Ustilaginoidea virens RNA virus M

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; Victorivirus; unclassified Victorivirus

Average proteome isoelectric point is 5.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A097I5B9|A0A097I5B9_9VIRU RNA-directed RNA polymerase OS=Ustilaginoidea virens RNA virus M OX=1561172 PE=4 SV=1
MM1 pKa = 7.47SEE3 pKa = 4.27YY4 pKa = 10.56VPPSIEE10 pKa = 4.74DD11 pKa = 3.34LWKK14 pKa = 10.12HH15 pKa = 5.04LQGFGANPIALRR27 pKa = 11.84DD28 pKa = 4.18HH29 pKa = 6.0ITVPVTEE36 pKa = 4.62MLSEE40 pKa = 4.5LRR42 pKa = 11.84GLDD45 pKa = 3.38LGRR48 pKa = 11.84GRR50 pKa = 11.84IAGWLEE56 pKa = 3.62PEE58 pKa = 4.25NILRR62 pKa = 11.84VEE64 pKa = 4.51VPAATSPGIRR74 pKa = 11.84WKK76 pKa = 10.87KK77 pKa = 10.21LGYY80 pKa = 7.89KK81 pKa = 8.13TKK83 pKa = 10.39RR84 pKa = 11.84DD85 pKa = 3.57AMLQAAVEE93 pKa = 3.96ARR95 pKa = 11.84GNIVRR100 pKa = 11.84MRR102 pKa = 11.84DD103 pKa = 3.05VGGGYY108 pKa = 8.53EE109 pKa = 4.06VPPCGVAGRR118 pKa = 11.84GKK120 pKa = 10.03RR121 pKa = 11.84VPIDD125 pKa = 3.41RR126 pKa = 11.84PSDD129 pKa = 3.62GEE131 pKa = 4.0RR132 pKa = 11.84KK133 pKa = 8.69EE134 pKa = 3.95GRR136 pKa = 11.84FIVMPDD142 pKa = 3.48LVRR145 pKa = 11.84HH146 pKa = 5.6LMGMIAVQPLMKK158 pKa = 10.1KK159 pKa = 10.09IKK161 pKa = 10.22QADD164 pKa = 3.56KK165 pKa = 11.3SNGGVMLGMGPFGGSYY181 pKa = 10.83DD182 pKa = 3.66RR183 pKa = 11.84LAEE186 pKa = 4.01YY187 pKa = 10.84ASGGKK192 pKa = 10.05AYY194 pKa = 10.86LCIDD198 pKa = 4.32FKK200 pKa = 11.46KK201 pKa = 10.48FDD203 pKa = 3.52QSVPRR208 pKa = 11.84SVLRR212 pKa = 11.84AVMQRR217 pKa = 11.84VRR219 pKa = 11.84EE220 pKa = 4.05EE221 pKa = 3.77FDD223 pKa = 3.38EE224 pKa = 4.82EE225 pKa = 4.26EE226 pKa = 4.81GSDD229 pKa = 4.05GYY231 pKa = 10.05WRR233 pKa = 11.84SEE235 pKa = 3.8FKK237 pKa = 10.88QLVDD241 pKa = 4.03TEE243 pKa = 4.31VAMPDD248 pKa = 2.59GHH250 pKa = 6.59TYY252 pKa = 10.81AKK254 pKa = 10.18RR255 pKa = 11.84AGVSSGDD262 pKa = 3.16PWTSIVGSVANWLVLRR278 pKa = 11.84IALKK282 pKa = 10.64RR283 pKa = 11.84LGVDD287 pKa = 3.08ARR289 pKa = 11.84IWTFGDD295 pKa = 3.46DD296 pKa = 3.39SLIAVDD302 pKa = 3.82TDD304 pKa = 3.77VPSEE308 pKa = 4.07SWLLEE313 pKa = 3.71AVARR317 pKa = 11.84EE318 pKa = 4.09LKK320 pKa = 10.53SVFGMTVSKK329 pKa = 10.08EE330 pKa = 3.6KK331 pKa = 10.84SIATRR336 pKa = 11.84HH337 pKa = 4.88LVGVFEE343 pKa = 4.35EE344 pKa = 4.87PEE346 pKa = 4.02VGQTANFLSAYY357 pKa = 9.41FLQTGTSVVPVRR369 pKa = 11.84PIQDD373 pKa = 3.45LHH375 pKa = 8.27EE376 pKa = 4.67LMLVPEE382 pKa = 4.22RR383 pKa = 11.84RR384 pKa = 11.84KK385 pKa = 9.72DD386 pKa = 3.78TVWWEE391 pKa = 4.0VARR394 pKa = 11.84TAMAYY399 pKa = 10.38LVFFWNDD406 pKa = 3.02SARR409 pKa = 11.84MTLEE413 pKa = 3.89WYY415 pKa = 9.27WDD417 pKa = 3.77FLHH420 pKa = 7.19RR421 pKa = 11.84EE422 pKa = 3.94YY423 pKa = 10.64EE424 pKa = 4.24IPQLRR429 pKa = 11.84GDD431 pKa = 3.94PEE433 pKa = 3.95ILGMLRR439 pKa = 11.84LMDD442 pKa = 4.95LPWDD446 pKa = 3.64QFKK449 pKa = 11.25EE450 pKa = 3.89EE451 pKa = 3.91WLIRR455 pKa = 11.84LPYY458 pKa = 9.68RR459 pKa = 11.84YY460 pKa = 9.16EE461 pKa = 3.85VEE463 pKa = 4.03LLYY466 pKa = 11.18SHH468 pKa = 7.32GYY470 pKa = 5.68TTFFPPALWALTYY483 pKa = 10.21KK484 pKa = 10.84DD485 pKa = 4.76HH486 pKa = 7.28VPLDD490 pKa = 4.11GGNKK494 pKa = 8.64VWWEE498 pKa = 4.0LEE500 pKa = 4.14GQQ502 pKa = 3.54

Molecular weight: 57.1 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A097I5B9|A0A097I5B9_9VIRU RNA-directed RNA polymerase OS=Ustilaginoidea virens RNA virus M OX=1561172 PE=4 SV=1
MM1 pKa = 7.47SEE3 pKa = 4.27YY4 pKa = 10.56VPPSIEE10 pKa = 4.74DD11 pKa = 3.34LWKK14 pKa = 10.12HH15 pKa = 5.04LQGFGANPIALRR27 pKa = 11.84DD28 pKa = 4.18HH29 pKa = 6.0ITVPVTEE36 pKa = 4.62MLSEE40 pKa = 4.5LRR42 pKa = 11.84GLDD45 pKa = 3.38LGRR48 pKa = 11.84GRR50 pKa = 11.84IAGWLEE56 pKa = 3.62PEE58 pKa = 4.25NILRR62 pKa = 11.84VEE64 pKa = 4.51VPAATSPGIRR74 pKa = 11.84WKK76 pKa = 10.87KK77 pKa = 10.21LGYY80 pKa = 7.89KK81 pKa = 8.13TKK83 pKa = 10.39RR84 pKa = 11.84DD85 pKa = 3.57AMLQAAVEE93 pKa = 3.96ARR95 pKa = 11.84GNIVRR100 pKa = 11.84MRR102 pKa = 11.84DD103 pKa = 3.05VGGGYY108 pKa = 8.53EE109 pKa = 4.06VPPCGVAGRR118 pKa = 11.84GKK120 pKa = 10.03RR121 pKa = 11.84VPIDD125 pKa = 3.41RR126 pKa = 11.84PSDD129 pKa = 3.62GEE131 pKa = 4.0RR132 pKa = 11.84KK133 pKa = 8.69EE134 pKa = 3.95GRR136 pKa = 11.84FIVMPDD142 pKa = 3.48LVRR145 pKa = 11.84HH146 pKa = 5.6LMGMIAVQPLMKK158 pKa = 10.1KK159 pKa = 10.09IKK161 pKa = 10.22QADD164 pKa = 3.56KK165 pKa = 11.3SNGGVMLGMGPFGGSYY181 pKa = 10.83DD182 pKa = 3.66RR183 pKa = 11.84LAEE186 pKa = 4.01YY187 pKa = 10.84ASGGKK192 pKa = 10.05AYY194 pKa = 10.86LCIDD198 pKa = 4.32FKK200 pKa = 11.46KK201 pKa = 10.48FDD203 pKa = 3.52QSVPRR208 pKa = 11.84SVLRR212 pKa = 11.84AVMQRR217 pKa = 11.84VRR219 pKa = 11.84EE220 pKa = 4.05EE221 pKa = 3.77FDD223 pKa = 3.38EE224 pKa = 4.82EE225 pKa = 4.26EE226 pKa = 4.81GSDD229 pKa = 4.05GYY231 pKa = 10.05WRR233 pKa = 11.84SEE235 pKa = 3.8FKK237 pKa = 10.88QLVDD241 pKa = 4.03TEE243 pKa = 4.31VAMPDD248 pKa = 2.59GHH250 pKa = 6.59TYY252 pKa = 10.81AKK254 pKa = 10.18RR255 pKa = 11.84AGVSSGDD262 pKa = 3.16PWTSIVGSVANWLVLRR278 pKa = 11.84IALKK282 pKa = 10.64RR283 pKa = 11.84LGVDD287 pKa = 3.08ARR289 pKa = 11.84IWTFGDD295 pKa = 3.46DD296 pKa = 3.39SLIAVDD302 pKa = 3.82TDD304 pKa = 3.77VPSEE308 pKa = 4.07SWLLEE313 pKa = 3.71AVARR317 pKa = 11.84EE318 pKa = 4.09LKK320 pKa = 10.53SVFGMTVSKK329 pKa = 10.08EE330 pKa = 3.6KK331 pKa = 10.84SIATRR336 pKa = 11.84HH337 pKa = 4.88LVGVFEE343 pKa = 4.35EE344 pKa = 4.87PEE346 pKa = 4.02VGQTANFLSAYY357 pKa = 9.41FLQTGTSVVPVRR369 pKa = 11.84PIQDD373 pKa = 3.45LHH375 pKa = 8.27EE376 pKa = 4.67LMLVPEE382 pKa = 4.22RR383 pKa = 11.84RR384 pKa = 11.84KK385 pKa = 9.72DD386 pKa = 3.78TVWWEE391 pKa = 4.0VARR394 pKa = 11.84TAMAYY399 pKa = 10.38LVFFWNDD406 pKa = 3.02SARR409 pKa = 11.84MTLEE413 pKa = 3.89WYY415 pKa = 9.27WDD417 pKa = 3.77FLHH420 pKa = 7.19RR421 pKa = 11.84EE422 pKa = 3.94YY423 pKa = 10.64EE424 pKa = 4.24IPQLRR429 pKa = 11.84GDD431 pKa = 3.94PEE433 pKa = 3.95ILGMLRR439 pKa = 11.84LMDD442 pKa = 4.95LPWDD446 pKa = 3.64QFKK449 pKa = 11.25EE450 pKa = 3.89EE451 pKa = 3.91WLIRR455 pKa = 11.84LPYY458 pKa = 9.68RR459 pKa = 11.84YY460 pKa = 9.16EE461 pKa = 3.85VEE463 pKa = 4.03LLYY466 pKa = 11.18SHH468 pKa = 7.32GYY470 pKa = 5.68TTFFPPALWALTYY483 pKa = 10.21KK484 pKa = 10.84DD485 pKa = 4.76HH486 pKa = 7.28VPLDD490 pKa = 4.11GGNKK494 pKa = 8.64VWWEE498 pKa = 4.0LEE500 pKa = 4.14GQQ502 pKa = 3.54

Molecular weight: 57.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

502

502

502

502.0

57.1

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.773 ± 0.0

0.398 ± 0.0

6.175 ± 0.0

7.769 ± 0.0

3.586 ± 0.0

8.765 ± 0.0

1.793 ± 0.0

4.183 ± 0.0

4.781 ± 0.0

9.761 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.586 ± 0.0

1.594 ± 0.0

5.777 ± 0.0

2.59 ± 0.0

7.57 ± 0.0

5.179 ± 0.0

3.984 ± 0.0

8.765 ± 0.0

3.586 ± 0.0

3.386 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski