Beihai sobemo-like virus 5

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.59

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1L3KEA0|A0A1L3KEA0_9VIRU RNA-directed RNA polymerase OS=Beihai sobemo-like virus 5 OX=1922702 PE=4 SV=1
MM1 pKa = 7.69ALLLSRR7 pKa = 11.84VQGADD12 pKa = 2.94TKK14 pKa = 10.84AVKK17 pKa = 10.29KK18 pKa = 10.57VVTSFGLEE26 pKa = 3.66PGAARR31 pKa = 11.84AYY33 pKa = 10.56LHH35 pKa = 6.84LGLLFGIYY43 pKa = 10.29KK44 pKa = 9.2LVCARR49 pKa = 11.84KK50 pKa = 8.91EE51 pKa = 3.91LCPPIARR58 pKa = 11.84ACLRR62 pKa = 11.84VLYY65 pKa = 9.55YY66 pKa = 9.36VVKK69 pKa = 9.48MSSPGVSLVSWLKK82 pKa = 9.44EE83 pKa = 3.39RR84 pKa = 11.84LRR86 pKa = 11.84RR87 pKa = 11.84GRR89 pKa = 11.84IADD92 pKa = 4.0CVQGGPPTKK101 pKa = 9.9HH102 pKa = 6.8GYY104 pKa = 9.14FRR106 pKa = 11.84WNGKK110 pKa = 9.96DD111 pKa = 3.63FVRR114 pKa = 11.84HH115 pKa = 5.34SDD117 pKa = 3.34EE118 pKa = 4.49SISRR122 pKa = 11.84VKK124 pKa = 9.93MLRR127 pKa = 11.84GTTTIDD133 pKa = 3.02AYY135 pKa = 10.38GQEE138 pKa = 4.02STAYY142 pKa = 8.56NWEE145 pKa = 3.82ILEE148 pKa = 4.06PARR151 pKa = 11.84PKK153 pKa = 10.67DD154 pKa = 3.65LSPGEE159 pKa = 4.19SALEE163 pKa = 4.05GLSSNARR170 pKa = 11.84PSPLEE175 pKa = 4.0KK176 pKa = 10.6GHH178 pKa = 6.18VLVHH182 pKa = 6.97DD183 pKa = 5.18SILNLFSTGLVLNNILIMSRR203 pKa = 11.84HH204 pKa = 4.61KK205 pKa = 9.45TASLTHH211 pKa = 5.78LVVRR215 pKa = 11.84GTNTTAVAGRR225 pKa = 11.84QSGVRR230 pKa = 11.84ISLDD234 pKa = 2.85RR235 pKa = 11.84AYY237 pKa = 11.35YY238 pKa = 10.69LDD240 pKa = 5.66DD241 pKa = 4.41FGAPKK246 pKa = 9.53WDD248 pKa = 4.14EE249 pKa = 4.0KK250 pKa = 11.21RR251 pKa = 11.84HH252 pKa = 5.02TCTFLDD258 pKa = 4.92FMAIPLDD265 pKa = 3.63KK266 pKa = 11.3DD267 pKa = 4.02EE268 pKa = 5.66ISMIGVKK275 pKa = 8.74SLKK278 pKa = 10.83DD279 pKa = 3.21KK280 pKa = 11.08DD281 pKa = 3.11ITRR284 pKa = 11.84NYY286 pKa = 8.76EE287 pKa = 3.93LEE289 pKa = 4.5RR290 pKa = 11.84GTITYY295 pKa = 8.1ATDD298 pKa = 3.42DD299 pKa = 3.73FGNVVKK305 pKa = 10.74EE306 pKa = 4.04EE307 pKa = 4.15GSIPEE312 pKa = 4.36AEE314 pKa = 4.07LHH316 pKa = 5.42IHH318 pKa = 6.3NLGLALAHH326 pKa = 6.73IVSQPGASSSGVGVVQNGYY345 pKa = 10.03KK346 pKa = 10.21LAGMWLGQPAHH357 pKa = 6.15SLKK360 pKa = 10.27KK361 pKa = 10.16HH362 pKa = 5.84RR363 pKa = 11.84GKK365 pKa = 10.97ANLFMHH371 pKa = 7.04TDD373 pKa = 3.69AIMANLEE380 pKa = 3.85QMGLYY385 pKa = 9.37KK386 pKa = 10.56HH387 pKa = 6.28PLIEE391 pKa = 6.31RR392 pKa = 11.84IQQWSDD398 pKa = 2.92SLQTPTSLPEE408 pKa = 3.91APGEE412 pKa = 4.07SRR414 pKa = 11.84EE415 pKa = 4.34SKK417 pKa = 10.43KK418 pKa = 10.46EE419 pKa = 3.32RR420 pKa = 11.84AARR423 pKa = 11.84KK424 pKa = 7.77WFEE427 pKa = 3.87YY428 pKa = 8.17YY429 pKa = 9.75QEE431 pKa = 4.58YY432 pKa = 10.6KK433 pKa = 10.75DD434 pKa = 3.9EE435 pKa = 4.89PYY437 pKa = 11.02EE438 pKa = 4.27AMEE441 pKa = 4.15EE442 pKa = 4.2DD443 pKa = 3.89EE444 pKa = 4.35EE445 pKa = 4.4EE446 pKa = 4.49EE447 pKa = 4.29YY448 pKa = 11.16EE449 pKa = 4.24KK450 pKa = 11.23VYY452 pKa = 10.72GRR454 pKa = 11.84SGHH457 pKa = 6.78ARR459 pKa = 11.84TQPAVALPKK468 pKa = 10.39AVAAPGPRR476 pKa = 11.84IPPRR480 pKa = 11.84ARR482 pKa = 11.84HH483 pKa = 5.84PGEE486 pKa = 4.12SAAEE490 pKa = 3.82RR491 pKa = 11.84ALEE494 pKa = 3.81ITRR497 pKa = 11.84QNMLLDD503 pKa = 3.34IDD505 pKa = 4.98RR506 pKa = 11.84NVKK509 pKa = 8.06SWKK512 pKa = 10.05YY513 pKa = 10.61GILHH517 pKa = 6.41EE518 pKa = 4.31EE519 pKa = 4.06APRR522 pKa = 11.84VLRR525 pKa = 11.84EE526 pKa = 3.25ISYY529 pKa = 10.23YY530 pKa = 10.32RR531 pKa = 11.84EE532 pKa = 3.58EE533 pKa = 3.82ATADD537 pKa = 3.06VRR539 pKa = 11.84EE540 pKa = 4.07RR541 pKa = 11.84LKK543 pKa = 11.14AVLATPSNALLRR555 pKa = 11.84DD556 pKa = 3.65YY557 pKa = 9.51MKK559 pKa = 10.36KK560 pKa = 10.21VSPMWSPGEE569 pKa = 3.92EE570 pKa = 4.2GEE572 pKa = 5.09EE573 pKa = 3.86ILDD576 pKa = 3.94RR577 pKa = 11.84DD578 pKa = 3.65GNPYY582 pKa = 9.25FRR584 pKa = 11.84RR585 pKa = 11.84VGSYY589 pKa = 10.63EE590 pKa = 3.62PTRR593 pKa = 11.84TAKK596 pKa = 9.76AKK598 pKa = 10.15KK599 pKa = 9.36YY600 pKa = 10.2RR601 pKa = 11.84EE602 pKa = 4.22EE603 pKa = 3.89EE604 pKa = 3.56TDD606 pKa = 3.25LQKK609 pKa = 11.0RR610 pKa = 11.84LRR612 pKa = 11.84EE613 pKa = 3.93LANRR617 pKa = 11.84YY618 pKa = 8.81YY619 pKa = 11.07ADD621 pKa = 4.24KK622 pKa = 11.28LHH624 pKa = 6.21GCKK627 pKa = 9.88KK628 pKa = 10.0GEE630 pKa = 3.82YY631 pKa = 9.57RR632 pKa = 11.84IPTSSKK638 pKa = 10.48KK639 pKa = 10.85NIDD642 pKa = 3.6RR643 pKa = 11.84SLKK646 pKa = 9.86AQAALAVAGPPQLTSEE662 pKa = 4.1QEE664 pKa = 4.23EE665 pKa = 4.32EE666 pKa = 4.04FEE668 pKa = 4.02AAVRR672 pKa = 11.84LVRR675 pKa = 11.84EE676 pKa = 4.32KK677 pKa = 10.87YY678 pKa = 9.57KK679 pKa = 11.02AGIGDD684 pKa = 4.19EE685 pKa = 4.45PIKK688 pKa = 10.2TYY690 pKa = 10.92LEE692 pKa = 4.13EE693 pKa = 5.78GDD695 pKa = 3.83YY696 pKa = 11.64GFLKK700 pKa = 10.14TFLGFEE706 pKa = 4.53DD707 pKa = 4.05KK708 pKa = 11.14SSGVSARR715 pKa = 11.84FRR717 pKa = 11.84NMKK720 pKa = 8.88KK721 pKa = 9.9AAWVKK726 pKa = 9.05AHH728 pKa = 6.82PEE730 pKa = 4.04EE731 pKa = 4.65VVDD734 pKa = 4.61LALSRR739 pKa = 11.84LILIAVAGDD748 pKa = 3.4QLKK751 pKa = 10.75DD752 pKa = 3.46LNAIEE757 pKa = 5.11LIQYY761 pKa = 9.38GCADD765 pKa = 3.47VKK767 pKa = 11.17DD768 pKa = 3.9IFMKK772 pKa = 10.63PEE774 pKa = 3.47EE775 pKa = 4.68HH776 pKa = 6.58SPQKK780 pKa = 9.89IAEE783 pKa = 4.11GRR785 pKa = 11.84FRR787 pKa = 11.84LIWISSLIDD796 pKa = 3.4LTVQALLHH804 pKa = 6.2KK805 pKa = 10.06ADD807 pKa = 3.91NAAHH811 pKa = 5.94VDD813 pKa = 3.84AYY815 pKa = 10.79QAGHH819 pKa = 6.38LTCAALGMGHH829 pKa = 6.05SPEE832 pKa = 4.33GLQHH836 pKa = 6.79LVRR839 pKa = 11.84AFEE842 pKa = 4.23RR843 pKa = 11.84EE844 pKa = 4.08GVAEE848 pKa = 4.29RR849 pKa = 11.84NVSSDD854 pKa = 2.72ASAFDD859 pKa = 3.97LSIDD863 pKa = 3.47GSFIHH868 pKa = 7.52ADD870 pKa = 3.44GEE872 pKa = 4.27RR873 pKa = 11.84RR874 pKa = 11.84ADD876 pKa = 3.3NCADD880 pKa = 3.62EE881 pKa = 5.26DD882 pKa = 3.87VARR885 pKa = 11.84LVKK888 pKa = 10.27RR889 pKa = 11.84YY890 pKa = 9.69AHH892 pKa = 6.77ILCSHH897 pKa = 6.47VLNNHH902 pKa = 5.23GEE904 pKa = 3.85VWLCLKK910 pKa = 10.95YY911 pKa = 10.76GVTSSGQLSTTTQNTFSRR929 pKa = 11.84SVMAAYY935 pKa = 9.63GGCLGWTCAGDD946 pKa = 4.29DD947 pKa = 4.41LVGDD951 pKa = 4.22EE952 pKa = 5.03NFDD955 pKa = 3.93HH956 pKa = 7.04NRR958 pKa = 11.84LLHH961 pKa = 5.79FGVRR965 pKa = 11.84SRR967 pKa = 11.84DD968 pKa = 3.52VEE970 pKa = 4.29LHH972 pKa = 5.49VGEE975 pKa = 5.35ADD977 pKa = 3.83FTSHH981 pKa = 8.15LINTSTATAAFGNVEE996 pKa = 3.74KK997 pKa = 10.25MLWHH1001 pKa = 7.25LYY1003 pKa = 7.6DD1004 pKa = 3.16TCTDD1008 pKa = 2.79VSTNRR1013 pKa = 11.84EE1014 pKa = 3.88RR1015 pKa = 11.84FGSSLYY1021 pKa = 10.26ILRR1024 pKa = 11.84DD1025 pKa = 3.6TPGVLEE1031 pKa = 5.08DD1032 pKa = 3.52VTAITNDD1039 pKa = 3.27FGINTDD1045 pKa = 3.41GYY1047 pKa = 9.35VAEE1050 pKa = 4.62SSLIRR1055 pKa = 11.84DD1056 pKa = 4.03LAA1058 pKa = 5.32

Molecular weight:
118.07 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1L3KEA0|A0A1L3KEA0_9VIRU RNA-directed RNA polymerase OS=Beihai sobemo-like virus 5 OX=1922702 PE=4 SV=1
MM1 pKa = 7.3VSPGKK6 pKa = 9.88RR7 pKa = 11.84VKK9 pKa = 9.85RR10 pKa = 11.84TIRR13 pKa = 11.84KK14 pKa = 8.73QKK16 pKa = 10.44AKK18 pKa = 10.34VIKK21 pKa = 10.38DD22 pKa = 3.31VTLLRR27 pKa = 11.84GIKK30 pKa = 9.65QGVGMVVKK38 pKa = 10.52RR39 pKa = 11.84PFGSAKK45 pKa = 9.9ARR47 pKa = 11.84PRR49 pKa = 11.84RR50 pKa = 11.84TANRR54 pKa = 11.84GRR56 pKa = 11.84NISKK60 pKa = 10.48KK61 pKa = 10.33AALCALTNAHH71 pKa = 6.62LPLPRR76 pKa = 11.84AVGAYY81 pKa = 8.15TVVKK85 pKa = 7.22TTTVIDD91 pKa = 3.75SASRR95 pKa = 11.84AMLFGTIKK103 pKa = 10.62GNRR106 pKa = 11.84SNHH109 pKa = 6.9PDD111 pKa = 3.57PAWYY115 pKa = 8.21DD116 pKa = 3.95TVAVTAGTSSTTAVGAADD134 pKa = 3.51NAKK137 pKa = 10.27FYY139 pKa = 11.07LDD141 pKa = 3.44TALASSGFASCRR153 pKa = 11.84LVPAAFTVQVMCPKK167 pKa = 10.39SLQTADD173 pKa = 3.76GIVYY177 pKa = 10.28IGRR180 pKa = 11.84CKK182 pKa = 10.12QVLDD186 pKa = 3.9LMGNTRR192 pKa = 11.84TWTTVMDD199 pKa = 4.62DD200 pKa = 3.66LVSYY204 pKa = 10.31SSPRR208 pKa = 11.84LCSAGKK214 pKa = 9.54LALRR218 pKa = 11.84GVKK221 pKa = 9.8VDD223 pKa = 5.31AIPNNMSQLSDD234 pKa = 3.67FCPRR238 pKa = 11.84AILTSSDD245 pKa = 3.34TNKK248 pKa = 8.09WTWGQGGVDD257 pKa = 3.32AQFEE261 pKa = 4.47GFAPIFVYY269 pKa = 10.67NKK271 pKa = 8.71NTVDD275 pKa = 3.58LQYY278 pKa = 11.29LVTVEE283 pKa = 3.4WRR285 pKa = 11.84VRR287 pKa = 11.84FDD289 pKa = 3.68PGNPAYY295 pKa = 10.13AGHH298 pKa = 6.56TFHH301 pKa = 7.23PVSSDD306 pKa = 3.62TCWSEE311 pKa = 3.83TLKK314 pKa = 11.07GMEE317 pKa = 4.18AEE319 pKa = 4.18GHH321 pKa = 5.7GVVDD325 pKa = 4.46LAEE328 pKa = 5.24GIADD332 pKa = 4.04FGDD335 pKa = 3.58AAMTAVGALLL345 pKa = 3.8

Molecular weight:
37.03 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1403

345

1058

701.5

77.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.979 ± 0.846

1.497 ± 0.279

5.845 ± 0.025

6.415 ± 2.447

2.922 ± 0.291

7.627 ± 0.408

2.851 ± 0.734

4.277 ± 0.418

5.916 ± 0.09

9.337 ± 1.094

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.996 ± 0.321

3.35 ± 0.219

4.205 ± 0.226

2.495 ± 0.06

6.771 ± 0.358

6.842 ± 0.092

5.845 ± 1.492

6.985 ± 1.351

1.426 ± 0.164

3.421 ± 0.577

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski