Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
Average proteome isoelectric point is 6.25
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4336 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|D4ZFW9|D4ZFW9_SHEVD Endo/exonuclease/phosphatase domain-containing protein OS=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) OX=637905 GN=SVI_0597 PE=4 SV=1
MM1 pKa = 7.51 KK2 pKa = 10.27 LDD4 pKa = 5.28 LIYY7 pKa = 10.71 TCFLLLTRR15 pKa = 11.84 WVSRR19 pKa = 11.84 FISSLLSGGHH29 pKa = 6.37 HH30 pKa = 6.93 LSKK33 pKa = 10.79 LISKK37 pKa = 9.3 LVSRR41 pKa = 11.84 EE42 pKa = 3.6 GDD44 pKa = 3.4 NVTHH48 pKa = 7.51 LSGLLLLITCFLAVQQAKK66 pKa = 10.06 AVEE69 pKa = 4.42 HH70 pKa = 5.88 EE71 pKa = 4.59 LEE73 pKa = 4.4 SLSADD78 pKa = 2.98 ITEE81 pKa = 4.42 TEE83 pKa = 5.15 LIIIDD88 pKa = 4.07 PAVHH92 pKa = 6.88 DD93 pKa = 4.85 PYY95 pKa = 11.04 MLYY98 pKa = 10.07 QALNAKK104 pKa = 9.21 FRR106 pKa = 11.84 QHH108 pKa = 7.06 LGQNSKK114 pKa = 7.24 TQIVFLRR121 pKa = 11.84 PEE123 pKa = 4.64 LEE125 pKa = 4.08 PLQQILIAIKK135 pKa = 10.33 DD136 pKa = 3.94 KK137 pKa = 11.27 PNLSQLSIISHH148 pKa = 6.86 ASNGAIFLAGKK159 pKa = 9.01 WIDD162 pKa = 3.33 KK163 pKa = 10.73 DD164 pKa = 4.05 YY165 pKa = 11.2 INQHH169 pKa = 5.53 KK170 pKa = 11.06 AMMSEE175 pKa = 4.04 IGSSLKK181 pKa = 10.62 KK182 pKa = 10.71 GADD185 pKa = 3.15 LKK187 pKa = 11.49 LYY189 pKa = 10.11 GCNLAAGLSGKK200 pKa = 10.2 RR201 pKa = 11.84 FVNRR205 pKa = 11.84 VAEE208 pKa = 4.15 LTQLDD213 pKa = 4.16 VAASTDD219 pKa = 3.51 TTGGAKK225 pKa = 9.53 QGHH228 pKa = 5.24 NWEE231 pKa = 4.58 LEE233 pKa = 4.3 YY234 pKa = 10.95 KK235 pKa = 10.2 VGSINSRR242 pKa = 11.84 SLFSEE247 pKa = 4.69 ALPTSYY253 pKa = 11.2 SSTLNHH259 pKa = 5.98 FRR261 pKa = 11.84 YY262 pKa = 8.69 GTMAVEE268 pKa = 5.31 PITGEE273 pKa = 3.93 SGKK276 pKa = 9.99 VRR278 pKa = 11.84 LKK280 pKa = 10.57 VQIGYY285 pKa = 7.42 TLNHH289 pKa = 6.84 YY290 pKa = 10.91 IMTQLVNSPVGTVNCQMPYY309 pKa = 10.1 LQSFSWGDD317 pKa = 3.49 GQGQGGICVQLLSKK331 pKa = 10.19 DD332 pKa = 3.45 TATNDD337 pKa = 3.22 ALVEE341 pKa = 4.3 VVSIGANGYY350 pKa = 9.84 EE351 pKa = 4.36 PGLVHH356 pKa = 7.08 QYY358 pKa = 10.28 QADD361 pKa = 3.81 GNYY364 pKa = 7.9 TLSWSSYY371 pKa = 8.24 ARR373 pKa = 11.84 SPAMSQDD380 pKa = 3.05 NAYY383 pKa = 8.77 WRR385 pKa = 11.84 AEE387 pKa = 3.62 ASTSVVNGEE396 pKa = 4.0 ITNASPVTAVSALVYY411 pKa = 10.78 VRR413 pKa = 11.84 DD414 pKa = 3.89 DD415 pKa = 3.95 HH416 pKa = 6.75 PFTMQISGVDD426 pKa = 3.37 QNGDD430 pKa = 3.43 QIRR433 pKa = 11.84 YY434 pKa = 8.45 RR435 pKa = 11.84 WGKK438 pKa = 9.08 QKK440 pKa = 10.62 EE441 pKa = 4.47 FYY443 pKa = 10.62 SGNSNNEE450 pKa = 3.79 VKK452 pKa = 10.67 KK453 pKa = 8.59 PTGMQLSAEE462 pKa = 4.28 GLITWDD468 pKa = 4.42 LAADD472 pKa = 4.58 LANGDD477 pKa = 4.89 LITYY481 pKa = 7.59 TDD483 pKa = 3.65 NANPSTVTSNRR494 pKa = 11.84 WQAAIVLEE502 pKa = 4.4 DD503 pKa = 3.78 LDD505 pKa = 3.88 INGVVKK511 pKa = 10.77 SKK513 pKa = 11.31 APLDD517 pKa = 3.63 FVFIISDD524 pKa = 4.02 PDD526 pKa = 3.4 NASPGFNPAPEE537 pKa = 4.03 ITATQYY543 pKa = 10.66 IQLHH547 pKa = 4.58 QTTTFTITATDD558 pKa = 3.17 VDD560 pKa = 4.61 EE561 pKa = 5.84 NGDD564 pKa = 3.78 PDD566 pKa = 3.91 VPSISVLNPPSTDD579 pKa = 2.99 TAIWSTSTISQDD591 pKa = 3.08 PTTGTSVIEE600 pKa = 4.37 VTFSPSDD607 pKa = 3.59 DD608 pKa = 3.82 MLGKK612 pKa = 10.2 AYY614 pKa = 10.37 AVIFSAKK621 pKa = 9.45 DD622 pKa = 3.34 SNGITSEE629 pKa = 3.94 AAVNLVIVNEE639 pKa = 4.09 APIAQDD645 pKa = 3.95 DD646 pKa = 4.46 SAFTQQGQMVIVDD659 pKa = 3.67 VLANDD664 pKa = 4.16 SDD666 pKa = 4.58 PDD668 pKa = 4.13 GDD670 pKa = 4.61 PLTITQFNAPNGTVVLNPDD689 pKa = 3.09 NTISYY694 pKa = 8.91 TPDD697 pKa = 3.06 ANFSGLEE704 pKa = 3.9 IISYY708 pKa = 9.58 VISDD712 pKa = 4.78 GIGSVASANILVTVNGKK729 pKa = 9.23 PIAQDD734 pKa = 3.41 DD735 pKa = 4.63 LFTINEE741 pKa = 4.24 DD742 pKa = 3.42 TSSVLDD748 pKa = 3.51 VLANDD753 pKa = 4.57 SEE755 pKa = 4.67 PDD757 pKa = 3.52 ADD759 pKa = 4.14 TLNITLTSASFGQLSLVNNLVTYY782 pKa = 8.26 TPNGQFYY789 pKa = 8.33 GTDD792 pKa = 3.1 TFSYY796 pKa = 9.67 TISDD800 pKa = 3.8 GLGGSDD806 pKa = 3.25 TASVTVTVVSINDD819 pKa = 3.51 LPVANNDD826 pKa = 3.41 LAEE829 pKa = 4.83 IDD831 pKa = 4.15 EE832 pKa = 4.83 DD833 pKa = 3.8 QSIAISVLANDD844 pKa = 4.81 SDD846 pKa = 4.42 PEE848 pKa = 4.08 NDD850 pKa = 3.82 PLSVTAHH857 pKa = 5.6 QSLHH861 pKa = 5.39 GTTSVNLDD869 pKa = 3.11 QSLTYY874 pKa = 10.66 VPALNYY880 pKa = 9.47 FGPDD884 pKa = 2.98 QITYY888 pKa = 8.89 TISDD892 pKa = 3.88 GNGGEE897 pKa = 4.3 STATVAVTVTPINDD911 pKa = 3.43 APVAIDD917 pKa = 4.77 DD918 pKa = 4.16 VATLAEE924 pKa = 4.41 DD925 pKa = 3.69 TSVLLTPLSNDD936 pKa = 2.67 VDD938 pKa = 4.15 VEE940 pKa = 4.24 GDD942 pKa = 3.46 LLSYY946 pKa = 10.66 VSVVASSGLVTVNADD961 pKa = 3.17 MSVLYY966 pKa = 9.97 TPAEE970 pKa = 3.98 NFQGNVQINYY980 pKa = 9.76 LISDD984 pKa = 4.2 PSGLQSAAVISVSVTQVNDD1003 pKa = 3.41 APKK1006 pKa = 10.74 ANADD1010 pKa = 3.79 TASVDD1015 pKa = 3.36 EE1016 pKa = 5.63 DD1017 pKa = 3.74 GTLTYY1022 pKa = 10.94 AVLDD1026 pKa = 3.61 NDD1028 pKa = 3.98 TDD1030 pKa = 4.15 VEE1032 pKa = 4.27 NHH1034 pKa = 6.37 ALTVSVAQSSHH1045 pKa = 4.36 GQANVEE1051 pKa = 4.26 ANGSITYY1058 pKa = 10.1 VPDD1061 pKa = 4.26 PDD1063 pKa = 5.13 FNGSDD1068 pKa = 3.54 SVIYY1072 pKa = 9.91 TIDD1075 pKa = 4.49 DD1076 pKa = 3.5 GHH1078 pKa = 6.76 GGQDD1082 pKa = 2.92 SALFSVTVNGVNDD1095 pKa = 3.47 EE1096 pKa = 4.91 PIAVDD1101 pKa = 4.56 DD1102 pKa = 4.94 SVTLDD1107 pKa = 3.19 EE1108 pKa = 5.14 DD1109 pKa = 4.13 ASVTVPVLANDD1120 pKa = 3.63 SDD1122 pKa = 4.11 VDD1124 pKa = 3.94 GDD1126 pKa = 4.21 SLTVTVQSSVNGTASVTALGLVLYY1150 pKa = 8.68 TPNANFNGADD1160 pKa = 3.32 SLTYY1164 pKa = 10.15 TIEE1167 pKa = 4.6 DD1168 pKa = 4.02 GNGGSASAVLSIFVSSVNDD1187 pKa = 3.18 QPLAMNDD1194 pKa = 3.57 TASLDD1199 pKa = 3.66 EE1200 pKa = 4.3 DD1201 pKa = 3.84 TSIRR1205 pKa = 11.84 VHH1207 pKa = 6.32 VLANDD1212 pKa = 3.62 SDD1214 pKa = 4.42 LDD1216 pKa = 3.78 NDD1218 pKa = 4.4 LLVVTAQSASHH1229 pKa = 6.66 GDD1231 pKa = 3.4 VTVGLDD1237 pKa = 3.43 GSISYY1242 pKa = 9.23 MPEE1245 pKa = 3.26 QDD1247 pKa = 3.51 FNGVDD1252 pKa = 3.35 SVTYY1256 pKa = 10.63 SIDD1259 pKa = 3.8 DD1260 pKa = 3.71 GHH1262 pKa = 7.1 GGTAQALLTITVNAVNDD1279 pKa = 3.82 LPVAVDD1285 pKa = 3.87 DD1286 pKa = 4.11 YY1287 pKa = 11.86 AYY1289 pKa = 9.17 VTEE1292 pKa = 5.24 DD1293 pKa = 3.25 GSVTFSVLSNDD1304 pKa = 3.15 TDD1306 pKa = 3.08 VDD1308 pKa = 3.89 NDD1310 pKa = 3.75 VLTLTLNAASNGSTINHH1327 pKa = 6.49 NDD1329 pKa = 2.86 GSVSYY1334 pKa = 10.3 TPDD1337 pKa = 3.2 ANFNGSDD1344 pKa = 3.31 SVQYY1348 pKa = 10.63 SVSDD1352 pKa = 3.87 GQGGEE1357 pKa = 4.06 AQAVIYY1363 pKa = 10.72 LNVTAVNDD1371 pKa = 3.82 APVAEE1376 pKa = 4.32 VDD1378 pKa = 4.68 LISMEE1383 pKa = 4.51 EE1384 pKa = 3.97 DD1385 pKa = 2.87 TSLNFDD1391 pKa = 4.51 LLLNDD1396 pKa = 3.55 TDD1398 pKa = 5.06 VEE1400 pKa = 4.49 FSLNPASAEE1409 pKa = 3.96 LLDD1412 pKa = 4.95 LPQHH1416 pKa = 5.19 MSVRR1420 pKa = 11.84 VVNGVVTLTPDD1431 pKa = 3.26 ADD1433 pKa = 4.33 FNGSDD1438 pKa = 3.2 SLTYY1442 pKa = 10.01 RR1443 pKa = 11.84 VSDD1446 pKa = 4.14 GEE1448 pKa = 4.46 GKK1450 pKa = 10.41 ASNIAVVTIEE1460 pKa = 3.94 VAAVNDD1466 pKa = 4.0 APRR1469 pKa = 11.84 PEE1471 pKa = 4.47 PDD1473 pKa = 3.33 FVSVDD1478 pKa = 3.35 EE1479 pKa = 5.97 DD1480 pKa = 3.3 ITSDD1484 pKa = 4.22 IEE1486 pKa = 4.3 VLANDD1491 pKa = 4.28 IDD1493 pKa = 4.24 IDD1495 pKa = 4.25 DD1496 pKa = 4.6 SGEE1499 pKa = 4.01 SSLDD1503 pKa = 2.99 IHH1505 pKa = 6.83 SVVVVQAPLHH1515 pKa = 5.34 GQLTNVDD1522 pKa = 4.05 GVLSYY1527 pKa = 11.03 HH1528 pKa = 7.14 PDD1530 pKa = 3.28 SNYY1533 pKa = 10.42 VGSDD1537 pKa = 3.02 SFSYY1541 pKa = 9.98 TVADD1545 pKa = 3.73 MIGAVSQASLVTLNVQGINDD1565 pKa = 3.83 APVAVSDD1572 pKa = 4.69 SFTSDD1577 pKa = 2.96 EE1578 pKa = 4.32 DD1579 pKa = 3.71 LGISFNVTTNDD1590 pKa = 3.07 TDD1592 pKa = 3.62 IDD1594 pKa = 3.96 SQLAPEE1600 pKa = 4.32 SVSIFSAPTHH1610 pKa = 5.55 GVVSISATGEE1620 pKa = 3.71 LTYY1623 pKa = 10.58 TPNADD1628 pKa = 3.5 YY1629 pKa = 10.88 FGDD1632 pKa = 3.79 DD1633 pKa = 3.41 SFSYY1637 pKa = 9.26 TVKK1640 pKa = 10.49 DD1641 pKa = 3.36 AEE1643 pKa = 4.71 GAVSLPGTVSVSLASINDD1661 pKa = 3.59 APRR1664 pKa = 11.84 LDD1666 pKa = 5.19 DD1667 pKa = 6.38 DD1668 pKa = 4.15 MAQLMEE1674 pKa = 6.01 DD1675 pKa = 3.79 GVNDD1679 pKa = 3.71 INVLGNDD1686 pKa = 3.6 LDD1688 pKa = 3.97 IDD1690 pKa = 4.29 GEE1692 pKa = 4.4 LVLASLMVTVMPEE1705 pKa = 3.57 HH1706 pKa = 6.04 GTVSILASGLLRR1718 pKa = 11.84 YY1719 pKa = 7.96 TPDD1722 pKa = 3.39 DD1723 pKa = 3.65 NYY1725 pKa = 11.51 YY1726 pKa = 10.44 GADD1729 pKa = 3.36 SFSYY1733 pKa = 10.48 SINDD1737 pKa = 3.3 NDD1739 pKa = 4.65 GVTSEE1744 pKa = 5.12 ANVQITIDD1752 pKa = 4.26 SINDD1756 pKa = 3.08 RR1757 pKa = 11.84 PMAQDD1762 pKa = 3.83 DD1763 pKa = 4.42 GAVLDD1768 pKa = 4.32 EE1769 pKa = 5.62 DD1770 pKa = 4.66 SLITLDD1776 pKa = 4.52 ILANDD1781 pKa = 3.94 TDD1783 pKa = 4.92 LDD1785 pKa = 3.9 GALDD1789 pKa = 3.77 VSSVIIINAPTSGIVEE1805 pKa = 4.34 VNSDD1809 pKa = 3.4 GSLLYY1814 pKa = 10.42 IPDD1817 pKa = 3.8 ANFNGSDD1824 pKa = 3.36 SFSYY1828 pKa = 10.25 QVSDD1832 pKa = 3.94 DD1833 pKa = 4.02 GGGSSEE1839 pKa = 4.01 IAFVSLDD1846 pKa = 3.73 VISVNDD1852 pKa = 3.67 APQISGNAPEE1862 pKa = 4.19 TLIEE1866 pKa = 4.39 GEE1868 pKa = 4.69 SYY1870 pKa = 11.05 QFTPSSLDD1878 pKa = 3.04 IDD1880 pKa = 3.98 NDD1882 pKa = 3.99 TLIFSITGLPIWASFDD1898 pKa = 3.46 GLTGTLSGIAAYY1910 pKa = 10.08 EE1911 pKa = 4.04 NVASYY1916 pKa = 10.93 GPMVISVSDD1925 pKa = 3.54 GVIEE1929 pKa = 4.27 VEE1931 pKa = 4.94 LEE1933 pKa = 3.58 AFYY1936 pKa = 10.78 IQVEE1940 pKa = 4.4 VLDD1943 pKa = 4.47 SDD1945 pKa = 4.21 GDD1947 pKa = 4.49 SIPDD1951 pKa = 3.77 TIEE1954 pKa = 4.5 IEE1956 pKa = 4.28 LGLDD1960 pKa = 3.17 PFDD1963 pKa = 5.9 AYY1965 pKa = 10.88 DD1966 pKa = 4.08 AGQDD1970 pKa = 3.36 ADD1972 pKa = 4.96 GDD1974 pKa = 4.23 GLSNLDD1980 pKa = 3.24 EE1981 pKa = 4.31 WLGGSNLYY1989 pKa = 10.61 LDD1991 pKa = 5.18 DD1992 pKa = 4.28 VAPEE1996 pKa = 4.74 LIIPDD2001 pKa = 5.34 DD2002 pKa = 3.2 IWIDD2006 pKa = 3.43 ATGLFTGVSIGQAQAYY2022 pKa = 9.84 DD2023 pKa = 3.77 YY2024 pKa = 11.49 VDD2026 pKa = 3.49 GVRR2029 pKa = 11.84 QICCEE2034 pKa = 4.04 DD2035 pKa = 3.47 LSNTMVSDD2043 pKa = 3.99 QPEE2046 pKa = 4.8 LPPGTHH2052 pKa = 4.61 QVTWTAVDD2060 pKa = 3.03 AAGNVSEE2067 pKa = 5.31 LIQNIFVRR2075 pKa = 11.84 PLISLPQDD2083 pKa = 3.24 QIVSRR2088 pKa = 11.84 GNRR2091 pKa = 11.84 VLVSVYY2097 pKa = 10.86 LNGPSPEE2104 pKa = 4.24 YY2105 pKa = 9.02 PLSVAYY2111 pKa = 9.98 SVAGSAVEE2119 pKa = 4.28 GLHH2122 pKa = 6.96 HH2123 pKa = 7.53 DD2124 pKa = 3.74 LTSAVVTFEE2133 pKa = 4.2 PGQVVARR2140 pKa = 11.84 IEE2142 pKa = 4.06 FTALDD2147 pKa = 3.84 IEE2149 pKa = 4.49 VDD2151 pKa = 3.49 ALQDD2155 pKa = 3.6 EE2156 pKa = 5.01 LVSIHH2161 pKa = 7.54 LDD2163 pKa = 3.35 DD2164 pKa = 4.75 QLNLGSKK2171 pKa = 9.12 KK2172 pKa = 10.31 DD2173 pKa = 3.53 HH2174 pKa = 6.42 YY2175 pKa = 10.75 VTITLDD2181 pKa = 3.37 NLAPEE2186 pKa = 4.61 VQVSSYY2192 pKa = 9.98 QSEE2195 pKa = 4.26 EE2196 pKa = 3.55 LRR2198 pKa = 11.84 TWVAQVNGVVEE2209 pKa = 4.37 VQASYY2214 pKa = 11.53 SDD2216 pKa = 4.33 PNIQNSLTLDD2226 pKa = 3.19 WSLTDD2231 pKa = 4.4 SEE2233 pKa = 4.39 LQEE2236 pKa = 4.07 VQLPEE2241 pKa = 4.28 GQEE2244 pKa = 3.95 VMQKK2248 pKa = 10.13 VSSLGVNNIKK2258 pKa = 10.46 LQTWLFDD2265 pKa = 3.98 PSGLAEE2271 pKa = 4.0 GVYY2274 pKa = 9.64 TIRR2277 pKa = 11.84 AKK2279 pKa = 9.92 VTDD2282 pKa = 4.33 DD2283 pKa = 3.79 GEE2285 pKa = 4.74 PNLSHH2290 pKa = 7.32 FSEE2293 pKa = 4.11 LRR2295 pKa = 11.84 VRR2297 pKa = 11.84 VSEE2300 pKa = 4.16 HH2301 pKa = 6.88 LPLLTMADD2309 pKa = 3.45 TDD2311 pKa = 3.95 GDD2313 pKa = 4.24 GIADD2317 pKa = 3.65 IEE2319 pKa = 4.35 EE2320 pKa = 4.39 GLVDD2324 pKa = 4.3 SDD2326 pKa = 4.05 GDD2328 pKa = 4.25 GIPDD2332 pKa = 3.62 YY2333 pKa = 10.93 LDD2335 pKa = 4.75 PIVAANVLPEE2345 pKa = 4.5 RR2346 pKa = 11.84 IVNTEE2351 pKa = 3.89 SYY2353 pKa = 10.69 LVEE2356 pKa = 4.45 CEE2358 pKa = 4.37 SGVKK2362 pKa = 9.9 CRR2364 pKa = 11.84 LGQYY2368 pKa = 10.7 AMSGVYY2374 pKa = 9.15 MGAQVAGSDD2383 pKa = 3.03 IHH2385 pKa = 7.75 ANLQGIMPGDD2395 pKa = 3.72 FVDD2398 pKa = 3.38 VGGVFNIEE2406 pKa = 3.98 ALDD2409 pKa = 4.37 LSEE2412 pKa = 4.8 QNQAVNIVIPQRR2424 pKa = 11.84 NPIPEE2429 pKa = 4.0 NAGYY2433 pKa = 10.47 RR2434 pKa = 11.84 HH2435 pKa = 6.85 FIHH2438 pKa = 7.5 DD2439 pKa = 3.99 KK2440 pKa = 8.41 GWFIFSVNADD2450 pKa = 3.94 NQLMSAPGAAGYY2462 pKa = 9.07 CPPPGSDD2469 pKa = 3.67 EE2470 pKa = 4.22 YY2471 pKa = 11.42 TDD2473 pKa = 4.68 GLNQGDD2479 pKa = 3.73 WCLQLVIKK2487 pKa = 10.78 DD2488 pKa = 3.74 GGINDD2493 pKa = 4.16 ADD2495 pKa = 3.7 EE2496 pKa = 4.43 MVNGAVNITGCLIQEE2511 pKa = 4.33 EE2512 pKa = 4.78 LVQPGSEE2519 pKa = 4.05 TVEE2522 pKa = 3.89 VEE2524 pKa = 3.67 ILTEE2528 pKa = 4.24 GGGASSGASMQIFILYY2544 pKa = 9.52 LLAIIAFFRR2553 pKa = 11.84 NGFLRR2558 pKa = 11.84 NGLFRR2563 pKa = 11.84 NGLFRR2568 pKa = 11.84 NGLLNNRR2575 pKa = 11.84 RR2576 pKa = 11.84 LKK2578 pKa = 10.5 SLRR2581 pKa = 11.84 HH2582 pKa = 5.44 RR2583 pKa = 11.84 CQVHH2587 pKa = 5.95 RR2588 pKa = 11.84 LSLLVTIIFVSLTTQVKK2605 pKa = 10.2 ADD2607 pKa = 3.89 SAPQVIPEE2615 pKa = 4.76 DD2616 pKa = 3.92 VSQTGFFISGLFARR2630 pKa = 11.84 SQGSDD2635 pKa = 2.77 NTGDD2639 pKa = 3.21 INQFLVDD2646 pKa = 4.27 AGLNAQVFEE2655 pKa = 5.08 IDD2657 pKa = 4.82 DD2658 pKa = 3.97 STSGWKK2664 pKa = 10.33 LGAGYY2669 pKa = 10.7 AFTPSWSVALEE2680 pKa = 4.06 YY2681 pKa = 10.22 IDD2683 pKa = 4.72 LGEE2686 pKa = 3.86 VSVRR2690 pKa = 11.84 IKK2692 pKa = 10.98 GVTDD2696 pKa = 3.69 DD2697 pKa = 4.71 PEE2699 pKa = 5.31 AFYY2702 pKa = 9.4 ATASQFHH2709 pKa = 7.25 PDD2711 pKa = 3.28 SAKK2714 pKa = 10.93 GLGLNLGYY2722 pKa = 10.21 RR2723 pKa = 11.84 YY2724 pKa = 10.21 QFITDD2729 pKa = 3.36 VSALLHH2735 pKa = 6.54 LGLFHH2740 pKa = 6.68 WQADD2744 pKa = 3.87 FTSYY2748 pKa = 11.04 DD2749 pKa = 3.1 IDD2751 pKa = 3.91 TQQVATSEE2759 pKa = 4.38 DD2760 pKa = 4.09 DD2761 pKa = 3.99 GNSLYY2766 pKa = 11.16 GGIGVEE2772 pKa = 4.28 YY2773 pKa = 10.67 ALTQNIRR2780 pKa = 11.84 FSVQWSHH2787 pKa = 7.07 FSLDD2791 pKa = 3.44 EE2792 pKa = 3.87 QSRR2795 pKa = 11.84 DD2796 pKa = 3.62 LIGVGVQYY2804 pKa = 10.84 QFF2806 pKa = 3.95
Molecular weight: 299.08 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.675
IPC2_protein 3.681
IPC_protein 3.745
Toseland 3.503
ProMoST 3.897
Dawson 3.732
Bjellqvist 3.884
Wikipedia 3.681
Rodwell 3.554
Grimsley 3.401
Solomon 3.732
Lehninger 3.694
Nozaki 3.834
DTASelect 4.126
Thurlkill 3.554
EMBOSS 3.681
Sillero 3.859
Patrickios 1.278
IPC_peptide 3.732
IPC2_peptide 3.834
IPC2.peptide.svr19 3.761
Protein with the highest isoelectric point:
>tr|D4ZD84|D4ZD84_SHEVD Uncharacterized protein OS=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) OX=637905 GN=SVI_0035 PE=4 SV=1
MM1 pKa = 7.69 SKK3 pKa = 9.01 RR4 pKa = 11.84 TFQPSNLKK12 pKa = 10.14 RR13 pKa = 11.84 KK14 pKa = 9.13 RR15 pKa = 11.84 SHH17 pKa = 6.17 GFRR20 pKa = 11.84 ARR22 pKa = 11.84 MATVGGRR29 pKa = 11.84 KK30 pKa = 9.01 VLARR34 pKa = 11.84 RR35 pKa = 11.84 RR36 pKa = 11.84 AKK38 pKa = 10.39 GRR40 pKa = 11.84 ARR42 pKa = 11.84 LSAA45 pKa = 3.91
Molecular weight: 5.15 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.523
IPC2_protein 11.242
IPC_protein 12.837
Toseland 13.013
ProMoST 13.495
Dawson 13.013
Bjellqvist 12.998
Wikipedia 13.481
Rodwell 12.676
Grimsley 13.042
Solomon 13.495
Lehninger 13.408
Nozaki 13.013
DTASelect 12.998
Thurlkill 13.013
EMBOSS 13.51
Sillero 13.013
Patrickios 12.398
IPC_peptide 13.51
IPC2_peptide 12.486
IPC2.peptide.svr19 9.177
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4336
0
4336
1350730
30
5059
311.5
34.49
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.55 ± 0.043
1.021 ± 0.012
5.776 ± 0.048
5.902 ± 0.034
4.018 ± 0.026
6.95 ± 0.035
2.163 ± 0.019
6.608 ± 0.032
5.327 ± 0.04
10.657 ± 0.055
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.666 ± 0.023
4.23 ± 0.033
3.799 ± 0.021
4.442 ± 0.033
4.32 ± 0.036
7.218 ± 0.039
5.435 ± 0.05
6.645 ± 0.031
1.192 ± 0.014
3.08 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here