Bombyx mori densovirus Zhenjiang

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Mouviricetes; Polivirales; Bidnaviridae; Bidensovirus; Bombyx mori bidensovirus

Average proteome isoelectric point is 6.11

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B2ZA91|B2ZA91_9VIRU Nonstructural protein OS=Bombyx mori densovirus Zhenjiang OX=530042 PE=4 SV=1
MM1 pKa = 7.68LRR3 pKa = 11.84LTDD6 pKa = 3.46LHH8 pKa = 7.07KK9 pKa = 10.59PSCEE13 pKa = 3.81PKK15 pKa = 10.08GLSFYY20 pKa = 10.52AYY22 pKa = 9.68KK23 pKa = 10.92AFIPYY28 pKa = 9.49RR29 pKa = 11.84EE30 pKa = 4.2KK31 pKa = 11.0LSKK34 pKa = 9.85EE35 pKa = 3.93WNKK38 pKa = 10.6LPVCIKK44 pKa = 10.47DD45 pKa = 3.33QEE47 pKa = 4.08VDD49 pKa = 2.71IKK51 pKa = 11.27QEE53 pKa = 3.96VKK55 pKa = 10.36EE56 pKa = 4.15DD57 pKa = 3.26QLIRR61 pKa = 11.84KK62 pKa = 8.42IYY64 pKa = 9.82KK65 pKa = 7.97WDD67 pKa = 3.57SVFDD71 pKa = 3.34SWNWSKK77 pKa = 11.09GYY79 pKa = 10.4KK80 pKa = 9.44LPKK83 pKa = 9.34PLYY86 pKa = 8.65EE87 pKa = 4.17LLEE90 pKa = 5.14IYY92 pKa = 9.31MKK94 pKa = 10.49LWKK97 pKa = 10.02LDD99 pKa = 3.26NRR101 pKa = 11.84TTYY104 pKa = 10.33PDD106 pKa = 3.06WGEE109 pKa = 3.52SSMIFKK115 pKa = 10.3CYY117 pKa = 10.02RR118 pKa = 11.84YY119 pKa = 9.71IRR121 pKa = 11.84NKK123 pKa = 10.29RR124 pKa = 11.84MEE126 pKa = 5.19DD127 pKa = 3.11IEE129 pKa = 4.24NLSTEE134 pKa = 4.36EE135 pKa = 4.17FNDD138 pKa = 3.75SNFNGWPKK146 pKa = 9.85TMWYY150 pKa = 9.25ICRR153 pKa = 11.84NCFDD157 pKa = 3.74NGIVINNNSNDD168 pKa = 3.38YY169 pKa = 11.15YY170 pKa = 8.68YY171 pKa = 10.78TCDD174 pKa = 3.9FSDD177 pKa = 3.81NPTLLHH183 pKa = 5.17YY184 pKa = 9.59TDD186 pKa = 3.71YY187 pKa = 10.99FYY189 pKa = 11.47YY190 pKa = 10.21ILNNDD195 pKa = 3.66YY196 pKa = 9.93WCYY199 pKa = 9.85DD200 pKa = 3.53CKK202 pKa = 10.4YY203 pKa = 8.8TPLFTLTTLFCLEE216 pKa = 4.88SINDD220 pKa = 3.74SEE222 pKa = 4.42

Molecular weight: 27.14 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B2ZA88|B2ZA88_9VIRU Nonstructural protein OS=Bombyx mori densovirus Zhenjiang OX=530042 PE=4 SV=1
MM1 pKa = 7.46EE2 pKa = 5.22SKK4 pKa = 11.13SNFRR8 pKa = 11.84ILSNEE13 pKa = 4.18IISKK17 pKa = 9.68PSSLISNISSPSTSLIPRR35 pKa = 11.84SLQKK39 pKa = 9.98SAKK42 pKa = 9.2RR43 pKa = 11.84LTISSLEE50 pKa = 4.18SGNGKK55 pKa = 7.88QQMKK59 pKa = 10.59SKK61 pKa = 10.17LAQVQRR67 pKa = 11.84ALRR70 pKa = 11.84FCRR73 pKa = 11.84DD74 pKa = 3.45YY75 pKa = 11.6NIVKK79 pKa = 9.91YY80 pKa = 9.12YY81 pKa = 10.43QFMDD85 pKa = 3.96IPPEE89 pKa = 3.9EE90 pKa = 3.99YY91 pKa = 10.06RR92 pKa = 11.84EE93 pKa = 4.09LRR95 pKa = 11.84THH97 pKa = 6.91CSKK100 pKa = 11.15DD101 pKa = 3.61VLEE104 pKa = 4.48TAADD108 pKa = 3.38INYY111 pKa = 9.33QEE113 pKa = 4.37YY114 pKa = 10.55YY115 pKa = 10.04YY116 pKa = 10.98EE117 pKa = 4.15EE118 pKa = 4.36VNNRR122 pKa = 11.84LQVFLSYY129 pKa = 11.65GDD131 pKa = 4.1GSWGEE136 pKa = 4.08EE137 pKa = 3.85EE138 pKa = 4.68EE139 pKa = 4.48EE140 pKa = 3.62IVMLFKK146 pKa = 11.02HH147 pKa = 5.96NNVDD151 pKa = 2.84ISKK154 pKa = 9.91FCEE157 pKa = 3.51ALYY160 pKa = 10.81SIFTMSDD167 pKa = 2.96YY168 pKa = 11.07RR169 pKa = 11.84KK170 pKa = 10.24NCIFLNGNIKK180 pKa = 9.09TGKK183 pKa = 7.22TLMMRR188 pKa = 11.84LITGNFKK195 pKa = 10.87CVGKK199 pKa = 10.72GCNNGVNSEE208 pKa = 4.29FYY210 pKa = 8.22YY211 pKa = 10.72QKK213 pKa = 10.81FIGRR217 pKa = 11.84SICVLEE223 pKa = 4.66EE224 pKa = 4.26PFLDD228 pKa = 4.18PQTLEE233 pKa = 3.98DD234 pKa = 4.2FKK236 pKa = 11.43SIFGGEE242 pKa = 4.25GFDD245 pKa = 4.68ISCKK249 pKa = 9.13FHH251 pKa = 7.23NPQTLNRR258 pKa = 11.84TPFIITSNFSLLSRR272 pKa = 11.84GHH274 pKa = 6.59APSISEE280 pKa = 3.89MAIKK284 pKa = 10.53DD285 pKa = 3.24RR286 pKa = 11.84FYY288 pKa = 10.79IFNFNNSYY296 pKa = 9.09TPKK299 pKa = 10.55CKK301 pKa = 10.33LSPKK305 pKa = 10.21NFVNVYY311 pKa = 9.23NKK313 pKa = 10.75YY314 pKa = 10.39YY315 pKa = 10.78GG316 pKa = 3.37

Molecular weight: 36.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

3438

126

1160

573.0

65.65

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.363 ± 0.566

1.687 ± 0.334

6.137 ± 0.65

5.526 ± 0.455

5.061 ± 0.45

5.177 ± 0.985

1.483 ± 0.373

8.581 ± 0.629

6.457 ± 1.241

8.377 ± 0.617

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.571 ± 0.23

8.173 ± 0.643

4.101 ± 0.247

3.229 ± 0.723

4.654 ± 0.776

7.533 ± 0.916

6.457 ± 0.499

4.945 ± 0.341

1.105 ± 0.306

5.381 ± 0.591
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski