Atlantic salmon swim bladder sarcoma virus
Average proteome isoelectric point is 6.7
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|Q2VF31|Q2VF31_9RETR Leader peptide OS=Atlantic salmon swim bladder sarcoma virus OX=348296 GN=LP PE=4 SV=1
MM1 pKa = 6.9 QCNVTNCMIIWDD13 pKa = 4.46 TIHH16 pKa = 7.61 RR17 pKa = 11.84 CRR19 pKa = 11.84 QRR21 pKa = 11.84 PNEE24 pKa = 4.02 EE25 pKa = 3.7
Molecular weight: 3.09 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 6.154
IPC2_protein 6.109
IPC_protein 6.364
Toseland 6.237
ProMoST 5.55
Dawson 6.825
Bjellqvist 6.517
Wikipedia 6.795
Rodwell 6.795
Grimsley 6.262
Solomon 6.898
Lehninger 6.912
Nozaki 6.898
DTASelect 7.073
Thurlkill 7.102
EMBOSS 7.176
Sillero 7.205
Patrickios 3.719
IPC_peptide 6.912
IPC2_peptide 7.176
IPC2.peptide.svr19 7.196
Protein with the highest isoelectric point:
>tr|Q2VF31|Q2VF31_9RETR Leader peptide OS=Atlantic salmon swim bladder sarcoma virus OX=348296 GN=LP PE=4 SV=1
MM1 pKa = 7.85 ASSQPLKK8 pKa = 10.48 MKK10 pKa = 10.59 FSEE13 pKa = 4.32 YY14 pKa = 10.35 LDD16 pKa = 3.54 QRR18 pKa = 11.84 MQDD21 pKa = 3.07 RR22 pKa = 11.84 AGGKK26 pKa = 7.42 VQWKK30 pKa = 8.38 DD31 pKa = 3.27 HH32 pKa = 5.68 KK33 pKa = 11.03 KK34 pKa = 8.58 VWEE37 pKa = 4.01 RR38 pKa = 11.84 LKK40 pKa = 11.09 LRR42 pKa = 11.84 WTQEE46 pKa = 3.63 GYY48 pKa = 10.65 LAGGAPTRR56 pKa = 11.84 VQLSTMEE63 pKa = 4.24 GEE65 pKa = 4.06 LRR67 pKa = 11.84 EE68 pKa = 4.4 GKK70 pKa = 9.52 QRR72 pKa = 11.84 AKK74 pKa = 10.83 DD75 pKa = 3.67 SEE77 pKa = 4.18 VDD79 pKa = 3.55 LNRR82 pKa = 11.84 QHH84 pKa = 6.41 VFRR87 pKa = 11.84 KK88 pKa = 9.72 EE89 pKa = 3.73 GTKK92 pKa = 9.7 QRR94 pKa = 11.84 EE95 pKa = 4.04 KK96 pKa = 11.15 AEE98 pKa = 3.97 EE99 pKa = 3.95 EE100 pKa = 4.02 LRR102 pKa = 11.84 IGTWAIEE109 pKa = 3.89 EE110 pKa = 4.07 TRR112 pKa = 11.84 RR113 pKa = 11.84 FIMLRR118 pKa = 11.84 TPAVMGIATDD128 pKa = 3.67 MKK130 pKa = 10.39 EE131 pKa = 4.12 GGVPTISPATPAEE144 pKa = 4.14 NQTPTQRR151 pKa = 11.84 LYY153 pKa = 10.54 PDD155 pKa = 3.98 LPEE158 pKa = 5.15 DD159 pKa = 3.92 SRR161 pKa = 11.84 PPPYY165 pKa = 10.37 SPSASPSPTVQAPVLTVRR183 pKa = 11.84 GGVIKK188 pKa = 11.05 GEE190 pKa = 4.03 VHH192 pKa = 6.25 LVEE195 pKa = 4.14 GTIDD199 pKa = 3.73 VEE201 pKa = 4.39 NSEE204 pKa = 4.26 PPQRR208 pKa = 11.84 SMDD211 pKa = 3.77 TDD213 pKa = 3.77 DD214 pKa = 5.23 LGPAGGRR221 pKa = 11.84 STRR224 pKa = 11.84 GPDD227 pKa = 3.3 SLEE230 pKa = 4.13 EE231 pKa = 4.17 GSMRR235 pKa = 11.84 TQSSKK240 pKa = 8.67 RR241 pKa = 11.84 TRR243 pKa = 11.84 NPFLDD248 pKa = 3.84 QPFSSPPPSGSLSYY262 pKa = 10.77 RR263 pKa = 11.84 PLPQSLPSPLSRR275 pKa = 11.84 AVTTPHH281 pKa = 7.02 SYY283 pKa = 9.71 TGEE286 pKa = 4.07 HH287 pKa = 4.9 QQLRR291 pKa = 11.84 QNDD294 pKa = 3.3 IDD296 pKa = 4.46 RR297 pKa = 11.84 EE298 pKa = 4.25 YY299 pKa = 9.92 LTSYY303 pKa = 11.32 NMPQEE308 pKa = 4.11 EE309 pKa = 4.98 DD310 pKa = 3.78 EE311 pKa = 4.68 NDD313 pKa = 3.69 PAPTQEE319 pKa = 4.5 QIWTAAEE326 pKa = 3.79 QLNRR330 pKa = 11.84 EE331 pKa = 4.18 QFPSGGGGPYY341 pKa = 8.98 QLRR344 pKa = 11.84 GTFLGEE350 pKa = 4.07 VQDD353 pKa = 4.4 LQTEE357 pKa = 4.83 LSQPGPRR364 pKa = 11.84 RR365 pKa = 11.84 SQRR368 pKa = 11.84 LIEE371 pKa = 4.26 QRR373 pKa = 11.84 NRR375 pKa = 11.84 THH377 pKa = 6.39 LQAPLRR383 pKa = 11.84 LCATGRR389 pKa = 11.84 GEE391 pKa = 5.54 QYY393 pKa = 11.1 SPWKK397 pKa = 9.45 LTDD400 pKa = 3.54 LTSMMEE406 pKa = 4.08 QLPSLHH412 pKa = 6.62 GGASAWLLQLQTLTSGFRR430 pKa = 11.84 LGLGDD435 pKa = 3.87 MRR437 pKa = 11.84 ALLARR442 pKa = 11.84 ATDD445 pKa = 3.83 HH446 pKa = 5.66 VTMNVIMKK454 pKa = 8.67 TAGLDD459 pKa = 3.55 HH460 pKa = 7.15 LPGPTPPEE468 pKa = 4.82 VYY470 pKa = 9.75 TGPLWAEE477 pKa = 3.88 LRR479 pKa = 11.84 RR480 pKa = 11.84 NYY482 pKa = 8.58 PTEE485 pKa = 3.83 RR486 pKa = 11.84 DD487 pKa = 3.53 YY488 pKa = 11.94 AALSSFLMNPGEE500 pKa = 4.57 GPAEE504 pKa = 3.81 YY505 pKa = 10.36 LDD507 pKa = 3.68 RR508 pKa = 11.84 AKK510 pKa = 8.46 TTWRR514 pKa = 11.84 TVHH517 pKa = 6.63 GEE519 pKa = 3.72 PHH521 pKa = 6.7 DD522 pKa = 4.39 ASEE525 pKa = 4.48 TSLNMWKK532 pKa = 10.19 EE533 pKa = 3.85 VVINGTPAPVKK544 pKa = 10.4 AKK546 pKa = 10.32 LRR548 pKa = 11.84 QTVGLCSKK556 pKa = 10.54 SKK558 pKa = 11.39 AEE560 pKa = 4.2 FCSHH564 pKa = 4.59 VHH566 pKa = 4.96 HH567 pKa = 7.36 HH568 pKa = 6.93 ISQHH572 pKa = 5.85 HH573 pKa = 6.59 KK574 pKa = 10.29 DD575 pKa = 3.34 AGGAEE580 pKa = 4.26 SEE582 pKa = 4.25 IKK584 pKa = 10.51 ALQVQLLKK592 pKa = 11.05 LQLKK596 pKa = 9.49 DD597 pKa = 3.52 AQKK600 pKa = 8.95 TAQPKK605 pKa = 8.6 KK606 pKa = 10.51 QMVEE610 pKa = 3.97 GAVPLPQLVHH620 pKa = 5.44 EE621 pKa = 4.86 TVKK624 pKa = 10.85 QMLATPSPNPAPYY637 pKa = 8.92 PQPPYY642 pKa = 10.35 QPPPPPLSPQYY653 pKa = 8.47 PQAYY657 pKa = 8.26 PGYY660 pKa = 9.39 GYY662 pKa = 9.51 PPRR665 pKa = 11.84 GPPQAGGHH673 pKa = 5.24 WGSRR677 pKa = 11.84 YY678 pKa = 9.05 MNNGACYY685 pKa = 9.77 NCGQPGHH692 pKa = 5.68 QARR695 pKa = 11.84 NCPLPQTDD703 pKa = 3.22 SQRR706 pKa = 11.84 RR707 pKa = 11.84 FLLNRR712 pKa = 11.84 SQGQAGRR719 pKa = 11.84 GRR721 pKa = 11.84 GQPRR725 pKa = 11.84 GPLRR729 pKa = 11.84 APQPIPAPYY738 pKa = 10.09 SPAGPSLPFQGMYY751 pKa = 10.74 DD752 pKa = 4.83 DD753 pKa = 3.9 NTPWEE758 pKa = 4.52 XRR760 pKa = 11.84 CPPPPEE766 pKa = 6.08 AEE768 pKa = 4.0 VQRR771 pKa = 11.84 YY772 pKa = 7.59 SVYY775 pKa = 10.23 TEE777 pKa = 4.02 PTVSCQIEE785 pKa = 4.63 GVNHH789 pKa = 6.75 RR790 pKa = 11.84 FLVDD794 pKa = 3.44 TGCTYY799 pKa = 11.16 SAIKK803 pKa = 9.55 TMQPLSMDD811 pKa = 4.53 SIQVVGVSGRR821 pKa = 11.84 PEE823 pKa = 4.17 TQLKK827 pKa = 6.51 TQPLLFRR834 pKa = 11.84 WGPSTVRR841 pKa = 11.84 HH842 pKa = 5.12 QFLYY846 pKa = 10.87 CPNCPINLLGRR857 pKa = 11.84 DD858 pKa = 3.79 LLCRR862 pKa = 11.84 LGCFINLTEE871 pKa = 5.25 DD872 pKa = 3.51 GVEE875 pKa = 3.98 VSINSPKK882 pKa = 10.27 SGRR885 pKa = 11.84 VLLLPSLPVPPLSLTQEE902 pKa = 4.48 VYY904 pKa = 9.11 WLKK907 pKa = 9.8 CTQTGPSTPAIQFQFNTWRR926 pKa = 11.84 RR927 pKa = 11.84 LIYY930 pKa = 10.35 ALHH933 pKa = 7.07 PYY935 pKa = 7.62 KK936 pKa = 10.63 TPLPEE941 pKa = 3.87 VHH943 pKa = 6.28 CTMNVTDD950 pKa = 5.98 DD951 pKa = 3.67 EE952 pKa = 5.18 DD953 pKa = 3.83 NPYY956 pKa = 9.73 TEE958 pKa = 5.72 DD959 pKa = 3.0 WDD961 pKa = 4.32 EE962 pKa = 4.32 NMSHH966 pKa = 5.1 QTPSIRR972 pKa = 11.84 CLSIVCGPEE981 pKa = 3.85 GVAAPVILPSHH992 pKa = 6.7 LKK994 pKa = 9.62 PWYY997 pKa = 9.73 QLAPDD1002 pKa = 4.36 SSPHH1006 pKa = 4.3 VTLAVGNGFEE1016 pKa = 4.31 ARR1018 pKa = 11.84 SLGPMIRR1025 pKa = 11.84 RR1026 pKa = 11.84 ASKK1029 pKa = 10.74 LDD1031 pKa = 3.38 WVPTATPGIMKK1042 pKa = 10.49 ASTEE1046 pKa = 4.07 QMWRR1050 pKa = 11.84 IVLVDD1055 pKa = 3.24 TTEE1058 pKa = 3.48 ICKK1061 pKa = 10.07 PEE1063 pKa = 4.47 RR1064 pKa = 11.84 LSLPRR1069 pKa = 11.84 HH1070 pKa = 5.64 HH1071 pKa = 7.15 GKK1073 pKa = 9.72 PYY1075 pKa = 10.1 SDD1077 pKa = 4.42 HH1078 pKa = 7.16 PSATALLDD1086 pKa = 4.57 SIDD1089 pKa = 3.7 EE1090 pKa = 5.19 AIWTTSPFDD1099 pKa = 3.59 VGRR1102 pKa = 11.84 LAVPPVRR1109 pKa = 11.84 VQLTHH1114 pKa = 6.4 QGQLPVYY1121 pKa = 9.28 RR1122 pKa = 11.84 SQYY1125 pKa = 8.11 RR1126 pKa = 11.84 LKK1128 pKa = 10.16 YY1129 pKa = 8.86 EE1130 pKa = 3.92 QIEE1133 pKa = 4.86 GIRR1136 pKa = 11.84 PTVEE1140 pKa = 3.74 GLLGADD1146 pKa = 4.63 CIYY1149 pKa = 10.39 ATSSPWNTPILPVPKK1164 pKa = 10.19 ADD1166 pKa = 2.91 GKK1168 pKa = 8.19 TYY1170 pKa = 11.12 RR1171 pKa = 11.84 MVQDD1175 pKa = 4.05 FRR1177 pKa = 11.84 AVNDD1181 pKa = 3.22 VTTGVDD1187 pKa = 3.86 LPVPDD1192 pKa = 4.15 PHH1194 pKa = 8.3 VSLSNLSPKK1203 pKa = 9.41 HH1204 pKa = 5.58 QYY1206 pKa = 8.3 FTVVDD1211 pKa = 4.19 LANAFFSIPLHH1222 pKa = 6.57 VDD1224 pKa = 3.27 SQPLFAFTYY1233 pKa = 10.64 DD1234 pKa = 3.46 NQQYY1238 pKa = 8.6 TYY1240 pKa = 10.9 SVLPQGYY1247 pKa = 8.41 RR1248 pKa = 11.84 CSPGIFNRR1256 pKa = 11.84 VLKK1259 pKa = 10.72 DD1260 pKa = 3.21 HH1261 pKa = 6.84 LKK1263 pKa = 10.73 EE1264 pKa = 3.8 IVIPDD1269 pKa = 3.8 GVVLIQYY1276 pKa = 10.34 VDD1278 pKa = 4.12 DD1279 pKa = 5.49 LLLAACSSDD1288 pKa = 3.14 QCLAATKK1295 pKa = 10.28 ILLDD1299 pKa = 3.78 FLATKK1304 pKa = 10.08 GYY1306 pKa = 9.01 KK1307 pKa = 9.28 VKK1309 pKa = 10.45 RR1310 pKa = 11.84 SKK1312 pKa = 10.96 VQTCRR1317 pKa = 11.84 RR1318 pKa = 11.84 TVLFLGRR1325 pKa = 11.84 EE1326 pKa = 4.17 VSAEE1330 pKa = 3.92 GAGLSTAHH1338 pKa = 6.8 RR1339 pKa = 11.84 NSILHH1344 pKa = 6.35 HH1345 pKa = 6.24 PRR1347 pKa = 11.84 PTTVSGLLSFLGLTGYY1363 pKa = 10.63 SRR1365 pKa = 11.84 THH1367 pKa = 6.72 IPDD1370 pKa = 3.3 YY1371 pKa = 9.78 TCRR1374 pKa = 11.84 TEE1376 pKa = 3.74 PLRR1379 pKa = 11.84 EE1380 pKa = 3.78 IVRR1383 pKa = 11.84 QAGARR1388 pKa = 11.84 NLHH1391 pKa = 6.83 ASLIWTPEE1399 pKa = 3.74 ATCAFGLLKK1408 pKa = 10.08 TDD1410 pKa = 4.39 LSVAAALAAPDD1421 pKa = 3.68 YY1422 pKa = 10.87 SKK1424 pKa = 10.86 PFHH1427 pKa = 7.03 LDD1429 pKa = 2.94 VSEE1432 pKa = 4.69 KK1433 pKa = 10.82 EE1434 pKa = 4.46 GFASAILFQKK1444 pKa = 10.53 QEE1446 pKa = 3.84 GEE1448 pKa = 4.08 RR1449 pKa = 11.84 RR1450 pKa = 11.84 VLMYY1454 pKa = 10.53 HH1455 pKa = 6.23 SSKK1458 pKa = 10.47 LDD1460 pKa = 4.01 HH1461 pKa = 7.05 IEE1463 pKa = 4.19 TGQTTCSRR1471 pKa = 11.84 YY1472 pKa = 8.94 VAAVAKK1478 pKa = 10.34 AIEE1481 pKa = 4.36 KK1482 pKa = 8.13 TAHH1485 pKa = 6.48 LVMCHH1490 pKa = 5.71 KK1491 pKa = 10.35 MEE1493 pKa = 3.85 IHH1495 pKa = 5.5 THH1497 pKa = 5.86 HH1498 pKa = 6.72 GVAAYY1503 pKa = 7.75 LTAKK1507 pKa = 10.03 EE1508 pKa = 4.39 FTFSADD1514 pKa = 3.43 RR1515 pKa = 11.84 KK1516 pKa = 10.61 NKK1518 pKa = 9.22 IQNKK1522 pKa = 7.1 CTQSHH1527 pKa = 4.57 ITFVNTDD1534 pKa = 3.11 KK1535 pKa = 11.69 NMADD1539 pKa = 3.95 ALNADD1544 pKa = 3.96 EE1545 pKa = 5.76 GSPHH1549 pKa = 5.31 VCAEE1553 pKa = 4.03 RR1554 pKa = 11.84 AAQEE1558 pKa = 4.12 LKK1560 pKa = 10.73 LRR1562 pKa = 11.84 PDD1564 pKa = 4.25 LGNDD1568 pKa = 3.88 PLPQADD1574 pKa = 3.45 LWLYY1578 pKa = 10.81 TDD1580 pKa = 4.37 GCCYY1584 pKa = 10.11 RR1585 pKa = 11.84 GKK1587 pKa = 10.34 DD1588 pKa = 3.71 GNIAAYY1594 pKa = 9.93 AVVQQDD1600 pKa = 3.55 SNGNHH1605 pKa = 5.38 STLEE1609 pKa = 4.13 SGVIPQPASAQLAEE1623 pKa = 4.82 IIGLTRR1629 pKa = 11.84 ALTLAEE1635 pKa = 4.24 GKK1637 pKa = 8.05 TVNIYY1642 pKa = 9.92 TDD1644 pKa = 2.8 SAYY1647 pKa = 10.79 AHH1649 pKa = 6.55 GAVHH1653 pKa = 7.11 IDD1655 pKa = 3.35 GPQWLRR1661 pKa = 11.84 RR1662 pKa = 11.84 NFTTTGNLPIKK1673 pKa = 10.13 HH1674 pKa = 5.3 KK1675 pKa = 9.26 TQMEE1679 pKa = 4.26 VLISAVALPKK1689 pKa = 10.17 KK1690 pKa = 9.47 VAIMKK1695 pKa = 10.3 CKK1697 pKa = 9.86 GHH1699 pKa = 5.69 QVLNSRR1705 pKa = 11.84 ISKK1708 pKa = 10.86 GNDD1711 pKa = 2.98 AADD1714 pKa = 3.6 QAAKK1718 pKa = 10.32 KK1719 pKa = 10.38 AGGYY1723 pKa = 9.93 SPGQMVLRR1731 pKa = 11.84 VDD1733 pKa = 3.83 PPSTEE1738 pKa = 3.82 LTVEE1742 pKa = 4.47 HH1743 pKa = 6.81 IKK1745 pKa = 10.45 EE1746 pKa = 4.19 LQQTAGPYY1754 pKa = 8.48 EE1755 pKa = 4.06 HH1756 pKa = 7.11 SVWKK1760 pKa = 10.48 QKK1762 pKa = 10.38 GASQGPEE1769 pKa = 4.17 GLWRR1773 pKa = 11.84 CHH1775 pKa = 6.87 DD1776 pKa = 3.61 GRR1778 pKa = 11.84 LVAPANLCPEE1788 pKa = 5.83 LIRR1791 pKa = 11.84 EE1792 pKa = 4.32 AHH1794 pKa = 6.08 GLTHH1798 pKa = 6.61 EE1799 pKa = 5.09 GKK1801 pKa = 10.66 LKK1803 pKa = 8.95 TLQRR1807 pKa = 11.84 VSYY1810 pKa = 7.73 TWWHH1814 pKa = 6.71 PYY1816 pKa = 7.95 MKK1818 pKa = 10.5 EE1819 pKa = 3.88 MTDD1822 pKa = 4.27 LFCDD1826 pKa = 3.06 NCTICGNYY1834 pKa = 9.4 NPKK1837 pKa = 10.21 KK1838 pKa = 10.12 PYY1840 pKa = 7.01 QTPMGHH1846 pKa = 5.6 YY1847 pKa = 7.86 PVPNACFQDD1856 pKa = 3.23 ISIDD1860 pKa = 3.9 YY1861 pKa = 9.48 TDD1863 pKa = 3.7 MGADD1867 pKa = 3.21 QVRR1870 pKa = 11.84 GGKK1873 pKa = 9.85 RR1874 pKa = 11.84 YY1875 pKa = 10.01 LLVMVDD1881 pKa = 4.17 RR1882 pKa = 11.84 FSRR1885 pKa = 11.84 WVEE1888 pKa = 4.19 AIPTAKK1894 pKa = 10.02 EE1895 pKa = 3.69 DD1896 pKa = 3.56 AKK1898 pKa = 11.34 SVIKK1902 pKa = 9.91 WLQTEE1907 pKa = 4.87 LIPRR1911 pKa = 11.84 YY1912 pKa = 9.24 GVPRR1916 pKa = 11.84 QIRR1919 pKa = 11.84 SDD1921 pKa = 3.67 NGSHH1925 pKa = 7.75 FSNQHH1930 pKa = 4.44 LRR1932 pKa = 11.84 QVEE1935 pKa = 4.06 EE1936 pKa = 4.05 RR1937 pKa = 11.84 FGIVHH1942 pKa = 6.92 KK1943 pKa = 10.49 FGSVYY1948 pKa = 10.4 KK1949 pKa = 9.38 PQSQGLVEE1957 pKa = 4.51 RR1958 pKa = 11.84 CNQTLKK1964 pKa = 11.27 AKK1966 pKa = 9.61 IAKK1969 pKa = 9.07 VCAGTKK1975 pKa = 8.05 LTWVEE1980 pKa = 4.12 ALPLALMAMRR1990 pKa = 11.84 SSPGAGTHH1998 pKa = 6.59 LSPHH2002 pKa = 7.0 EE2003 pKa = 4.17 IMTGRR2008 pKa = 11.84 VMPGPPRR2015 pKa = 11.84 EE2016 pKa = 4.38 GGHH2019 pKa = 5.59 MPALDD2024 pKa = 3.38 VHH2026 pKa = 6.56 QIGMTDD2032 pKa = 3.48 YY2033 pKa = 10.77 VRR2035 pKa = 11.84 KK2036 pKa = 8.76 LTEE2039 pKa = 3.75 LSAALSIQIQRR2050 pKa = 11.84 VAEE2053 pKa = 4.35 GEE2055 pKa = 4.13 LTDD2058 pKa = 5.67 DD2059 pKa = 3.64 QDD2061 pKa = 3.53 QPRR2064 pKa = 11.84 VKK2066 pKa = 10.49 VGDD2069 pKa = 3.42 WVRR2072 pKa = 11.84 IKK2074 pKa = 9.27 VHH2076 pKa = 5.11 KK2077 pKa = 10.31 RR2078 pKa = 11.84 KK2079 pKa = 9.03 WADD2082 pKa = 3.41 PRR2084 pKa = 11.84 WTGPYY2089 pKa = 8.76 EE2090 pKa = 4.19 VKK2092 pKa = 10.38 EE2093 pKa = 4.35 VTSHH2097 pKa = 5.56 SVQVKK2102 pKa = 9.64 GKK2104 pKa = 10.4 SGAPWHH2110 pKa = 6.65 HH2111 pKa = 6.55 LTHH2114 pKa = 6.63 CTPAPAPDD2122 pKa = 3.43 RR2123 pKa = 11.84 TLTEE2127 pKa = 3.9 VRR2129 pKa = 11.84 SDD2131 pKa = 4.54 LIASNLAINSEE2142 pKa = 4.39 SPDD2145 pKa = 3.4 NN2146 pKa = 3.85
Molecular weight: 238.25 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 7.119
IPC2_protein 7.497
IPC_protein 7.278
Toseland 7.073
ProMoST 7.907
Dawson 7.995
Bjellqvist 8.434
Wikipedia 7.907
Rodwell 8.024
Grimsley 7.19
Solomon 8.009
Lehninger 8.024
Nozaki 8.624
DTASelect 8.156
Thurlkill 8.2
EMBOSS 8.214
Sillero 8.521
Patrickios 4.304
IPC_peptide 8.009
IPC2_peptide 7.497
IPC2.peptide.svr19 7.408
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3
0
3
2858
25
2146
952.7
105.57
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.928 ± 1.268
2.449 ± 1.791
4.689 ± 0.15
4.899 ± 1.051
2.274 ± 0.542
7.068 ± 1.212
3.184 ± 0.449
3.989 ± 1.404
4.409 ± 0.942
9.097 ± 1.552
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.449 ± 1.008
3.744 ± 1.793
7.978 ± 1.371
5.073 ± 1.317
5.773 ± 1.182
7.418 ± 1.848
6.998 ± 0.227
6.543 ± 0.779
2.099 ± 0.788
2.904 ± 0.727
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here