Lysinibacillus telephonicus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus

Average proteome isoelectric point is 6.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3959 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3S0J0Z7|A0A3S0J0Z7_9BACI Uncharacterized protein OS=Lysinibacillus telephonicus OX=1714840 GN=EKG35_13430 PE=4 SV=1
MM1 pKa = 7.5KK2 pKa = 10.64KK3 pKa = 10.43LGTFLLSFSLLIALFPQITMAAQDD27 pKa = 3.73TNFEE31 pKa = 3.99QDD33 pKa = 3.91LINYY37 pKa = 8.58LEE39 pKa = 4.08QVSNEE44 pKa = 3.82RR45 pKa = 11.84GFEE48 pKa = 4.05VTKK51 pKa = 10.89EE52 pKa = 3.99DD53 pKa = 3.29IALSLSYY60 pKa = 11.38YY61 pKa = 10.33EE62 pKa = 6.01DD63 pKa = 3.18SLEE66 pKa = 4.17NYY68 pKa = 7.66NTVEE72 pKa = 4.22EE73 pKa = 4.4LSQFLGEE80 pKa = 4.65IIKK83 pKa = 10.49ADD85 pKa = 3.73YY86 pKa = 11.33SNVDD90 pKa = 3.67SIYY93 pKa = 10.15EE94 pKa = 3.96QYY96 pKa = 11.29EE97 pKa = 4.01LTEE100 pKa = 4.08EE101 pKa = 4.63SLVQLLKK108 pKa = 11.18EE109 pKa = 4.16NGEE112 pKa = 4.05QLSDD116 pKa = 4.17YY117 pKa = 11.03IFLDD121 pKa = 4.08DD122 pKa = 5.9LDD124 pKa = 4.17TAVYY128 pKa = 9.29FYY130 pKa = 11.01TEE132 pKa = 4.58DD133 pKa = 3.45GTFEE137 pKa = 4.43RR138 pKa = 11.84DD139 pKa = 3.19PNFEE143 pKa = 4.14QNLIDD148 pKa = 3.96YY149 pKa = 9.52LADD152 pKa = 3.35VSDD155 pKa = 3.47QRR157 pKa = 11.84GYY159 pKa = 11.34NVTRR163 pKa = 11.84DD164 pKa = 3.53NVVNSLAIYY173 pKa = 9.39EE174 pKa = 4.47SNLEE178 pKa = 4.02DD179 pKa = 4.08FEE181 pKa = 5.54SVEE184 pKa = 3.99QLSDD188 pKa = 3.43FLGEE192 pKa = 4.39VIQADD197 pKa = 4.56YY198 pKa = 11.76SNLDD202 pKa = 3.54YY203 pKa = 10.84FVEE206 pKa = 4.5NYY208 pKa = 10.44GLSQQEE214 pKa = 4.31LFNLLEE220 pKa = 4.72SNDD223 pKa = 3.88EE224 pKa = 4.42NINDD228 pKa = 4.07YY229 pKa = 10.91IYY231 pKa = 10.46IDD233 pKa = 4.78DD234 pKa = 5.47LDD236 pKa = 3.89NTVWKK241 pKa = 10.85YY242 pKa = 10.94VGNDD246 pKa = 3.25LSVMFEE252 pKa = 4.28YY253 pKa = 9.69LTEE256 pKa = 4.71DD257 pKa = 4.16LLPLFQEE264 pKa = 4.05IDD266 pKa = 3.53LTDD269 pKa = 3.69EE270 pKa = 3.7EE271 pKa = 4.66LKK273 pKa = 10.85RR274 pKa = 11.84FEE276 pKa = 3.99NHH278 pKa = 7.06LISLEE283 pKa = 4.04DD284 pKa = 3.4HH285 pKa = 6.77FSNPEE290 pKa = 3.81TLEE293 pKa = 4.06LLEE296 pKa = 3.96QLNYY300 pKa = 10.65EE301 pKa = 4.77LIALEE306 pKa = 4.49SDD308 pKa = 3.76MNSQPTVEE316 pKa = 4.01QMEE319 pKa = 4.29MSLSILEE326 pKa = 4.64KK327 pKa = 10.34IFSILQLKK335 pKa = 10.24ASYY338 pKa = 11.07SLVNDD343 pKa = 5.27AIEE346 pKa = 4.33TPISLMDD353 pKa = 3.88LMKK356 pKa = 10.24MEE358 pKa = 4.29VLEE361 pKa = 4.4GTDD364 pKa = 3.6LKK366 pKa = 11.33VAFYY370 pKa = 10.78SSEE373 pKa = 3.95GQFLGDD379 pKa = 4.55LIITEE384 pKa = 4.19EE385 pKa = 4.57FINSGLVTDD394 pKa = 5.03LGEE397 pKa = 4.28QIVDD401 pKa = 3.86SAVEE405 pKa = 4.01QPPVVQPKK413 pKa = 9.87KK414 pKa = 10.52QINTTQTLAEE424 pKa = 4.58EE425 pKa = 4.33YY426 pKa = 8.8HH427 pKa = 5.2TVKK430 pKa = 10.59GGKK433 pKa = 9.0LPKK436 pKa = 9.21TASDD440 pKa = 4.27YY441 pKa = 11.22IPNALFGLFIVMLGIFMYY459 pKa = 10.58GKK461 pKa = 10.2VRR463 pKa = 11.84TSS465 pKa = 2.77

Molecular weight: 53.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3S0I3B6|A0A3S0I3B6_9BACI HAMP domain-containing protein OS=Lysinibacillus telephonicus OX=1714840 GN=EKG35_04675 PE=4 SV=1
MM1 pKa = 7.36KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 9.54QPKK8 pKa = 9.44KK9 pKa = 7.96RR10 pKa = 11.84KK11 pKa = 8.69HH12 pKa = 5.94SKK14 pKa = 8.54VHH16 pKa = 5.68GFRR19 pKa = 11.84ARR21 pKa = 11.84MSTKK25 pKa = 10.19NGRR28 pKa = 11.84KK29 pKa = 8.91VLAARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 8.81GRR39 pKa = 11.84KK40 pKa = 8.75VLSAA44 pKa = 4.05

Molecular weight: 5.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3959

0

3959

1178354

14

1912

297.6

33.44

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.84 ± 0.044

0.715 ± 0.011

4.941 ± 0.031

7.608 ± 0.046

4.659 ± 0.039

6.603 ± 0.037

1.911 ± 0.015

8.648 ± 0.041

6.83 ± 0.039

9.737 ± 0.046

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.563 ± 0.016

4.952 ± 0.034

3.438 ± 0.026

3.71 ± 0.027

3.72 ± 0.032

6.132 ± 0.035

5.474 ± 0.032

6.928 ± 0.032

0.965 ± 0.013

3.626 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski