Beihai sobemo-like virus 13

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 6.08

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KF26|A0A1L3KF26_9VIRU Uncharacterized protein OS=Beihai sobemo-like virus 13 OX=1922684 PE=4 SV=1
MM1 pKa = 7.73LDD3 pKa = 3.66DD4 pKa = 6.23LEE6 pKa = 5.36TFTDD10 pKa = 5.07WINQQNRR17 pKa = 11.84EE18 pKa = 4.11TMRR21 pKa = 11.84MDD23 pKa = 4.69PDD25 pKa = 3.81SSPGIPWHH33 pKa = 6.43SAGSTNGEE41 pKa = 3.65IFDD44 pKa = 4.04YY45 pKa = 11.36VPGFGYY51 pKa = 10.57NKK53 pKa = 9.81NRR55 pKa = 11.84LEE57 pKa = 4.07EE58 pKa = 3.79LRR60 pKa = 11.84LAVKK64 pKa = 10.08QRR66 pKa = 11.84LVEE69 pKa = 4.15LEE71 pKa = 4.11VGSALDD77 pKa = 4.67PISLFIKK84 pKa = 10.44QEE86 pKa = 3.63YY87 pKa = 9.18HH88 pKa = 5.31KK89 pKa = 10.62QKK91 pKa = 10.76KK92 pKa = 9.69ADD94 pKa = 3.59EE95 pKa = 4.22EE96 pKa = 4.02RR97 pKa = 11.84WRR99 pKa = 11.84LISSVGLTDD108 pKa = 3.66QIVARR113 pKa = 11.84MLFEE117 pKa = 4.52PFFDD121 pKa = 3.98YY122 pKa = 11.17VLARR126 pKa = 11.84PMQFRR131 pKa = 11.84MAIGWGLTAPGSLTFMNAHH150 pKa = 7.33IGPDD154 pKa = 3.56PVEE157 pKa = 4.52AADD160 pKa = 3.86KK161 pKa = 10.97SAWDD165 pKa = 3.43WTVQPWLFDD174 pKa = 3.33VFYY177 pKa = 9.91NICLALFDD185 pKa = 5.04SRR187 pKa = 11.84DD188 pKa = 3.66DD189 pKa = 3.53RR190 pKa = 11.84FKK192 pKa = 10.79TIMRR196 pKa = 11.84HH197 pKa = 4.57HH198 pKa = 6.82LRR200 pKa = 11.84AICYY204 pKa = 10.15DD205 pKa = 3.23KK206 pKa = 11.5VFDD209 pKa = 3.97INGRR213 pKa = 11.84RR214 pKa = 11.84YY215 pKa = 9.35RR216 pKa = 11.84QEE218 pKa = 3.93LPGIMPSGWFMTILFNSVSQLILHH242 pKa = 7.23AYY244 pKa = 9.77ADD246 pKa = 4.71DD247 pKa = 4.25GDD249 pKa = 4.04EE250 pKa = 4.27FAWPLVMGDD259 pKa = 4.62DD260 pKa = 4.8TIQPQASPQYY270 pKa = 8.25WDD272 pKa = 4.42RR273 pKa = 11.84IRR275 pKa = 11.84KK276 pKa = 6.7TGCILKK282 pKa = 9.84EE283 pKa = 3.94LSNEE287 pKa = 3.77RR288 pKa = 11.84DD289 pKa = 3.15FCGFNFSPEE298 pKa = 3.96AYY300 pKa = 10.25LPVYY304 pKa = 9.12GLKK307 pKa = 10.17YY308 pKa = 10.66DD309 pKa = 3.97FAIHH313 pKa = 6.52HH314 pKa = 6.71IEE316 pKa = 3.92PSVLKK321 pKa = 9.12EE322 pKa = 4.03TLASFQWLYY331 pKa = 11.72AFVPQQLSSIQRR343 pKa = 11.84YY344 pKa = 8.0IRR346 pKa = 11.84EE347 pKa = 3.68IGYY350 pKa = 10.29ADD352 pKa = 3.91LVVRR356 pKa = 11.84PQDD359 pKa = 3.22MQRR362 pKa = 11.84RR363 pKa = 11.84VLGLPVRR370 pKa = 11.84MPRR373 pKa = 11.84LL374 pKa = 3.42

Molecular weight: 43.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KF26|A0A1L3KF26_9VIRU Uncharacterized protein OS=Beihai sobemo-like virus 13 OX=1922684 PE=4 SV=1
MM1 pKa = 7.25VVIMTHH7 pKa = 6.94FYY9 pKa = 11.24QNLTYY14 pKa = 10.59FLNTDD19 pKa = 4.16LAVGYY24 pKa = 9.99IIGLIVFLLLEE35 pKa = 4.26YY36 pKa = 10.15RR37 pKa = 11.84PKK39 pKa = 10.43IFGPHH44 pKa = 6.34RR45 pKa = 11.84MPSLFYY51 pKa = 10.66NLKK54 pKa = 10.35LLFWPSSVALLRR66 pKa = 11.84LAAIALLWILQPYY79 pKa = 10.08ALTNVYY85 pKa = 10.21FEE87 pKa = 4.45EE88 pKa = 4.79ALLYY92 pKa = 10.48LPQGTEE98 pKa = 3.85GAFFGFRR105 pKa = 11.84FFFLMAGIVWTVKK118 pKa = 8.67TAYY121 pKa = 9.71VSLRR125 pKa = 11.84ILVGGLEE132 pKa = 4.0VAAYY136 pKa = 9.4YY137 pKa = 10.63SSSVDD142 pKa = 3.36LSVPAQITVSSDD154 pKa = 2.64KK155 pKa = 10.78SRR157 pKa = 11.84SSVAVGVYY165 pKa = 10.14VDD167 pKa = 5.71GDD169 pKa = 3.94FEE171 pKa = 5.93SNGQATCVAVEE182 pKa = 3.93SRR184 pKa = 11.84RR185 pKa = 11.84EE186 pKa = 3.77DD187 pKa = 4.0GIADD191 pKa = 3.68EE192 pKa = 6.01FITATHH198 pKa = 5.91VVTDD202 pKa = 4.79LDD204 pKa = 4.44LSNLVIWRR212 pKa = 11.84AGVALRR218 pKa = 11.84VQSVLQPDD226 pKa = 4.05PNGLHH231 pKa = 7.47DD232 pKa = 3.67IAILRR237 pKa = 11.84VRR239 pKa = 11.84HH240 pKa = 5.03GASRR244 pKa = 11.84LGVRR248 pKa = 11.84PADD251 pKa = 3.69LGLFPQTTGTASLHH265 pKa = 5.15CVQRR269 pKa = 11.84EE270 pKa = 4.29VIAKK274 pKa = 8.04TVGSVTPGSTRR285 pKa = 11.84YY286 pKa = 10.25SNYY289 pKa = 10.42AFTGNTKK296 pKa = 10.48AGWSGAGLYY305 pKa = 10.51DD306 pKa = 3.24VTGRR310 pKa = 11.84FIGMHH315 pKa = 5.26TCFLGDD321 pKa = 3.27TSKK324 pKa = 10.45MVNGGYY330 pKa = 10.33NLVPIMDD337 pKa = 3.65HH338 pKa = 4.87VLRR341 pKa = 11.84YY342 pKa = 9.85KK343 pKa = 10.44PLNKK347 pKa = 9.97NCASCDD353 pKa = 3.5SKK355 pKa = 11.19LTMLRR360 pKa = 11.84IRR362 pKa = 11.84EE363 pKa = 4.06GLMEE367 pKa = 5.54DD368 pKa = 4.52FVTVNPKK375 pKa = 10.28SKK377 pKa = 10.73DD378 pKa = 3.32YY379 pKa = 10.91GVCNEE384 pKa = 4.26CSGLEE389 pKa = 4.0KK390 pKa = 10.8KK391 pKa = 10.06KK392 pKa = 11.04GKK394 pKa = 9.52NKK396 pKa = 9.9KK397 pKa = 9.21KK398 pKa = 10.29RR399 pKa = 11.84RR400 pKa = 11.84TGGTWGWLDD409 pKa = 3.69EE410 pKa = 5.1KK411 pKa = 10.82ILSGKK416 pKa = 10.33AKK418 pKa = 9.56IRR420 pKa = 11.84KK421 pKa = 8.39VPWGLGEE428 pKa = 3.79WLYY431 pKa = 10.91EE432 pKa = 4.06VEE434 pKa = 4.47TEE436 pKa = 4.23DD437 pKa = 4.11GTVEE441 pKa = 4.06TLTEE445 pKa = 4.15DD446 pKa = 3.54EE447 pKa = 4.33AVNRR451 pKa = 11.84LSKK454 pKa = 10.46AACRR458 pKa = 11.84KK459 pKa = 10.05LGIFKK464 pKa = 10.31SDD466 pKa = 3.13RR467 pKa = 11.84PTDD470 pKa = 3.39EE471 pKa = 6.11DD472 pKa = 4.18EE473 pKa = 4.42YY474 pKa = 11.19QEE476 pKa = 4.23EE477 pKa = 4.37RR478 pKa = 11.84NDD480 pKa = 3.14FHH482 pKa = 9.46DD483 pKa = 3.75YY484 pKa = 9.67MDD486 pKa = 4.79RR487 pKa = 11.84EE488 pKa = 4.24RR489 pKa = 11.84FDD491 pKa = 3.14PWAHH495 pKa = 7.32LEE497 pKa = 4.02RR498 pKa = 11.84QKK500 pKa = 10.85NQKK503 pKa = 9.43NLSDD507 pKa = 4.05SKK509 pKa = 11.04KK510 pKa = 10.38SSQSQQEE517 pKa = 4.0AGKK520 pKa = 10.37GSPTIKK526 pKa = 10.25PLPRR530 pKa = 11.84PSAPVALPSLDD541 pKa = 3.37EE542 pKa = 3.86ARR544 pKa = 11.84RR545 pKa = 11.84AVEE548 pKa = 3.87EE549 pKa = 3.98NEE551 pKa = 3.95EE552 pKa = 4.19VVRR555 pKa = 11.84QVSVVIRR562 pKa = 11.84ALAEE566 pKa = 3.84AQLRR570 pKa = 11.84ARR572 pKa = 11.84RR573 pKa = 11.84AWEE576 pKa = 3.77ADD578 pKa = 3.03EE579 pKa = 6.64SEE581 pKa = 4.59DD582 pKa = 3.1HH583 pKa = 6.3WKK585 pKa = 10.74AILQLSVDD593 pKa = 3.41THH595 pKa = 6.41ALQNFLADD603 pKa = 3.94VKK605 pKa = 11.09DD606 pKa = 3.93SNQDD610 pKa = 2.74ITKK613 pKa = 9.76LWNQISQGSEE623 pKa = 3.2IDD625 pKa = 3.52VSLHH629 pKa = 5.35KK630 pKa = 10.37RR631 pKa = 11.84VEE633 pKa = 3.77RR634 pKa = 11.84RR635 pKa = 11.84RR636 pKa = 11.84TKK638 pKa = 10.17TKK640 pKa = 10.03EE641 pKa = 3.84KK642 pKa = 9.9PPPSPEE648 pKa = 3.46ILQMLGRR655 pKa = 11.84ADD657 pKa = 3.82TVHH660 pKa = 6.98ASALTTLVNIPKK672 pKa = 10.16RR673 pKa = 11.84LRR675 pKa = 11.84PTAGQEE681 pKa = 3.99NLSGDD686 pKa = 4.03MIQYY690 pKa = 9.34LGKK693 pKa = 10.45YY694 pKa = 7.75GVKK697 pKa = 10.07IADD700 pKa = 4.14DD701 pKa = 4.04PFNTPEE707 pKa = 4.53DD708 pKa = 3.65SLNSVRR714 pKa = 11.84AATGGPQQPEE724 pKa = 3.96VSKK727 pKa = 10.65PSTSTSQSEE736 pKa = 4.45STRR739 pKa = 11.84TTRR742 pKa = 11.84SNSSQGKK749 pKa = 8.76KK750 pKa = 9.6KK751 pKa = 10.58KK752 pKa = 9.04KK753 pKa = 8.45TSQDD757 pKa = 3.12TSLKK761 pKa = 8.77TSKK764 pKa = 9.55TVEE767 pKa = 4.27DD768 pKa = 3.7SSNPQKK774 pKa = 11.25LEE776 pKa = 3.59IPKK779 pKa = 9.88LLKK782 pKa = 10.07PAFEE786 pKa = 5.55SILSINKK793 pKa = 7.91EE794 pKa = 3.78QQEE797 pKa = 4.06QLNRR801 pKa = 11.84QLQEE805 pKa = 3.69IAPEE809 pKa = 3.87LLEE812 pKa = 4.33EE813 pKa = 4.63FSHH816 pKa = 6.63FFGRR820 pKa = 11.84FEE822 pKa = 4.14DD823 pKa = 3.85TT824 pKa = 4.02

Molecular weight: 92.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1198

374

824

599.0

67.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.678 ± 0.281

1.002 ± 0.036

6.177 ± 0.839

6.344 ± 0.53

4.424 ± 0.918

6.26 ± 0.343

1.92 ± 0.117

5.008 ± 0.75

5.593 ± 1.126

9.933 ± 0.164

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.087 ± 0.739

3.589 ± 0.345

5.175 ± 0.519

4.591 ± 0.26

6.427 ± 0.421

7.429 ± 0.965

5.509 ± 1.082

6.678 ± 0.708

2.003 ± 0.499

3.172 ± 0.446
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski