Mobilicoccus pelagius NBRC 104925

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Dermatophilaceae; Mobilicoccus; Mobilicoccus pelagius

Average proteome isoelectric point is 6.18

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3112 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|H5UW50|H5UW50_9MICO Putative ABC transporter permease/ATP-binding protein OS=Mobilicoccus pelagius NBRC 104925 OX=1089455 GN=MOPEL_135_01960 PE=4 SV=1
MM1 pKa = 7.9SDD3 pKa = 3.07GCGSGDD9 pKa = 3.24GGGCGGCGGACGGPYY24 pKa = 9.97VPEE27 pKa = 5.19LDD29 pKa = 4.48ARR31 pKa = 11.84EE32 pKa = 4.57LDD34 pKa = 3.46PMIRR38 pKa = 11.84QSAIFGVLMGLPPQGVVRR56 pKa = 11.84IVVNSDD62 pKa = 2.97PSGIADD68 pKa = 4.01LLEE71 pKa = 4.13EE72 pKa = 4.65RR73 pKa = 11.84LPGQYY78 pKa = 10.21SADD81 pKa = 3.37VDD83 pKa = 4.1TVSEE87 pKa = 4.07DD88 pKa = 3.28EE89 pKa = 4.16YY90 pKa = 11.32RR91 pKa = 11.84VLFSRR96 pKa = 11.84AA97 pKa = 3.1

Molecular weight: 9.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|H5USY4|H5USY4_9MICO Ribosomal RNA small subunit methyltransferase G OS=Mobilicoccus pelagius NBRC 104925 OX=1089455 GN=rsmG PE=3 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.0RR4 pKa = 11.84TFQPNNRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84AKK15 pKa = 8.7THH17 pKa = 5.16GFRR20 pKa = 11.84LRR22 pKa = 11.84MSTRR26 pKa = 11.84AGRR29 pKa = 11.84SIIASRR35 pKa = 11.84RR36 pKa = 11.84LKK38 pKa = 10.57GRR40 pKa = 11.84KK41 pKa = 9.08KK42 pKa = 9.61LTAA45 pKa = 4.2

Molecular weight: 5.3 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3112

0

3112

1040358

29

1835

334.3

35.73

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.234 ± 0.061

0.767 ± 0.012

6.546 ± 0.041

5.802 ± 0.047

2.635 ± 0.024

9.365 ± 0.038

2.352 ± 0.02

3.291 ± 0.033

1.88 ± 0.037

9.836 ± 0.046

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.925 ± 0.02

1.581 ± 0.021

6.054 ± 0.04

2.379 ± 0.024

8.158 ± 0.051

5.076 ± 0.03

6.503 ± 0.038

9.383 ± 0.045

1.412 ± 0.019

1.823 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski