Dialister sp. CAG:357

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Negativicutes; Veillonellales; Veillonellaceae; Dialister; environmental samples

Average proteome isoelectric point is 6.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1809 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|R7CLP4|R7CLP4_9FIRM DNA repair protein RadC OS=Dialister sp. CAG:357 OX=1262869 GN=BN625_01024 PE=3 SV=1
MM1 pKa = 8.4DD2 pKa = 3.83ITNLQSDD9 pKa = 3.66MDD11 pKa = 4.09YY12 pKa = 11.42LFNCNFFDD20 pKa = 6.0DD21 pKa = 4.71SFDD24 pKa = 4.31PEE26 pKa = 4.26DD27 pKa = 5.18HH28 pKa = 7.33EE29 pKa = 4.8DD30 pKa = 3.66HH31 pKa = 7.16QDD33 pKa = 3.36FADD36 pKa = 4.75KK37 pKa = 10.92VLQSYY42 pKa = 9.79SWDD45 pKa = 3.53EE46 pKa = 3.57IYY48 pKa = 10.86GYY50 pKa = 9.04FFRR53 pKa = 11.84HH54 pKa = 5.66LTQDD58 pKa = 3.26CTTAEE63 pKa = 4.15SVYY66 pKa = 10.92NATNLYY72 pKa = 9.91FVYY75 pKa = 10.38CFDD78 pKa = 4.9KK79 pKa = 11.34NPVPNPYY86 pKa = 10.32EE87 pKa = 3.63LVGYY91 pKa = 9.1VLFRR95 pKa = 11.84IDD97 pKa = 4.54LDD99 pKa = 4.23KK100 pKa = 11.68YY101 pKa = 7.54WDD103 pKa = 3.79EE104 pKa = 4.48YY105 pKa = 11.74GDD107 pKa = 4.58FIDD110 pKa = 4.52SFAVSVLEE118 pKa = 4.01SSKK121 pKa = 10.71KK122 pKa = 9.63VSLMTDD128 pKa = 3.66PYY130 pKa = 9.1YY131 pKa = 11.13APWEE135 pKa = 4.17DD136 pKa = 3.34PKK138 pKa = 11.25VIKK141 pKa = 10.63QMEE144 pKa = 4.16KK145 pKa = 9.72WKK147 pKa = 10.56KK148 pKa = 8.65QLQNNEE154 pKa = 3.53SDD156 pKa = 3.27

Molecular weight: 18.69 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|R7CRX6|R7CRX6_9FIRM CitMHS domain-containing protein OS=Dialister sp. CAG:357 OX=1262869 GN=BN625_00197 PE=3 SV=1
MM1 pKa = 7.7AKK3 pKa = 7.99MTFQPNNHH11 pKa = 5.63WRR13 pKa = 11.84KK14 pKa = 6.87QTHH17 pKa = 5.61GFRR20 pKa = 11.84ARR22 pKa = 11.84MKK24 pKa = 8.64TKK26 pKa = 10.33AGRR29 pKa = 11.84IVLKK33 pKa = 10.36RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84AKK38 pKa = 9.89GRR40 pKa = 11.84KK41 pKa = 8.67VLSAA45 pKa = 4.05

Molecular weight: 5.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1809

0

1809

544003

30

2013

300.7

33.39

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.626 ± 0.068

1.189 ± 0.021

5.888 ± 0.059

6.963 ± 0.052

4.16 ± 0.044

7.732 ± 0.069

2.145 ± 0.032

7.04 ± 0.043

6.526 ± 0.056

9.058 ± 0.057

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.134 ± 0.033

3.702 ± 0.04

3.907 ± 0.04

2.749 ± 0.035

4.782 ± 0.055

5.829 ± 0.057

5.261 ± 0.055

6.859 ± 0.046

0.967 ± 0.022

3.48 ± 0.036
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski