Myotis ricketti papillomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Treisiotapapillomavirus; Treisiotapapillomavirus 1

Average proteome isoelectric point is 6.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|I3VR47|I3VR47_9PAPI Regulatory protein E2 OS=Myotis ricketti papillomavirus 1 OX=1195370 GN=E2 PE=3 SV=1
MM1 pKa = 7.75ANPPGNNGGTGCIYY15 pKa = 10.87LLDD18 pKa = 4.2EE19 pKa = 5.06AEE21 pKa = 4.74CDD23 pKa = 4.14DD24 pKa = 4.4GSSDD28 pKa = 3.49EE29 pKa = 4.94DD30 pKa = 3.75EE31 pKa = 4.72EE32 pKa = 4.45EE33 pKa = 4.46EE34 pKa = 5.06EE35 pKa = 4.38VGEE38 pKa = 4.93DD39 pKa = 3.86CVDD42 pKa = 4.81DD43 pKa = 4.12AACYY47 pKa = 9.56QGNTIALFVAQEE59 pKa = 3.84ASTDD63 pKa = 3.52EE64 pKa = 5.77AIIQSLKK71 pKa = 10.15RR72 pKa = 11.84KK73 pKa = 8.33YY74 pKa = 10.83VKK76 pKa = 9.83TPQQDD81 pKa = 3.47RR82 pKa = 11.84IRR84 pKa = 11.84EE85 pKa = 4.1IEE87 pKa = 4.06EE88 pKa = 4.21EE89 pKa = 3.65ISPRR93 pKa = 11.84LEE95 pKa = 4.6GIHH98 pKa = 7.0LEE100 pKa = 4.19THH102 pKa = 4.5SQKK105 pKa = 10.41VKK107 pKa = 10.72RR108 pKa = 11.84KK109 pKa = 9.71LFQANNAAKK118 pKa = 10.71GEE120 pKa = 4.16LDD122 pKa = 3.51VPLEE126 pKa = 4.3KK127 pKa = 10.44KK128 pKa = 10.31VATAGNLVEE137 pKa = 4.99VVAEE141 pKa = 4.33VHH143 pKa = 6.31CPPAGHH149 pKa = 7.46DD150 pKa = 3.5EE151 pKa = 4.62TVCSQKK157 pKa = 11.16SMEE160 pKa = 4.28GVEE163 pKa = 4.24EE164 pKa = 3.89QDD166 pKa = 4.13EE167 pKa = 5.09LGTCDD172 pKa = 3.15TGQEE176 pKa = 4.15AEE178 pKa = 4.29SALQNTEE185 pKa = 4.03PEE187 pKa = 4.28IEE189 pKa = 4.3CLSLEE194 pKa = 3.98ITEE197 pKa = 4.66PPVIPEE203 pKa = 4.19RR204 pKa = 11.84PWLDD208 pKa = 3.0GCTTEE213 pKa = 4.65QEE215 pKa = 3.88IAAAHH220 pKa = 6.15AKK222 pKa = 9.5AKK224 pKa = 10.38KK225 pKa = 9.45IAALKK230 pKa = 9.65LQEE233 pKa = 4.22KK234 pKa = 10.37AKK236 pKa = 11.04LPIQLLKK243 pKa = 9.86TGNRR247 pKa = 11.84KK248 pKa = 8.64AQILSHH254 pKa = 6.1CKK256 pKa = 8.48KK257 pKa = 8.91TFGISFIDD265 pKa = 3.11ITRR268 pKa = 11.84PFKK271 pKa = 11.0NDD273 pKa = 2.74NTVNEE278 pKa = 4.26TWVILSLYY286 pKa = 10.32LEE288 pKa = 4.58EE289 pKa = 4.52EE290 pKa = 4.34VADD293 pKa = 4.07ALLTVLEE300 pKa = 4.65PHH302 pKa = 6.91CKK304 pKa = 9.69CCFIISKK311 pKa = 10.27YY312 pKa = 10.53FGILKK317 pKa = 10.27SVLILIEE324 pKa = 4.03FQTAKK329 pKa = 10.32SRR331 pKa = 11.84KK332 pKa = 6.91TVLKK336 pKa = 10.81LMSSVMAVDD345 pKa = 4.17PEE347 pKa = 4.74AIIADD352 pKa = 3.97PPRR355 pKa = 11.84VRR357 pKa = 11.84SMPAALYY364 pKa = 7.98WYY366 pKa = 10.23KK367 pKa = 11.08VIAFEE372 pKa = 4.81KK373 pKa = 9.61AAQFGEE379 pKa = 4.13IPGWILTQVTLQHH392 pKa = 6.48SEE394 pKa = 3.96EE395 pKa = 4.52SEE397 pKa = 4.38LPFDD401 pKa = 4.98LSVMVQWAYY410 pKa = 11.31DD411 pKa = 3.45NDD413 pKa = 3.85YY414 pKa = 9.69DD415 pKa = 4.02TDD417 pKa = 3.88YY418 pKa = 11.47DD419 pKa = 4.03IAFEE423 pKa = 4.09YY424 pKa = 10.9AKK426 pKa = 10.75LATADD431 pKa = 3.57RR432 pKa = 11.84NARR435 pKa = 11.84AFLNSNCQAKK445 pKa = 9.54YY446 pKa = 11.01VKK448 pKa = 10.23DD449 pKa = 3.8CQTMVRR455 pKa = 11.84LYY457 pKa = 10.67RR458 pKa = 11.84KK459 pKa = 9.58AQMHH463 pKa = 5.98RR464 pKa = 11.84MSMGAWIKK472 pKa = 10.37EE473 pKa = 3.96RR474 pKa = 11.84SDD476 pKa = 4.72KK477 pKa = 10.78IDD479 pKa = 3.6GDD481 pKa = 4.02GDD483 pKa = 3.23WRR485 pKa = 11.84IIVHH489 pKa = 5.88FLRR492 pKa = 11.84YY493 pKa = 9.59QEE495 pKa = 4.29VEE497 pKa = 4.21FVSFMVKK504 pKa = 10.46FKK506 pKa = 11.11LFLKK510 pKa = 7.95GTPKK514 pKa = 10.42KK515 pKa = 10.59NCLLFYY521 pKa = 10.61GPPNTGKK528 pKa = 10.3SAFCMSLIKK537 pKa = 10.37FFAGRR542 pKa = 11.84VVSFMNARR550 pKa = 11.84SHH552 pKa = 7.32FWLQPLADD560 pKa = 4.26CRR562 pKa = 11.84VGLLDD567 pKa = 5.71DD568 pKa = 4.59ATDD571 pKa = 3.8ACWDD575 pKa = 3.74YY576 pKa = 11.46VDD578 pKa = 4.08TYY580 pKa = 10.47MRR582 pKa = 11.84SAFDD586 pKa = 3.57GNEE589 pKa = 3.25ISLDD593 pKa = 4.03CKK595 pKa = 10.61HH596 pKa = 6.61KK597 pKa = 11.14APIQLKK603 pKa = 10.0CPPLLVTSNTNILTSDD619 pKa = 2.78RR620 pKa = 11.84WKK622 pKa = 10.15YY623 pKa = 8.81LHH625 pKa = 7.03SRR627 pKa = 11.84VTVVKK632 pKa = 9.9FMNPFPLTQDD642 pKa = 3.07GQPRR646 pKa = 11.84YY647 pKa = 10.38NFQPKK652 pKa = 9.24DD653 pKa = 3.17WKK655 pKa = 11.13SFLSRR660 pKa = 11.84LWARR664 pKa = 11.84LDD666 pKa = 3.47LSEE669 pKa = 4.9PEE671 pKa = 4.16EE672 pKa = 4.51DD673 pKa = 5.4EE674 pKa = 4.62EE675 pKa = 5.38DD676 pKa = 3.13EE677 pKa = 5.0GYY679 pKa = 11.16NGDD682 pKa = 3.57SQEE685 pKa = 4.43KK686 pKa = 8.63FRR688 pKa = 11.84CTIRR692 pKa = 11.84EE693 pKa = 3.96NDD695 pKa = 3.13EE696 pKa = 4.07HH697 pKa = 7.89LL698 pKa = 4.27

Molecular weight: 79.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|I3VR46|I3VR46_9PAPI Replication protein E1 OS=Myotis ricketti papillomavirus 1 OX=1195370 GN=E1 PE=3 SV=1
MM1 pKa = 7.27MIVVNYY7 pKa = 9.4YY8 pKa = 10.34DD9 pKa = 3.44KK10 pKa = 10.97KK11 pKa = 10.68GKK13 pKa = 9.28FRR15 pKa = 11.84RR16 pKa = 11.84DD17 pKa = 3.13RR18 pKa = 11.84SRR20 pKa = 11.84SQYY23 pKa = 10.64ISIRR27 pKa = 11.84PIRR30 pKa = 11.84GASMGSVTKK39 pKa = 10.76RR40 pKa = 11.84EE41 pKa = 4.15DD42 pKa = 3.13GEE44 pKa = 4.04YY45 pKa = 10.16RR46 pKa = 11.84PRR48 pKa = 11.84SLRR51 pKa = 11.84EE52 pKa = 3.62LMVDD56 pKa = 3.95MGLQYY61 pKa = 9.49QTILLSCVYY70 pKa = 10.04CSKK73 pKa = 9.72TLEE76 pKa = 4.03VSEE79 pKa = 5.0LVTFSVKK86 pKa = 10.31DD87 pKa = 3.39LQIIWRR93 pKa = 11.84GGFPYY98 pKa = 10.25GVCAFCLEE106 pKa = 4.46FNLQIQYY113 pKa = 10.19LRR115 pKa = 11.84HH116 pKa = 5.75HH117 pKa = 6.81RR118 pKa = 11.84RR119 pKa = 11.84SASIKK124 pKa = 8.35TVEE127 pKa = 4.58EE128 pKa = 3.83EE129 pKa = 4.0LQRR132 pKa = 11.84PVGNLNLRR140 pKa = 11.84CFVCAIKK147 pKa = 10.55LHH149 pKa = 5.45STDD152 pKa = 3.41YY153 pKa = 10.58ATMEE157 pKa = 4.05EE158 pKa = 3.93QGLNLKK164 pKa = 10.09YY165 pKa = 10.25IAGQWRR171 pKa = 11.84GKK173 pKa = 10.83CMICIGAVEE182 pKa = 4.43GVV184 pKa = 3.21

Molecular weight: 21.27 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

2174

184

698

434.8

48.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.808 ± 0.558

2.162 ± 0.48

5.888 ± 0.448

6.348 ± 0.917

4.232 ± 0.492

6.118 ± 0.643

2.024 ± 0.099

5.152 ± 0.482

5.566 ± 0.629

8.05 ± 0.331

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.07 ± 0.32

3.588 ± 0.416

6.348 ± 0.861

4.324 ± 0.316

5.888 ± 0.582

7.498 ± 0.738

6.946 ± 0.787

5.934 ± 0.261

1.334 ± 0.321

3.726 ± 0.33
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski