Penicillium flavigenum

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae;

Average proteome isoelectric point is 6.33

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10875 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1V6TPE9|A0A1V6TPE9_9EURO Uncharacterized protein OS=Penicillium flavigenum OX=254877 GN=PENFLA_c005G04698 PE=4 SV=1
MM1 pKa = 7.72RR2 pKa = 11.84TQQLLPICGLLLASVAIASKK22 pKa = 10.51LDD24 pKa = 3.58HH25 pKa = 7.67DD26 pKa = 5.13DD27 pKa = 3.58VPSRR31 pKa = 11.84CWPACGPVVGIANSCDD47 pKa = 3.12ARR49 pKa = 11.84HH50 pKa = 5.93EE51 pKa = 4.22RR52 pKa = 11.84DD53 pKa = 3.38SAEE56 pKa = 4.0IQCICDD62 pKa = 2.94WDD64 pKa = 3.85AAKK67 pKa = 8.95TQIPLCAACITQYY80 pKa = 9.22QTDD83 pKa = 3.77RR84 pKa = 11.84RR85 pKa = 11.84NHH87 pKa = 5.34NTTHH91 pKa = 7.06HH92 pKa = 6.84DD93 pKa = 3.6HH94 pKa = 7.89DD95 pKa = 6.29DD96 pKa = 3.95NDD98 pKa = 5.61DD99 pKa = 4.47DD100 pKa = 6.95DD101 pKa = 6.58DD102 pKa = 4.95DD103 pKa = 6.13HH104 pKa = 9.59DD105 pKa = 5.0YY106 pKa = 11.92DD107 pKa = 4.69NDD109 pKa = 3.57NDD111 pKa = 4.15NDD113 pKa = 3.96IDD115 pKa = 5.47DD116 pKa = 5.56DD117 pKa = 4.89DD118 pKa = 6.11NEE120 pKa = 4.39ALDD123 pKa = 4.42LVRR126 pKa = 11.84SCKK129 pKa = 9.64LTTTTYY135 pKa = 10.94NSAAATTVSTSTSTAGANTATTTDD159 pKa = 3.19SSNAATGTDD168 pKa = 3.29SAGAGGTNSQDD179 pKa = 3.2STGAAGASAGSASSPTPTPDD199 pKa = 2.9AAAGILAPGAASMAGVMGLVALAWLL224 pKa = 4.2

Molecular weight: 23.0 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1V6S7P2|A0A1V6S7P2_9EURO Uncharacterized protein (Fragment) OS=Penicillium flavigenum OX=254877 GN=PENFLA_c097G10561 PE=4 SV=1
MM1 pKa = 7.5SLRR4 pKa = 11.84RR5 pKa = 11.84LLVSQMTLRR14 pKa = 11.84RR15 pKa = 11.84LLVSQLSLRR24 pKa = 11.84RR25 pKa = 11.84LLVSQMSLRR34 pKa = 11.84RR35 pKa = 11.84LLLSQMSLRR44 pKa = 11.84RR45 pKa = 11.84LLLSQMSLRR54 pKa = 11.84RR55 pKa = 11.84LLLSQMSLRR64 pKa = 11.84RR65 pKa = 11.84LLVSQMSLRR74 pKa = 11.84RR75 pKa = 11.84LLLSQMSLRR84 pKa = 11.84RR85 pKa = 11.84LLVSQLSLRR94 pKa = 11.84RR95 pKa = 11.84LLLTQRR101 pKa = 11.84SPAGLTCHH109 pKa = 6.58HH110 pKa = 6.59SVPLRR115 pKa = 11.84SSLGG119 pKa = 3.46

Molecular weight: 13.88 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10875

0

10875

5176197

10

6336

476.0

52.72

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.423 ± 0.019

1.269 ± 0.009

5.669 ± 0.017

6.12 ± 0.024

3.801 ± 0.015

6.779 ± 0.022

2.441 ± 0.01

5.074 ± 0.017

4.62 ± 0.019

8.971 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.259 ± 0.008

3.738 ± 0.012

6.048 ± 0.027

4.072 ± 0.017

5.966 ± 0.022

8.332 ± 0.026

5.969 ± 0.017

6.157 ± 0.017

1.495 ± 0.01

2.798 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski