Trichoplusia ni ascovirus 2c (TnAV-2c)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes; Pimascovirales; Ascoviridae; Ascovirus; unclassified Ascovirus

Average proteome isoelectric point is 6.71

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 161 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q06VR6|Q06VR6_TNAVC Uncharacterized protein OS=Trichoplusia ni ascovirus 2c OX=328615 PE=4 SV=1
MM1 pKa = 7.31YY2 pKa = 10.26FEE4 pKa = 5.15NINRR8 pKa = 11.84EE9 pKa = 3.97ITKK12 pKa = 8.83CTYY15 pKa = 10.35KK16 pKa = 10.87YY17 pKa = 10.81NEE19 pKa = 4.14SKK21 pKa = 9.65YY22 pKa = 9.31TLIAGNMNCVEE33 pKa = 4.35LNDD36 pKa = 3.8GGLYY40 pKa = 7.62VTPDD44 pKa = 3.41FKK46 pKa = 9.59TTKK49 pKa = 10.08NYY51 pKa = 10.42SDD53 pKa = 4.54KK54 pKa = 11.52SSDD57 pKa = 4.96DD58 pKa = 4.97DD59 pKa = 6.43DD60 pKa = 7.25DD61 pKa = 7.48DD62 pKa = 6.31DD63 pKa = 3.81MM64 pKa = 7.69

Molecular weight: 7.45 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q06VQ6|Q06VQ6_TNAVC Uncharacterized protein OS=Trichoplusia ni ascovirus 2c OX=328615 PE=4 SV=1
MM1 pKa = 7.57TSPLIPCTYY10 pKa = 8.56EE11 pKa = 3.52HH12 pKa = 7.04HH13 pKa = 6.71GSIILRR19 pKa = 11.84VMNKK23 pKa = 7.86LTRR26 pKa = 11.84TDD28 pKa = 3.28SVRR31 pKa = 11.84VSHH34 pKa = 5.81SCYY37 pKa = 10.03RR38 pKa = 11.84RR39 pKa = 11.84ILNRR43 pKa = 11.84TRR45 pKa = 11.84SSKK48 pKa = 10.27RR49 pKa = 11.84NIVVFYY55 pKa = 9.19IHH57 pKa = 7.04HH58 pKa = 6.59YY59 pKa = 9.28YY60 pKa = 10.36RR61 pKa = 5.56

Molecular weight: 7.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

161

0

161

49003

61

1481

304.4

34.89

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.155 ± 0.16

2.494 ± 0.13

6.61 ± 0.156

5.271 ± 0.202

3.622 ± 0.11

4.159 ± 0.139

2.328 ± 0.085

7.916 ± 0.17

6.859 ± 0.156

8.222 ± 0.199

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.908 ± 0.086

7.622 ± 0.204

3.567 ± 0.139

2.965 ± 0.12

5.279 ± 0.242

8.253 ± 0.272

6.171 ± 0.136

6.114 ± 0.152

0.916 ± 0.061

4.569 ± 0.158
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski