Citrobacter phage Moon

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Tevenvirinae; Moonvirus; Citrobacter virus Moon

Average proteome isoelectric point is 6.11

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 298 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A0YP50|A0A0A0YP50_9CAUD Uncharacterized protein OS=Citrobacter phage Moon OX=1540095 GN=CPT_Moon93 PE=4 SV=1
MM1 pKa = 7.49TKK3 pKa = 9.64TEE5 pKa = 4.43IVDD8 pKa = 3.78DD9 pKa = 4.33LQLAGYY15 pKa = 7.33FACVKK20 pKa = 10.42DD21 pKa = 3.59DD22 pKa = 4.65RR23 pKa = 11.84IWIEE27 pKa = 3.89GTSEE31 pKa = 4.13YY32 pKa = 10.92GVDD35 pKa = 3.17WVIEE39 pKa = 4.03EE40 pKa = 5.81DD41 pKa = 4.37FDD43 pKa = 4.48AWWLYY48 pKa = 10.78EE49 pKa = 4.05FTGKK53 pKa = 10.28DD54 pKa = 3.94YY55 pKa = 11.66YY56 pKa = 11.51SVDD59 pKa = 2.99AFGNMDD65 pKa = 4.33DD66 pKa = 5.1ALNGANKK73 pKa = 10.21LL74 pKa = 3.8

Molecular weight: 8.57 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A0YTH8|A0A0A0YTH8_9CAUD Uncharacterized protein OS=Citrobacter phage Moon OX=1540095 GN=CPT_Moon107 PE=4 SV=1
MM1 pKa = 7.75TITTRR6 pKa = 11.84ITVTKK11 pKa = 9.76EE12 pKa = 2.84ISLYY16 pKa = 9.46ISYY19 pKa = 10.64GRR21 pKa = 11.84IHH23 pKa = 7.17PRR25 pKa = 11.84TARR28 pKa = 11.84RR29 pKa = 11.84WYY31 pKa = 10.43LEE33 pKa = 3.84AVCRR37 pKa = 11.84EE38 pKa = 3.67TGRR41 pKa = 11.84RR42 pKa = 11.84VNAKK46 pKa = 9.68FVVRR50 pKa = 11.84PTKK53 pKa = 10.14KK54 pKa = 9.98QIRR57 pKa = 11.84KK58 pKa = 7.45FKK60 pKa = 9.25RR61 pKa = 11.84WAIEE65 pKa = 3.58RR66 pKa = 11.84LRR68 pKa = 11.84FSLYY72 pKa = 9.2WDD74 pKa = 4.55EE75 pKa = 4.28II76 pKa = 4.08

Molecular weight: 9.36 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

298

0

298

54073

33

1265

181.5

20.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.709 ± 0.157

1.097 ± 0.077

6.521 ± 0.103

7.285 ± 0.161

4.409 ± 0.106

6.145 ± 0.151

1.909 ± 0.099

7.151 ± 0.128

7.503 ± 0.185

7.471 ± 0.125

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.996 ± 0.078

5.372 ± 0.101

3.449 ± 0.088

3.427 ± 0.094

4.594 ± 0.105

6.21 ± 0.141

5.644 ± 0.195

6.475 ± 0.124

1.476 ± 0.06

4.157 ± 0.124
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski