Salana multivorans

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Beutenbergiaceae; Salana

Average proteome isoelectric point is 5.9

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3332 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3N2DBE7|A0A3N2DBE7_9MICO Exoribonuclease R OS=Salana multivorans OX=120377 GN=EDD28_1712 PE=4 SV=1
MM1 pKa = 7.23RR2 pKa = 11.84TSSSRR7 pKa = 11.84VLAAIVALGVCLGLTACVPGLIDD30 pKa = 4.5PFAGGNGSSTDD41 pKa = 3.66PSDD44 pKa = 5.55ADD46 pKa = 3.95DD47 pKa = 4.11TTDD50 pKa = 4.56PDD52 pKa = 4.39DD53 pKa = 4.87PSDD56 pKa = 3.53AAEE59 pKa = 4.46APVVLDD65 pKa = 4.65PGPSSTAIDD74 pKa = 3.72WRR76 pKa = 11.84PCDD79 pKa = 3.11HH80 pKa = 7.22HH81 pKa = 8.52ARR83 pKa = 11.84FDD85 pKa = 3.85CAEE88 pKa = 3.86VLLPLDD94 pKa = 4.13HH95 pKa = 7.51ADD97 pKa = 3.59PGGDD101 pKa = 3.13QVRR104 pKa = 11.84IALRR108 pKa = 11.84RR109 pKa = 11.84LPAGGPEE116 pKa = 3.96EE117 pKa = 4.44EE118 pKa = 4.49RR119 pKa = 11.84LGTLWINPGGPGEE132 pKa = 4.19SGIDD136 pKa = 3.62LVTMVGSFFGDD147 pKa = 3.53DD148 pKa = 3.14LLEE151 pKa = 5.2RR152 pKa = 11.84YY153 pKa = 9.68DD154 pKa = 3.93VVGFDD159 pKa = 3.76PRR161 pKa = 11.84GVGASTHH168 pKa = 5.09VVCLLDD174 pKa = 5.63GEE176 pKa = 5.57DD177 pKa = 3.78DD178 pKa = 4.39PSWVDD183 pKa = 4.98LDD185 pKa = 4.61LDD187 pKa = 4.14TPKK190 pKa = 11.09GLARR194 pKa = 11.84VEE196 pKa = 4.48SGFTALGEE204 pKa = 4.21LCRR207 pKa = 11.84EE208 pKa = 3.87RR209 pKa = 11.84SGALLDD215 pKa = 4.08HH216 pKa = 6.92VSTADD221 pKa = 3.4TVADD225 pKa = 4.46LEE227 pKa = 4.31ALRR230 pKa = 11.84ALTGEE235 pKa = 3.88QLNYY239 pKa = 10.54LGYY242 pKa = 10.64SYY244 pKa = 10.14GTLIGAVYY252 pKa = 10.84ADD254 pKa = 4.56TYY256 pKa = 9.17PEE258 pKa = 3.84RR259 pKa = 11.84VGRR262 pKa = 11.84MVLDD266 pKa = 4.0GAIDD270 pKa = 3.85PSVGYY275 pKa = 9.06TDD277 pKa = 5.48LQAQQTWTFQRR288 pKa = 11.84AFARR292 pKa = 11.84FVTTCRR298 pKa = 11.84EE299 pKa = 4.07DD300 pKa = 3.56ADD302 pKa = 4.62CPLDD306 pKa = 4.12ADD308 pKa = 3.8PRR310 pKa = 11.84AAEE313 pKa = 4.18TQVLDD318 pKa = 4.47WIDD321 pKa = 3.92EE322 pKa = 4.38LDD324 pKa = 3.85VSPVPSDD331 pKa = 4.02AEE333 pKa = 4.4DD334 pKa = 4.46GEE336 pKa = 4.58LTGQEE341 pKa = 4.14LVAALASALYY351 pKa = 10.34APWDD355 pKa = 3.4WDD357 pKa = 3.88VVVEE361 pKa = 4.39DD362 pKa = 4.83LADD365 pKa = 3.61AVADD369 pKa = 3.89SDD371 pKa = 4.44PDD373 pKa = 3.89GSALDD378 pKa = 3.82EE379 pKa = 4.98LQGEE383 pKa = 4.84WYY385 pKa = 10.34GGALNYY391 pKa = 9.11PFWFSAIDD399 pKa = 3.75CVDD402 pKa = 3.73YY403 pKa = 10.76PVGTFDD409 pKa = 4.67EE410 pKa = 5.0AVTHH414 pKa = 5.78ARR416 pKa = 11.84EE417 pKa = 3.95LAAGSPVFGAGSIAEE432 pKa = 4.36IQCATWPAKK441 pKa = 10.62ARR443 pKa = 11.84DD444 pKa = 3.55EE445 pKa = 4.12RR446 pKa = 11.84VPVSGTGAAPILVVGTLFDD465 pKa = 4.24PATPYY470 pKa = 10.95AWAVSLSRR478 pKa = 11.84QLEE481 pKa = 4.37SATLLTYY488 pKa = 10.61EE489 pKa = 4.56GDD491 pKa = 3.17GHH493 pKa = 6.92AVYY496 pKa = 10.36GGVSWCVDD504 pKa = 3.32GFVEE508 pKa = 6.25DD509 pKa = 4.1YY510 pKa = 10.88LIDD513 pKa = 4.13GAVPPPGMSCPSAFF527 pKa = 3.76

Molecular weight: 55.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3N2D223|A0A3N2D223_9MICO 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Salana multivorans OX=120377 GN=hisA PE=3 SV=1
MM1 pKa = 6.12VTSVLVVPTTTGRR14 pKa = 11.84RR15 pKa = 11.84VARR18 pKa = 11.84VTVPRR23 pKa = 11.84VPTTTVRR30 pKa = 11.84SVRR33 pKa = 11.84TRR35 pKa = 11.84SAVRR39 pKa = 11.84VVTVLTVRR47 pKa = 11.84SVPTRR52 pKa = 11.84TVVLAARR59 pKa = 11.84VTVPRR64 pKa = 11.84VPTTTVRR71 pKa = 11.84SVRR74 pKa = 11.84TRR76 pKa = 11.84TVVRR80 pKa = 11.84VVTVLTVRR88 pKa = 11.84SVPTRR93 pKa = 11.84TVVLAARR100 pKa = 11.84VTGPRR105 pKa = 11.84VPTTTVRR112 pKa = 11.84SVRR115 pKa = 11.84TRR117 pKa = 11.84TVVRR121 pKa = 11.84VVTVLTVRR129 pKa = 11.84SVPTTTAVPVARR141 pKa = 11.84VTGPRR146 pKa = 11.84VPTTTVRR153 pKa = 11.84SVRR156 pKa = 11.84TRR158 pKa = 11.84TVVRR162 pKa = 11.84AARR165 pKa = 11.84VTGPRR170 pKa = 11.84VPTTTGPSVRR180 pKa = 11.84TRR182 pKa = 11.84TAVRR186 pKa = 11.84VATVLTGPRR195 pKa = 11.84VPTTTAVRR203 pKa = 11.84AVRR206 pKa = 11.84AKK208 pKa = 9.27TGRR211 pKa = 11.84AARR214 pKa = 11.84TVMTAPSVPMRR225 pKa = 11.84TVARR229 pKa = 11.84VATVTSVPVVLTTTGPSVPTRR250 pKa = 11.84TVVRR254 pKa = 11.84VVRR257 pKa = 11.84ASVPRR262 pKa = 11.84VPMVMTVRR270 pKa = 11.84VARR273 pKa = 11.84TATTVVRR280 pKa = 11.84VVTVLTDD287 pKa = 3.56PRR289 pKa = 11.84APTVMTVRR297 pKa = 11.84SVPTTTAALVVTVTSVPVVPTVMTVRR323 pKa = 11.84SVRR326 pKa = 11.84TRR328 pKa = 11.84SAALVVRR335 pKa = 11.84VSGPHH340 pKa = 5.77VPTAMIVRR348 pKa = 11.84SVLTTTAARR357 pKa = 11.84VAAVTSAPVVRR368 pKa = 11.84TATTVRR374 pKa = 11.84SVPTTTAAHH383 pKa = 5.98VVTAMIVRR391 pKa = 11.84VAPTATTGGLAVTATTAAGARR412 pKa = 11.84PTRR415 pKa = 11.84ARR417 pKa = 11.84LVRR420 pKa = 11.84STSGVARR427 pKa = 11.84TATSARR433 pKa = 11.84ARR435 pKa = 11.84TVAPSASTTRR445 pKa = 11.84SSPRR449 pKa = 11.84RR450 pKa = 11.84SSSRR454 pKa = 11.84CSRR457 pKa = 11.84ARR459 pKa = 11.84LARR462 pKa = 11.84RR463 pKa = 11.84CAAA466 pKa = 4.02

Molecular weight: 48.82 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3332

0

3332

1173099

30

3301

352.1

37.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.021 ± 0.059

0.55 ± 0.011

6.482 ± 0.036

5.74 ± 0.038

2.533 ± 0.023

9.605 ± 0.044

1.896 ± 0.02

3.362 ± 0.027

1.299 ± 0.024

10.239 ± 0.048

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.584 ± 0.015

1.603 ± 0.022

6.039 ± 0.035

2.424 ± 0.022

7.722 ± 0.058

5.33 ± 0.031

6.385 ± 0.059

9.633 ± 0.041

1.644 ± 0.021

1.91 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski