Christensenella minuta

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Christensenellaceae; Christensenella

Average proteome isoelectric point is 6.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3119 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A136Q5C9|A0A136Q5C9_9FIRM RND transporter HAE1/HME family permease protein OS=Christensenella minuta OX=626937 GN=HMPREF3293_01478 PE=4 SV=1
MM1 pKa = 7.9DD2 pKa = 3.76RR3 pKa = 11.84RR4 pKa = 11.84KK5 pKa = 10.34RR6 pKa = 11.84FLTMLVCFVLAAFMLTACAGGGAPAATEE34 pKa = 4.23SVAAGQGAEE43 pKa = 4.34TEE45 pKa = 4.57TPAATDD51 pKa = 3.23TAEE54 pKa = 4.65AGTEE58 pKa = 3.96SSPAILTSADD68 pKa = 3.36VGDD71 pKa = 3.76VSGIEE76 pKa = 4.19GWDD79 pKa = 3.74GPVEE83 pKa = 4.34SQVMTAGEE91 pKa = 4.8DD92 pKa = 3.56GDD94 pKa = 3.91QFGTAEE100 pKa = 4.12STVVVGKK107 pKa = 10.35GPKK110 pKa = 10.35GEE112 pKa = 4.56VSTPWTEE119 pKa = 3.47IALTDD124 pKa = 3.71EE125 pKa = 4.65EE126 pKa = 4.81KK127 pKa = 11.01EE128 pKa = 4.11QIRR131 pKa = 11.84SGNYY135 pKa = 7.99KK136 pKa = 10.26AAICFHH142 pKa = 6.16YY143 pKa = 8.22TTDD146 pKa = 2.97DD147 pKa = 3.57WYY149 pKa = 10.78VMQRR153 pKa = 11.84KK154 pKa = 9.31GIEE157 pKa = 3.81EE158 pKa = 4.15TFADD162 pKa = 4.01LGIEE166 pKa = 4.34VVAVTDD172 pKa = 3.76AGFSAEE178 pKa = 4.03QQVSDD183 pKa = 3.99IEE185 pKa = 4.57NVLEE189 pKa = 4.45LNPDD193 pKa = 4.07IIISIPVDD201 pKa = 3.47EE202 pKa = 4.94TSTAVAYY209 pKa = 10.11QKK211 pKa = 11.12AADD214 pKa = 3.96AGVKK218 pKa = 9.87LVFMDD223 pKa = 3.98NCPSNMTAGKK233 pKa = 10.13DD234 pKa = 3.61YY235 pKa = 11.23VSIVAADD242 pKa = 4.1RR243 pKa = 11.84YY244 pKa = 9.0GCGMICADD252 pKa = 4.73LMARR256 pKa = 11.84EE257 pKa = 4.37LNYY260 pKa = 10.45EE261 pKa = 3.96GTVGVIYY268 pKa = 10.68YY269 pKa = 10.32DD270 pKa = 3.34ADD272 pKa = 3.74FFVTTRR278 pKa = 11.84DD279 pKa = 3.17CAGFVDD285 pKa = 4.96RR286 pKa = 11.84MKK288 pKa = 10.94LKK290 pKa = 10.39YY291 pKa = 9.95PNIEE295 pKa = 3.83IVTEE299 pKa = 3.96MGFADD304 pKa = 3.52ATLSGEE310 pKa = 4.34VADD313 pKa = 5.9AMLAQYY319 pKa = 10.49PDD321 pKa = 3.07IDD323 pKa = 4.86GIFGSWDD330 pKa = 3.15VPAEE334 pKa = 4.16YY335 pKa = 9.88IASSASAVGRR345 pKa = 11.84DD346 pKa = 3.7DD347 pKa = 5.82LVVNCVGLGTTTASMTAGDD366 pKa = 4.8GIINTISTQRR376 pKa = 11.84PYY378 pKa = 11.4DD379 pKa = 3.52QGCTEE384 pKa = 5.1ALLACYY390 pKa = 10.26GLLGKK395 pKa = 9.7DD396 pKa = 2.91APEE399 pKa = 4.25YY400 pKa = 9.32VTVPALGVTKK410 pKa = 10.44EE411 pKa = 4.02GSEE414 pKa = 4.06NSASLKK420 pKa = 10.38DD421 pKa = 3.85AYY423 pKa = 11.06QLFYY427 pKa = 11.02QIDD430 pKa = 4.05TLPDD434 pKa = 3.0WLQQLMM440 pKa = 4.09

Molecular weight: 46.71 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A136Q814|A0A136Q814_9FIRM DEAD-box ATP-dependent RNA helicase CshA family protein OS=Christensenella minuta OX=626937 GN=HMPREF3293_00367 PE=3 SV=1
MM1 pKa = 7.31KK2 pKa = 10.07RR3 pKa = 11.84KK4 pKa = 9.67KK5 pKa = 10.65SPWRR9 pKa = 11.84MLHH12 pKa = 5.97GRR14 pKa = 11.84GISNVKK20 pKa = 9.99HH21 pKa = 5.61IRR23 pKa = 11.84KK24 pKa = 9.58APGTLSGAFPRR35 pKa = 11.84RR36 pKa = 11.84SRR38 pKa = 11.84RR39 pKa = 11.84GTGQRR44 pKa = 11.84LLTVAFFF51 pKa = 4.35

Molecular weight: 5.85 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3119

0

3119

890553

29

4909

285.5

31.61

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.169 ± 0.053

1.466 ± 0.021

5.478 ± 0.035

7.202 ± 0.049

4.079 ± 0.036

8.03 ± 0.042

1.628 ± 0.02

6.821 ± 0.045

6.143 ± 0.042

8.803 ± 0.05

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.101 ± 0.027

3.807 ± 0.026

3.75 ± 0.028

3.136 ± 0.023

5.069 ± 0.044

5.406 ± 0.037

5.347 ± 0.051

7.093 ± 0.039

0.838 ± 0.014

3.636 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski