Pacific flying fox faeces associated gemycircularvirus-7

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemykolovirus; Gemykolovirus ptero2; Pteropus associated gemykolovirus 2

Average proteome isoelectric point is 6.55

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A140CTN4|A0A140CTN4_9VIRU RepA OS=Pacific flying fox faeces associated gemycircularvirus-7 OX=1795999 PE=4 SV=1
MM1 pKa = 6.83PAKK4 pKa = 10.46YY5 pKa = 10.31KK6 pKa = 10.68LDD8 pKa = 3.58NEE10 pKa = 4.36QFFMVTFVRR19 pKa = 11.84TPDD22 pKa = 3.35DD23 pKa = 3.64WPVCDD28 pKa = 6.22LITILDD34 pKa = 4.05RR35 pKa = 11.84LGCDD39 pKa = 3.17YY40 pKa = 11.01RR41 pKa = 11.84VGRR44 pKa = 11.84EE45 pKa = 3.6LHH47 pKa = 6.89ADD49 pKa = 4.2GKK51 pKa = 8.6PHH53 pKa = 5.13YY54 pKa = 10.11HH55 pKa = 6.52AMCVFDD61 pKa = 5.42EE62 pKa = 5.39PYY64 pKa = 10.89SDD66 pKa = 3.19TDD68 pKa = 3.13ARR70 pKa = 11.84KK71 pKa = 7.12TFQVAGRR78 pKa = 11.84SPNIRR83 pKa = 11.84VRR85 pKa = 11.84RR86 pKa = 11.84SRR88 pKa = 11.84PDD90 pKa = 3.07RR91 pKa = 11.84GWNYY95 pKa = 9.65VGKK98 pKa = 9.54HH99 pKa = 5.51AGTKK103 pKa = 9.22EE104 pKa = 3.67GHH106 pKa = 6.51EE107 pKa = 4.16IVAEE111 pKa = 4.1RR112 pKa = 11.84GEE114 pKa = 4.42CPMGDD119 pKa = 3.56EE120 pKa = 4.82EE121 pKa = 5.72DD122 pKa = 4.24RR123 pKa = 11.84PSNDD127 pKa = 2.35VWHH130 pKa = 6.84EE131 pKa = 3.99IILARR136 pKa = 11.84TRR138 pKa = 11.84EE139 pKa = 4.03EE140 pKa = 4.11FFEE143 pKa = 4.59KK144 pKa = 10.13CATMAPRR151 pKa = 11.84QLACCFGQLSSYY163 pKa = 11.23ADD165 pKa = 3.14WKK167 pKa = 8.81YY168 pKa = 11.32AKK170 pKa = 9.45PKK172 pKa = 9.86EE173 pKa = 4.47VYY175 pKa = 9.02EE176 pKa = 4.24PPVGEE181 pKa = 3.86FLEE184 pKa = 4.6IPEE187 pKa = 4.84EE188 pKa = 3.91LTSWVEE194 pKa = 4.26RR195 pKa = 11.84NLTNPNGRR203 pKa = 11.84YY204 pKa = 9.31VCII207 pKa = 4.32

Molecular weight: 24.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A140CTN3|A0A140CTN3_9VIRU Replication-associated protein OS=Pacific flying fox faeces associated gemycircularvirus-7 OX=1795999 PE=4 SV=1
MM1 pKa = 7.91PYY3 pKa = 10.48GRR5 pKa = 11.84YY6 pKa = 9.09RR7 pKa = 11.84RR8 pKa = 11.84SSYY11 pKa = 10.18RR12 pKa = 11.84RR13 pKa = 11.84YY14 pKa = 10.12GRR16 pKa = 11.84SRR18 pKa = 11.84YY19 pKa = 9.71APRR22 pKa = 11.84SYY24 pKa = 10.88VRR26 pKa = 11.84RR27 pKa = 11.84PYY29 pKa = 10.54YY30 pKa = 9.73GVRR33 pKa = 11.84RR34 pKa = 11.84PFYY37 pKa = 9.15SRR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84YY42 pKa = 9.87RR43 pKa = 11.84PVSRR47 pKa = 11.84SILNVSSVKK56 pKa = 10.75KK57 pKa = 9.57KK58 pKa = 11.17DD59 pKa = 3.37NMLAVTNVLGTARR72 pKa = 11.84PSVQPFQDD80 pKa = 3.56GAASLVGSTAGRR92 pKa = 11.84GSPYY96 pKa = 10.45VFIWNATARR105 pKa = 11.84DD106 pKa = 4.0HH107 pKa = 7.23EE108 pKa = 5.05DD109 pKa = 3.84DD110 pKa = 3.52STKK113 pKa = 10.41YY114 pKa = 10.76DD115 pKa = 3.37EE116 pKa = 4.61AARR119 pKa = 11.84TSSAPYY125 pKa = 9.39MVGLKK130 pKa = 10.06EE131 pKa = 4.46RR132 pKa = 11.84ILVQTSDD139 pKa = 3.41ANPWQWRR146 pKa = 11.84RR147 pKa = 11.84ICFTAKK153 pKa = 10.22GLNSSFLTAGAGANEE168 pKa = 4.09NNPFYY173 pKa = 10.72EE174 pKa = 4.8DD175 pKa = 3.0STGFRR180 pKa = 11.84RR181 pKa = 11.84EE182 pKa = 3.73VAEE185 pKa = 4.62PGSAGLTNIRR195 pKa = 11.84NIIFDD200 pKa = 3.8GAYY203 pKa = 10.33GIDD206 pKa = 3.48WNDD209 pKa = 3.35PFSAKK214 pKa = 9.49TDD216 pKa = 3.34NQRR219 pKa = 11.84IKK221 pKa = 10.85VRR223 pKa = 11.84YY224 pKa = 9.2DD225 pKa = 2.88KK226 pKa = 11.24TRR228 pKa = 11.84MIRR231 pKa = 11.84STNNVGVIRR240 pKa = 11.84YY241 pKa = 9.1YY242 pKa = 11.65NMWHH246 pKa = 6.59PMKK249 pKa = 9.8KK250 pKa = 8.15TLMYY254 pKa = 10.94NDD256 pKa = 4.95DD257 pKa = 3.99EE258 pKa = 5.71NGASMDD264 pKa = 3.67SAYY267 pKa = 10.05VAQMGDD273 pKa = 3.36MGMGDD278 pKa = 4.13YY279 pKa = 10.6FVLDD283 pKa = 4.97FIRR286 pKa = 11.84CIDD289 pKa = 4.16APSGTPGLIFQPEE302 pKa = 3.88ATLYY306 pKa = 7.84WHH308 pKa = 6.69EE309 pKa = 4.18RR310 pKa = 3.47

Molecular weight: 35.44 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

848

207

331

282.7

32.7

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.722 ± 0.628

2.241 ± 0.837

7.075 ± 0.293

6.722 ± 1.736

4.245 ± 0.176

7.075 ± 0.373

2.358 ± 0.649

4.245 ± 0.165

5.071 ± 0.786

5.307 ± 0.548

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.066 ± 0.287

4.127 ± 0.784

6.25 ± 0.447

2.123 ± 0.082

8.844 ± 1.03

5.542 ± 1.385

5.307 ± 0.178

5.66 ± 0.46

2.83 ± 0.517

5.189 ± 0.891
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski