Odonata-associated circular virus-9

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 8.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4UI03|A0A0B4UI03_9VIRU Putative capsid protein OS=Odonata-associated circular virus-9 OX=1592129 PE=4 SV=1
MM1 pKa = 7.45IFKK4 pKa = 10.58KK5 pKa = 10.38KK6 pKa = 10.05IYY8 pKa = 9.89FSNKK12 pKa = 7.93IKK14 pKa = 10.17MSSRR18 pKa = 11.84NYY20 pKa = 10.38VLTIYY25 pKa = 10.64DD26 pKa = 3.84FNLLPKK32 pKa = 10.1LQDD35 pKa = 3.15SAIRR39 pKa = 11.84YY40 pKa = 7.69SAYY43 pKa = 9.47TDD45 pKa = 4.3EE46 pKa = 4.82ICPTTGRR53 pKa = 11.84PHH55 pKa = 5.34KK56 pKa = 9.79QAYY59 pKa = 7.93IVLYY63 pKa = 10.0KK64 pKa = 10.06KK65 pKa = 10.18QRR67 pKa = 11.84PSFVRR72 pKa = 11.84KK73 pKa = 10.04LFPNTYY79 pKa = 7.99NHH81 pKa = 6.38IMNGTLEE88 pKa = 4.02QNDD91 pKa = 3.49IYY93 pKa = 10.67ISKK96 pKa = 10.76KK97 pKa = 7.94NTQQIHH103 pKa = 6.18EE104 pKa = 4.53YY105 pKa = 9.69GDD107 pKa = 3.34KK108 pKa = 11.1PMTQEE113 pKa = 3.82EE114 pKa = 4.46KK115 pKa = 10.91GEE117 pKa = 3.88EE118 pKa = 4.09GAAYY122 pKa = 9.0WRR124 pKa = 11.84EE125 pKa = 3.83QLEE128 pKa = 4.25LAKK131 pKa = 10.04KK132 pKa = 10.41DD133 pKa = 4.09PSLCDD138 pKa = 3.35PKK140 pKa = 11.02LQIIHH145 pKa = 6.39HH146 pKa = 6.67RR147 pKa = 11.84NLEE150 pKa = 4.48AIHH153 pKa = 6.31EE154 pKa = 4.2KK155 pKa = 10.49AKK157 pKa = 10.36RR158 pKa = 11.84VKK160 pKa = 10.78LSDD163 pKa = 4.73LDD165 pKa = 5.2KK166 pKa = 11.35LDD168 pKa = 3.24NWWYY172 pKa = 10.0IGCTGTGKK180 pKa = 10.36SRR182 pKa = 11.84TARR185 pKa = 11.84QLYY188 pKa = 7.94PDD190 pKa = 5.05AYY192 pKa = 9.77IKK194 pKa = 10.4QCNKK198 pKa = 7.01WWNDD202 pKa = 3.04YY203 pKa = 11.11DD204 pKa = 4.3GEE206 pKa = 4.35EE207 pKa = 4.07TVIIDD212 pKa = 5.38DD213 pKa = 4.99LNPDD217 pKa = 3.93HH218 pKa = 7.18KK219 pKa = 11.29FMANFIDD226 pKa = 3.86QWCDD230 pKa = 2.95HH231 pKa = 6.49YY232 pKa = 11.34PFPAEE237 pKa = 3.92FKK239 pKa = 10.57GGQKK243 pKa = 9.58TIRR246 pKa = 11.84PKK248 pKa = 10.71RR249 pKa = 11.84FIITTRR255 pKa = 11.84YY256 pKa = 7.83TIEE259 pKa = 4.63EE260 pKa = 3.89ILGEE264 pKa = 4.2NNFSQIEE271 pKa = 4.05SWKK274 pKa = 10.3RR275 pKa = 11.84RR276 pKa = 11.84FQIKK280 pKa = 9.79EE281 pKa = 3.73FF282 pKa = 4.02

Molecular weight: 33.68 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4UI03|A0A0B4UI03_9VIRU Putative capsid protein OS=Odonata-associated circular virus-9 OX=1592129 PE=4 SV=1
MM1 pKa = 7.66ARR3 pKa = 11.84RR4 pKa = 11.84KK5 pKa = 9.53YY6 pKa = 10.48FRR8 pKa = 11.84RR9 pKa = 11.84NPYY12 pKa = 8.93RR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84FKK17 pKa = 10.32RR18 pKa = 11.84RR19 pKa = 11.84NYY21 pKa = 9.25RR22 pKa = 11.84FSSRR26 pKa = 11.84RR27 pKa = 11.84RR28 pKa = 11.84SGFRR32 pKa = 11.84RR33 pKa = 11.84WRR35 pKa = 11.84VARR38 pKa = 11.84QKK40 pKa = 11.33NLVFSNSQLVTLRR53 pKa = 11.84YY54 pKa = 9.57CKK56 pKa = 10.47NIQLNPANGATISVATFRR74 pKa = 11.84ANDD77 pKa = 3.13IYY79 pKa = 11.12FCDD82 pKa = 4.0GLAGSEE88 pKa = 4.06PKK90 pKa = 9.91GTTEE94 pKa = 3.55WEE96 pKa = 4.16GFYY99 pKa = 11.04NHH101 pKa = 6.45YY102 pKa = 10.7LVIGSKK108 pKa = 7.14MTAMFNSGSSTTSNGAGTVGVVLTDD133 pKa = 3.63TSNVAYY139 pKa = 9.92INNTDD144 pKa = 3.25VMTEE148 pKa = 3.56PRR150 pKa = 11.84ARR152 pKa = 11.84WKK154 pKa = 10.59IIGNQTGTGTKK165 pKa = 9.53TITKK169 pKa = 9.56GYY171 pKa = 8.75SPKK174 pKa = 10.66KK175 pKa = 10.06FFTIHH180 pKa = 6.5NLLDD184 pKa = 3.79NQEE187 pKa = 4.52HH188 pKa = 6.13YY189 pKa = 10.24GAPVSVSPPEE199 pKa = 3.54IAFFQVFFAPHH210 pKa = 6.22AASAGTGGPWVTVIIDD226 pKa = 3.73YY227 pKa = 10.92KK228 pKa = 11.31VMYY231 pKa = 8.56TGPKK235 pKa = 9.62RR236 pKa = 11.84IAPSS240 pKa = 3.13

Molecular weight: 27.07 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

522

240

282

261.0

30.37

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.747 ± 1.189

1.341 ± 0.344

4.598 ± 1.423

4.789 ± 1.553

5.364 ± 0.601

6.13 ± 1.494

2.299 ± 0.429

7.471 ± 1.394

8.238 ± 1.913

5.172 ± 0.965

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.916 ± 0.114

6.322 ± 0.516

4.789 ± 0.143

4.023 ± 1.033

7.088 ± 1.41

5.747 ± 1.189

7.28 ± 1.28

4.023 ± 1.793

2.107 ± 0.299

5.556 ± 0.377
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski