Oidiodendron maius Zn

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Leotiomycetes; Leotiomycetes incertae sedis; Myxotrichaceae; Oidiodendron; Oidiodendron maius

Average proteome isoelectric point is 6.41

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 16697 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C3HHE7|A0A0C3HHE7_9PEZI Uncharacterized protein OS=Oidiodendron maius Zn OX=913774 GN=OIDMADRAFT_52384 PE=4 SV=1
MM1 pKa = 7.56SNYY4 pKa = 10.11DD5 pKa = 3.5DD6 pKa = 3.98SSYY9 pKa = 11.65GSGGRR14 pKa = 11.84NQDD17 pKa = 2.58SDD19 pKa = 3.77NFGSGNQDD27 pKa = 2.73SGNQGSGGFGSSGGRR42 pKa = 11.84GGGDD46 pKa = 2.92SYY48 pKa = 12.06GSGNQGSDD56 pKa = 3.03GFGSGGRR63 pKa = 11.84GGGDD67 pKa = 3.17SYY69 pKa = 12.02SSGNQGSDD77 pKa = 2.91SYY79 pKa = 12.11GSGNQGSDD87 pKa = 3.12GFSSGGIGGGDD98 pKa = 3.2SYY100 pKa = 12.06GSGNQGSVGVGSGGRR115 pKa = 11.84NKK117 pKa = 10.93DD118 pKa = 2.84SDD120 pKa = 3.87NFGSSNTDD128 pKa = 2.58SYY130 pKa = 12.09GSGNQGGDD138 pKa = 3.08SYY140 pKa = 12.05GSGNQGGGSYY150 pKa = 11.15GSGNQGGDD158 pKa = 3.08SYY160 pKa = 12.05GSGNQGGGSYY170 pKa = 11.03GSGGRR175 pKa = 11.84SGSDD179 pKa = 2.84STTGKK184 pKa = 10.08ILEE187 pKa = 4.3KK188 pKa = 10.6AGNLFGSDD196 pKa = 3.01GLAQKK201 pKa = 9.14GQQMRR206 pKa = 11.84DD207 pKa = 3.04NSGSNNDD214 pKa = 3.54YY215 pKa = 11.47

Molecular weight: 20.4 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C3HF00|A0A0C3HF00_9PEZI Uncharacterized protein OS=Oidiodendron maius Zn OX=913774 GN=OIDMADRAFT_103618 PE=4 SV=1
MM1 pKa = 7.29VSRR4 pKa = 11.84LRR6 pKa = 11.84RR7 pKa = 11.84RR8 pKa = 11.84DD9 pKa = 3.58RR10 pKa = 11.84IVEE13 pKa = 4.21STRR16 pKa = 11.84PTLMTRR22 pKa = 11.84LRR24 pKa = 11.84GPNARR29 pKa = 11.84KK30 pKa = 8.69RR31 pKa = 11.84TVKK34 pKa = 8.07TTTKK38 pKa = 10.06VVPANTLQGHH48 pKa = 5.57NHH50 pKa = 4.82VQAHH54 pKa = 4.8THH56 pKa = 4.69NTRR59 pKa = 11.84ASGMGLGRR67 pKa = 11.84GRR69 pKa = 11.84RR70 pKa = 11.84TAKK73 pKa = 10.04PVAQRR78 pKa = 11.84RR79 pKa = 11.84RR80 pKa = 11.84RR81 pKa = 11.84VSLGDD86 pKa = 3.63KK87 pKa = 10.68VSGAMMKK94 pKa = 10.51LRR96 pKa = 11.84GTLTNKK102 pKa = 10.0PGVKK106 pKa = 9.97AAGTRR111 pKa = 11.84RR112 pKa = 11.84MHH114 pKa = 5.38GHH116 pKa = 5.97RR117 pKa = 11.84WMGG120 pKa = 3.07

Molecular weight: 13.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

16696

1

16697

7153503

49

5138

428.4

47.49

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.287 ± 0.017

1.358 ± 0.008

5.457 ± 0.012

5.953 ± 0.017

3.914 ± 0.011

6.941 ± 0.018

2.321 ± 0.009

5.625 ± 0.014

4.742 ± 0.016

9.267 ± 0.021

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.174 ± 0.006

3.869 ± 0.01

5.58 ± 0.019

3.857 ± 0.013

5.724 ± 0.018

8.233 ± 0.023

5.998 ± 0.013

6.108 ± 0.016

1.594 ± 0.008

2.999 ± 0.008
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski