Alces alces faeces associated genomovirus MP43

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemycircularvirus; Gemycircularvirus lepam2

Average proteome isoelectric point is 7.19

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z5CJA2|A0A2Z5CJA2_9VIRU Replication associated protein OS=Alces alces faeces associated genomovirus MP43 OX=2219114 PE=3 SV=1
MM1 pKa = 7.73PFVCNARR8 pKa = 11.84YY9 pKa = 8.93FLVTYY14 pKa = 8.73GHH16 pKa = 7.09VDD18 pKa = 3.09TLDD21 pKa = 3.61PFTIVDD27 pKa = 3.97FFGQLGAEE35 pKa = 4.26VIVGRR40 pKa = 11.84EE41 pKa = 4.0QYY43 pKa = 10.42HH44 pKa = 5.65ATLGTHH50 pKa = 5.68FHH52 pKa = 6.13VFADD56 pKa = 4.66FGRR59 pKa = 11.84KK60 pKa = 8.2FRR62 pKa = 11.84SRR64 pKa = 11.84RR65 pKa = 11.84ADD67 pKa = 3.0IFDD70 pKa = 3.27VDD72 pKa = 4.66GYY74 pKa = 10.67HH75 pKa = 7.1PNISPSRR82 pKa = 11.84GTPEE86 pKa = 3.98AGYY89 pKa = 10.62DD90 pKa = 3.63YY91 pKa = 10.68AIKK94 pKa = 10.92DD95 pKa = 3.59GDD97 pKa = 4.02VVAGGLARR105 pKa = 11.84PSGVGPSGRR114 pKa = 11.84AAKK117 pKa = 8.64WHH119 pKa = 6.38SIIDD123 pKa = 3.51AEE125 pKa = 4.51TRR127 pKa = 11.84DD128 pKa = 3.84EE129 pKa = 5.15FYY131 pKa = 11.19SLCEE135 pKa = 3.81EE136 pKa = 4.97LDD138 pKa = 3.65PEE140 pKa = 4.71RR141 pKa = 11.84LVCSFGQIQKK151 pKa = 9.8YY152 pKa = 10.1ADD154 pKa = 2.61WRR156 pKa = 11.84YY157 pKa = 9.15RR158 pKa = 11.84VEE160 pKa = 4.19PEE162 pKa = 4.6PYY164 pKa = 9.96ASPNGVFNLAEE175 pKa = 4.28YY176 pKa = 11.2GDD178 pKa = 4.16LSEE181 pKa = 4.74SKK183 pKa = 10.8SLILWGPSRR192 pKa = 11.84MGKK195 pKa = 6.86TVWARR200 pKa = 11.84SLGNHH205 pKa = 7.1LYY207 pKa = 10.71FGGIFSARR215 pKa = 11.84DD216 pKa = 3.28INRR219 pKa = 11.84DD220 pKa = 3.08GVEE223 pKa = 3.73YY224 pKa = 10.66AIFDD228 pKa = 5.13DD229 pKa = 3.53IAGGIKK235 pKa = 10.03FFPRR239 pKa = 11.84FKK241 pKa = 10.79DD242 pKa = 3.12WLGCQMEE249 pKa = 4.36FMVKK253 pKa = 9.32EE254 pKa = 4.5MYY256 pKa = 10.15RR257 pKa = 11.84DD258 pKa = 3.31PHH260 pKa = 6.37LFRR263 pKa = 11.84WGRR266 pKa = 11.84PAIWIANTDD275 pKa = 3.42PRR277 pKa = 11.84HH278 pKa = 6.13DD279 pKa = 3.82MSHH282 pKa = 6.98EE283 pKa = 4.0DD284 pKa = 3.94VTWLEE289 pKa = 4.04ANCIFVEE296 pKa = 3.75IDD298 pKa = 3.19SAIFHH303 pKa = 7.06ANTEE307 pKa = 4.17

Molecular weight: 34.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2Z5CJA2|A0A2Z5CJA2_9VIRU Replication associated protein OS=Alces alces faeces associated genomovirus MP43 OX=2219114 PE=3 SV=1
MM1 pKa = 7.39ARR3 pKa = 11.84SRR5 pKa = 11.84YY6 pKa = 9.0YY7 pKa = 10.96GGGKK11 pKa = 7.6STGWANSKK19 pKa = 9.07RR20 pKa = 11.84RR21 pKa = 11.84KK22 pKa = 9.34YY23 pKa = 9.75RR24 pKa = 11.84SKK26 pKa = 10.61PRR28 pKa = 11.84RR29 pKa = 11.84SYY31 pKa = 10.85AKK33 pKa = 8.96KK34 pKa = 10.15RR35 pKa = 11.84SIFRR39 pKa = 11.84SKK41 pKa = 10.79RR42 pKa = 11.84MSTRR46 pKa = 11.84KK47 pKa = 9.41ILNITATKK55 pKa = 10.5KK56 pKa = 10.13RR57 pKa = 11.84DD58 pKa = 3.25TMMAWTNSSPSSQFGGATYY77 pKa = 10.09TNNAAVINGSAPDD90 pKa = 3.4STAQVFLWNATARR103 pKa = 11.84DD104 pKa = 3.62NSTSYY109 pKa = 11.02SAANPPTGSIFNTSTRR125 pKa = 11.84TSSNPYY131 pKa = 8.66MVGLAEE137 pKa = 5.19SIEE140 pKa = 4.26IQCNTGMPWQWRR152 pKa = 11.84RR153 pKa = 11.84ICFTMKK159 pKa = 10.4GPSLVPTSTASGAVFSTSAEE179 pKa = 4.14SSNGWLRR186 pKa = 11.84MMNQVGGNPGQNPMYY201 pKa = 10.65NLMVPLFRR209 pKa = 11.84GQVGADD215 pKa = 3.26WIDD218 pKa = 3.69PMTAATDD225 pKa = 3.59NSRR228 pKa = 11.84VTIKK232 pKa = 10.5YY233 pKa = 9.78DD234 pKa = 3.23KK235 pKa = 10.62TITLSSGNEE244 pKa = 3.75DD245 pKa = 3.51GFIRR249 pKa = 11.84TYY251 pKa = 10.94KK252 pKa = 9.53RR253 pKa = 11.84WHH255 pKa = 6.23PMKK258 pKa = 10.21STLVYY263 pKa = 10.9DD264 pKa = 4.67DD265 pKa = 5.5DD266 pKa = 4.23EE267 pKa = 5.18QGGSKK272 pKa = 8.76TVNIQSVSGKK282 pKa = 10.59AGMGDD287 pKa = 4.29YY288 pKa = 11.18YY289 pKa = 11.5VMDD292 pKa = 4.15MFRR295 pKa = 11.84ARR297 pKa = 11.84QGSAVADD304 pKa = 3.71QLTVRR309 pKa = 11.84PTATLYY315 pKa = 9.45WHH317 pKa = 7.01EE318 pKa = 4.29KK319 pKa = 9.3

Molecular weight: 35.36 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

626

307

319

313.0

35.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.987 ± 0.114

1.118 ± 0.343

6.23 ± 1.284

3.994 ± 1.474

5.112 ± 1.598

8.626 ± 0.332

2.077 ± 1.011

5.112 ± 0.723

4.313 ± 0.927

4.473 ± 0.715

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.514 ± 1.047

4.633 ± 1.142

4.952 ± 0.174

2.556 ± 0.622

7.348 ± 0.122

8.626 ± 2.073

6.709 ± 2.099

5.431 ± 0.509

2.716 ± 0.074

4.473 ± 0.059
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski