

7.467 ± 0.661

5.572 ± 0.475

6.989 ± 0.27

0.723 ± 0.094

5.447 ± 0.199
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski