Amino acid dipepetide frequency for Hubei tombus-like virus 37

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
5.594AlaAla: 5.594 ± 0.0
0.622AlaCys: 0.622 ± 0.0
6.215AlaAsp: 6.215 ± 0.0
7.458AlaGlu: 7.458 ± 0.0
4.351AlaPhe: 4.351 ± 0.0
4.972AlaGly: 4.972 ± 0.0
0.0AlaHis: 0.0 ± 0.0
4.972AlaIle: 4.972 ± 0.0
5.594AlaLys: 5.594 ± 0.0
6.837AlaLeu: 6.837 ± 0.0
3.729AlaMet: 3.729 ± 0.0
0.622AlaAsn: 0.622 ± 0.0
4.972AlaPro: 4.972 ± 0.0
1.865AlaGln: 1.865 ± 0.0
2.486AlaArg: 2.486 ± 0.0
7.458AlaSer: 7.458 ± 0.0
4.972AlaThr: 4.972 ± 0.0
3.729AlaVal: 3.729 ± 0.0
0.0AlaTrp: 0.0 ± 0.0
4.351AlaTyr: 4.351 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
3.108CysAsp: 3.108 ± 0.0
0.622CysGlu: 0.622 ± 0.0
0.0CysPhe: 0.0 ± 0.0
1.243CysGly: 1.243 ± 0.0
0.622CysHis: 0.622 ± 0.0
0.622CysIle: 0.622 ± 0.0
0.0CysLys: 0.0 ± 0.0
1.243CysLeu: 1.243 ± 0.0
0.622CysMet: 0.622 ± 0.0
0.622CysAsn: 0.622 ± 0.0
1.865CysPro: 1.865 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.622CysArg: 0.622 ± 0.0
2.486CysSer: 2.486 ± 0.0
0.0CysThr: 0.0 ± 0.0
1.243CysVal: 1.243 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.622CysTyr: 0.622 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
7.458AspAla: 7.458 ± 0.0
0.0AspCys: 0.0 ± 0.0
3.729AspAsp: 3.729 ± 0.0
3.729AspGlu: 3.729 ± 0.0
4.351AspPhe: 4.351 ± 0.0
4.351AspGly: 4.351 ± 0.0
0.622AspHis: 0.622 ± 0.0
1.243AspIle: 1.243 ± 0.0
3.729AspLys: 3.729 ± 0.0
4.351AspLeu: 4.351 ± 0.0
3.108AspMet: 3.108 ± 0.0
0.622AspAsn: 0.622 ± 0.0
3.729AspPro: 3.729 ± 0.0
1.243AspGln: 1.243 ± 0.0
5.594AspArg: 5.594 ± 0.0
4.972AspSer: 4.972 ± 0.0
0.622AspThr: 0.622 ± 0.0
4.351AspVal: 4.351 ± 0.0
1.243AspTrp: 1.243 ± 0.0
1.243AspTyr: 1.243 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
7.458GluAla: 7.458 ± 0.0
1.243GluCys: 1.243 ± 0.0
4.351GluAsp: 4.351 ± 0.0
7.458GluGlu: 7.458 ± 0.0
2.486GluPhe: 2.486 ± 0.0
3.108GluGly: 3.108 ± 0.0
1.243GluHis: 1.243 ± 0.0
3.108GluIle: 3.108 ± 0.0
3.108GluLys: 3.108 ± 0.0
3.729GluLeu: 3.729 ± 0.0
0.622GluMet: 0.622 ± 0.0
2.486GluAsn: 2.486 ± 0.0
4.351GluPro: 4.351 ± 0.0
4.351GluGln: 4.351 ± 0.0
6.215GluArg: 6.215 ± 0.0
1.865GluSer: 1.865 ± 0.0
3.729GluThr: 3.729 ± 0.0
1.243GluVal: 1.243 ± 0.0
0.622GluTrp: 0.622 ± 0.0
1.865GluTyr: 1.865 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.865PheAla: 1.865 ± 0.0
1.865PheCys: 1.865 ± 0.0
3.108PheAsp: 3.108 ± 0.0
4.972PheGlu: 4.972 ± 0.0
1.865PhePhe: 1.865 ± 0.0
1.865PheGly: 1.865 ± 0.0
0.0PheHis: 0.0 ± 0.0
1.865PheIle: 1.865 ± 0.0
1.865PheLys: 1.865 ± 0.0
3.729PheLeu: 3.729 ± 0.0
0.0PheMet: 0.0 ± 0.0
1.865PheAsn: 1.865 ± 0.0
4.972PhePro: 4.972 ± 0.0
0.622PheGln: 0.622 ± 0.0
4.351PheArg: 4.351 ± 0.0
0.622PheSer: 0.622 ± 0.0
1.865PheThr: 1.865 ± 0.0
4.972PheVal: 4.972 ± 0.0
2.486PheTrp: 2.486 ± 0.0
1.243PheTyr: 1.243 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
9.323GlyAla: 9.323 ± 0.0
0.0GlyCys: 0.0 ± 0.0
4.351GlyAsp: 4.351 ± 0.0
5.594GlyGlu: 5.594 ± 0.0
1.865GlyPhe: 1.865 ± 0.0
6.215GlyGly: 6.215 ± 0.0
1.865GlyHis: 1.865 ± 0.0
2.486GlyIle: 2.486 ± 0.0
3.729GlyLys: 3.729 ± 0.0
5.594GlyLeu: 5.594 ± 0.0
0.0GlyMet: 0.0 ± 0.0
1.865GlyAsn: 1.865 ± 0.0
5.594GlyPro: 5.594 ± 0.0
1.865GlyGln: 1.865 ± 0.0
2.486GlyArg: 2.486 ± 0.0
4.351GlySer: 4.351 ± 0.0
2.486GlyThr: 2.486 ± 0.0
3.108GlyVal: 3.108 ± 0.0
0.622GlyTrp: 0.622 ± 0.0
0.622GlyTyr: 0.622 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.243HisAla: 1.243 ± 0.0
0.622HisCys: 0.622 ± 0.0
1.243HisAsp: 1.243 ± 0.0
1.865HisGlu: 1.865 ± 0.0
1.243HisPhe: 1.243 ± 0.0
1.243HisGly: 1.243 ± 0.0
0.622HisHis: 0.622 ± 0.0
0.622HisIle: 0.622 ± 0.0
1.243HisLys: 1.243 ± 0.0
1.243HisLeu: 1.243 ± 0.0
0.0HisMet: 0.0 ± 0.0
1.865HisAsn: 1.865 ± 0.0
1.243HisPro: 1.243 ± 0.0
0.0HisGln: 0.0 ± 0.0
2.486HisArg: 2.486 ± 0.0
0.622HisSer: 0.622 ± 0.0
1.243HisThr: 1.243 ± 0.0
1.865HisVal: 1.865 ± 0.0
0.622HisTrp: 0.622 ± 0.0
0.622HisTyr: 0.622 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.486IleAla: 2.486 ± 0.0
0.622IleCys: 0.622 ± 0.0
2.486IleAsp: 2.486 ± 0.0
1.243IleGlu: 1.243 ± 0.0
0.622IlePhe: 0.622 ± 0.0
1.865IleGly: 1.865 ± 0.0
0.622IleHis: 0.622 ± 0.0
1.243IleIle: 1.243 ± 0.0
4.351IleLys: 4.351 ± 0.0
6.215IleLeu: 6.215 ± 0.0
0.0IleMet: 0.0 ± 0.0
0.622IleAsn: 0.622 ± 0.0
0.622IlePro: 0.622 ± 0.0
3.108IleGln: 3.108 ± 0.0
5.594IleArg: 5.594 ± 0.0
2.486IleSer: 2.486 ± 0.0
3.729IleThr: 3.729 ± 0.0
3.729IleVal: 3.729 ± 0.0
0.0IleTrp: 0.0 ± 0.0
1.243IleTyr: 1.243 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
3.729LysAla: 3.729 ± 0.0
1.243LysCys: 1.243 ± 0.0
3.108LysAsp: 3.108 ± 0.0
3.108LysGlu: 3.108 ± 0.0
4.972LysPhe: 4.972 ± 0.0
3.729LysGly: 3.729 ± 0.0
0.0LysHis: 0.0 ± 0.0
2.486LysIle: 2.486 ± 0.0
3.108LysLys: 3.108 ± 0.0
3.729LysLeu: 3.729 ± 0.0
0.622LysMet: 0.622 ± 0.0
0.622LysAsn: 0.622 ± 0.0
4.972LysPro: 4.972 ± 0.0
1.243LysGln: 1.243 ± 0.0
8.08LysArg: 8.08 ± 0.0
1.865LysSer: 1.865 ± 0.0
5.594LysThr: 5.594 ± 0.0
8.701LysVal: 8.701 ± 0.0
0.622LysTrp: 0.622 ± 0.0
0.622LysTyr: 0.622 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
4.351LeuAla: 4.351 ± 0.0
1.243LeuCys: 1.243 ± 0.0
4.972LeuAsp: 4.972 ± 0.0
5.594LeuGlu: 5.594 ± 0.0
3.108LeuPhe: 3.108 ± 0.0
8.08LeuGly: 8.08 ± 0.0
3.108LeuHis: 3.108 ± 0.0
3.108LeuIle: 3.108 ± 0.0
8.701LeuLys: 8.701 ± 0.0
8.08LeuLeu: 8.08 ± 0.0
1.243LeuMet: 1.243 ± 0.0
2.486LeuAsn: 2.486 ± 0.0
7.458LeuPro: 7.458 ± 0.0
1.865LeuGln: 1.865 ± 0.0
6.215LeuArg: 6.215 ± 0.0
6.837LeuSer: 6.837 ± 0.0
4.351LeuThr: 4.351 ± 0.0
6.215LeuVal: 6.215 ± 0.0
2.486LeuTrp: 2.486 ± 0.0
3.729LeuTyr: 3.729 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.865MetAla: 1.865 ± 0.0
0.622MetCys: 0.622 ± 0.0
0.0MetAsp: 0.0 ± 0.0
1.243MetGlu: 1.243 ± 0.0
0.0MetPhe: 0.0 ± 0.0
1.243MetGly: 1.243 ± 0.0
0.622MetHis: 0.622 ± 0.0
1.243MetIle: 1.243 ± 0.0
3.108MetLys: 3.108 ± 0.0
2.486MetLeu: 2.486 ± 0.0
0.0MetMet: 0.0 ± 0.0
0.622MetAsn: 0.622 ± 0.0
0.622MetPro: 0.622 ± 0.0
0.622MetGln: 0.622 ± 0.0
3.108MetArg: 3.108 ± 0.0
2.486MetSer: 2.486 ± 0.0
0.0MetThr: 0.0 ± 0.0
1.243MetVal: 1.243 ± 0.0
0.0MetTrp: 0.0 ± 0.0
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
4.351AsnAla: 4.351 ± 0.0
0.0AsnCys: 0.0 ± 0.0
1.865AsnAsp: 1.865 ± 0.0
1.865AsnGlu: 1.865 ± 0.0
3.108AsnPhe: 3.108 ± 0.0
3.108AsnGly: 3.108 ± 0.0
0.0AsnHis: 0.0 ± 0.0
4.972AsnIle: 4.972 ± 0.0
1.865AsnLys: 1.865 ± 0.0
1.243AsnLeu: 1.243 ± 0.0
1.243AsnMet: 1.243 ± 0.0
0.622AsnAsn: 0.622 ± 0.0
3.108AsnPro: 3.108 ± 0.0
0.622AsnGln: 0.622 ± 0.0
0.622AsnArg: 0.622 ± 0.0
1.865AsnSer: 1.865 ± 0.0
1.243AsnThr: 1.243 ± 0.0
1.243AsnVal: 1.243 ± 0.0
0.0AsnTrp: 0.0 ± 0.0
0.0AsnTyr: 0.0 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
6.215ProAla: 6.215 ± 0.0
1.865ProCys: 1.865 ± 0.0
3.108ProAsp: 3.108 ± 0.0
2.486ProGlu: 2.486 ± 0.0
3.108ProPhe: 3.108 ± 0.0
3.729ProGly: 3.729 ± 0.0
1.243ProHis: 1.243 ± 0.0
2.486ProIle: 2.486 ± 0.0
2.486ProLys: 2.486 ± 0.0
7.458ProLeu: 7.458 ± 0.0
1.243ProMet: 1.243 ± 0.0
1.243ProAsn: 1.243 ± 0.0
1.865ProPro: 1.865 ± 0.0
1.243ProGln: 1.243 ± 0.0
2.486ProArg: 2.486 ± 0.0
4.972ProSer: 4.972 ± 0.0
4.351ProThr: 4.351 ± 0.0
7.458ProVal: 7.458 ± 0.0
1.243ProTrp: 1.243 ± 0.0
1.243ProTyr: 1.243 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
1.865GlnAla: 1.865 ± 0.0
0.0GlnCys: 0.0 ± 0.0
2.486GlnAsp: 2.486 ± 0.0
0.622GlnGlu: 0.622 ± 0.0
2.486GlnPhe: 2.486 ± 0.0
1.243GlnGly: 1.243 ± 0.0
1.243GlnHis: 1.243 ± 0.0
1.243GlnIle: 1.243 ± 0.0
1.865GlnLys: 1.865 ± 0.0
3.108GlnLeu: 3.108 ± 0.0
1.243GlnMet: 1.243 ± 0.0
1.243GlnAsn: 1.243 ± 0.0
1.865GlnPro: 1.865 ± 0.0
1.243GlnGln: 1.243 ± 0.0
1.243GlnArg: 1.243 ± 0.0
1.243GlnSer: 1.243 ± 0.0
1.243GlnThr: 1.243 ± 0.0
0.0GlnVal: 0.0 ± 0.0
0.622GlnTrp: 0.622 ± 0.0
0.0GlnTyr: 0.0 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
6.215ArgAla: 6.215 ± 0.0
1.243ArgCys: 1.243 ± 0.0
4.972ArgAsp: 4.972 ± 0.0
4.351ArgGlu: 4.351 ± 0.0
3.108ArgPhe: 3.108 ± 0.0
5.594ArgGly: 5.594 ± 0.0
1.243ArgHis: 1.243 ± 0.0
1.865ArgIle: 1.865 ± 0.0
2.486ArgLys: 2.486 ± 0.0
10.566ArgLeu: 10.566 ± 0.0
1.243ArgMet: 1.243 ± 0.0
3.108ArgAsn: 3.108 ± 0.0
3.729ArgPro: 3.729 ± 0.0
2.486ArgGln: 2.486 ± 0.0
4.351ArgArg: 4.351 ± 0.0
6.837ArgSer: 6.837 ± 0.0
3.108ArgThr: 3.108 ± 0.0
3.108ArgVal: 3.108 ± 0.0
1.243ArgTrp: 1.243 ± 0.0
0.622ArgTyr: 0.622 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
3.108SerAla: 3.108 ± 0.0
1.243SerCys: 1.243 ± 0.0
2.486SerAsp: 2.486 ± 0.0
4.972SerGlu: 4.972 ± 0.0
3.729SerPhe: 3.729 ± 0.0
7.458SerGly: 7.458 ± 0.0
3.108SerHis: 3.108 ± 0.0
4.972SerIle: 4.972 ± 0.0
4.972SerLys: 4.972 ± 0.0
8.701SerLeu: 8.701 ± 0.0
1.243SerMet: 1.243 ± 0.0
3.729SerAsn: 3.729 ± 0.0
4.972SerPro: 4.972 ± 0.0
0.622SerGln: 0.622 ± 0.0
3.108SerArg: 3.108 ± 0.0
3.108SerSer: 3.108 ± 0.0
4.351SerThr: 4.351 ± 0.0
5.594SerVal: 5.594 ± 0.0
0.0SerTrp: 0.0 ± 0.0
0.0SerTyr: 0.0 ± 0.0
0.622SerXaa: 0.622 ± 0.0
Thr
4.351ThrAla: 4.351 ± 0.0
0.0ThrCys: 0.0 ± 0.0
1.243ThrAsp: 1.243 ± 0.0
2.486ThrGlu: 2.486 ± 0.0
1.243ThrPhe: 1.243 ± 0.0
1.243ThrGly: 1.243 ± 0.0
2.486ThrHis: 2.486 ± 0.0
2.486ThrIle: 2.486 ± 0.0
4.351ThrLys: 4.351 ± 0.0
2.486ThrLeu: 2.486 ± 0.0
1.865ThrMet: 1.865 ± 0.0
3.729ThrAsn: 3.729 ± 0.0
2.486ThrPro: 2.486 ± 0.0
0.0ThrGln: 0.0 ± 0.0
3.108ThrArg: 3.108 ± 0.0
6.215ThrSer: 6.215 ± 0.0
3.729ThrThr: 3.729 ± 0.0
5.594ThrVal: 5.594 ± 0.0
3.108ThrTrp: 3.108 ± 0.0
0.622ThrTyr: 0.622 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
6.215ValAla: 6.215 ± 0.0
1.865ValCys: 1.865 ± 0.0
6.215ValAsp: 6.215 ± 0.0
3.108ValGlu: 3.108 ± 0.0
1.865ValPhe: 1.865 ± 0.0
3.108ValGly: 3.108 ± 0.0
1.865ValHis: 1.865 ± 0.0
1.865ValIle: 1.865 ± 0.0
2.486ValLys: 2.486 ± 0.0
8.08ValLeu: 8.08 ± 0.0
1.865ValMet: 1.865 ± 0.0
3.108ValAsn: 3.108 ± 0.0
3.108ValPro: 3.108 ± 0.0
1.865ValGln: 1.865 ± 0.0
6.837ValArg: 6.837 ± 0.0
5.594ValSer: 5.594 ± 0.0
4.351ValThr: 4.351 ± 0.0
3.729ValVal: 3.729 ± 0.0
0.622ValTrp: 0.622 ± 0.0
3.108ValTyr: 3.108 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.865TrpAla: 1.865 ± 0.0
0.622TrpCys: 0.622 ± 0.0
0.0TrpAsp: 0.0 ± 0.0
0.622TrpGlu: 0.622 ± 0.0
0.0TrpPhe: 0.0 ± 0.0
0.622TrpGly: 0.622 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.0TrpIle: 0.0 ± 0.0
0.622TrpLys: 0.622 ± 0.0
1.865TrpLeu: 1.865 ± 0.0
0.622TrpMet: 0.622 ± 0.0
1.243TrpAsn: 1.243 ± 0.0
0.0TrpPro: 0.0 ± 0.0
1.243TrpGln: 1.243 ± 0.0
1.865TrpArg: 1.865 ± 0.0
1.865TrpSer: 1.865 ± 0.0
0.622TrpThr: 0.622 ± 0.0
1.865TrpVal: 1.865 ± 0.0
1.243TrpTrp: 1.243 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.243TyrAla: 1.243 ± 0.0
0.622TyrCys: 0.622 ± 0.0
1.243TyrAsp: 1.243 ± 0.0
1.243TyrGlu: 1.243 ± 0.0
2.486TyrPhe: 2.486 ± 0.0
0.0TyrGly: 0.0 ± 0.0
1.243TyrHis: 1.243 ± 0.0
0.0TyrIle: 0.0 ± 0.0
2.486TyrLys: 2.486 ± 0.0
2.486TyrLeu: 2.486 ± 0.0
0.0TyrMet: 0.0 ± 0.0
1.243TyrAsn: 1.243 ± 0.0
0.0TyrPro: 0.0 ± 0.0
0.0TyrGln: 0.0 ± 0.0
0.0TyrArg: 0.0 ± 0.0
4.351TyrSer: 4.351 ± 0.0
1.243TyrThr: 1.243 ± 0.0
1.865TyrVal: 1.865 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
0.622TyrTyr: 0.622 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.622XaaArg: 0.622 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (1610 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski