Caulobacter phage Kronos

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 6.91

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 58 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A386KQ00|A0A386KQ00_9CAUD Uncharacterized protein OS=Caulobacter phage Kronos OX=2340873 PE=4 SV=1
MM1 pKa = 7.6AKK3 pKa = 10.01KK4 pKa = 9.44EE5 pKa = 4.14AQTQTVTIGGTVYY18 pKa = 10.41PVRR21 pKa = 11.84FDD23 pKa = 3.69YY24 pKa = 11.34GSLIAFCDD32 pKa = 3.78EE33 pKa = 3.86VGATIDD39 pKa = 3.52TMQQALAALPLNRR52 pKa = 11.84MSLVVWAGIVDD63 pKa = 3.79WTYY66 pKa = 10.41EE67 pKa = 3.95TDD69 pKa = 3.84DD70 pKa = 5.39DD71 pKa = 4.3EE72 pKa = 5.0TGTPSMTPARR82 pKa = 11.84VSRR85 pKa = 11.84LLKK88 pKa = 10.97GEE90 pKa = 4.37TIEE93 pKa = 4.72DD94 pKa = 3.52AQAILAKK101 pKa = 10.59CLDD104 pKa = 3.8AFTASMAPKK113 pKa = 9.66RR114 pKa = 11.84KK115 pKa = 9.45EE116 pKa = 3.59PAEE119 pKa = 4.43GDD121 pKa = 3.84TASPPATPAMTSPGSTDD138 pKa = 2.74SS139 pKa = 3.53

Molecular weight: 14.75 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A386KT89|A0A386KT89_9CAUD Uncharacterized protein OS=Caulobacter phage Kronos OX=2340873 PE=4 SV=1
MM1 pKa = 7.62PGWNGTCKK9 pKa = 10.34RR10 pKa = 11.84YY11 pKa = 10.1LFQVGTKK18 pKa = 10.19CAGLPEE24 pKa = 4.79AFQSGTKK31 pKa = 10.82ANMEE35 pKa = 4.19QKK37 pKa = 10.82APAQPPRR44 pKa = 11.84RR45 pKa = 11.84HH46 pKa = 6.09LSLIVKK52 pKa = 10.34DD53 pKa = 4.1EE54 pKa = 4.27TQTPAARR61 pKa = 11.84FAACLEE67 pKa = 4.51AYY69 pKa = 10.58SLTDD73 pKa = 3.73DD74 pKa = 4.07EE75 pKa = 5.21AAALLGVSRR84 pKa = 11.84PVVARR89 pKa = 11.84LRR91 pKa = 11.84LARR94 pKa = 11.84RR95 pKa = 11.84PASQDD100 pKa = 2.35IAARR104 pKa = 11.84AEE106 pKa = 4.04LLFGIPAAHH115 pKa = 7.23WALLPDD121 pKa = 3.58EE122 pKa = 4.34TVARR126 pKa = 11.84IKK128 pKa = 10.88ANRR131 pKa = 11.84SALEE135 pKa = 3.56RR136 pKa = 11.84TARR139 pKa = 11.84QRR141 pKa = 11.84PTRR144 pKa = 11.84KK145 pKa = 9.49AAA147 pKa = 3.45

Molecular weight: 16.03 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

58

0

58

13475

51

1339

232.3

24.96

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.308 ± 0.556

0.994 ± 0.161

5.447 ± 0.17

5.521 ± 0.407

3.221 ± 0.147

8.757 ± 0.402

1.922 ± 0.216

3.391 ± 0.242

4.215 ± 0.402

8.364 ± 0.312

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.709 ± 0.218

2.894 ± 0.214

5.981 ± 0.363

3.555 ± 0.14

6.516 ± 0.485

4.757 ± 0.238

6.412 ± 0.415

7.391 ± 0.37

1.707 ± 0.117

1.937 ± 0.23
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski