Capybara microvirus Cap1_SP_48

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.23

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W4V5|A0A4P8W4V5_9VIRU Minor capsid protein OS=Capybara microvirus Cap1_SP_48 OX=2584779 PE=4 SV=1
MM1 pKa = 7.02NRR3 pKa = 11.84KK4 pKa = 9.25SFIEE8 pKa = 3.94NSVSKK13 pKa = 9.87YY14 pKa = 6.94YY15 pKa = 10.79HH16 pKa = 6.66SIEE19 pKa = 4.41TPPPTNDD26 pKa = 3.39VVCHH30 pKa = 5.36VVDD33 pKa = 3.81VTDD36 pKa = 5.46DD37 pKa = 3.62EE38 pKa = 5.16GNSYY42 pKa = 10.35PVVAIAEE49 pKa = 4.19KK50 pKa = 10.29KK51 pKa = 9.31YY52 pKa = 11.1GSFHH56 pKa = 7.72VSDD59 pKa = 4.82FDD61 pKa = 4.08LTNLINAGIDD71 pKa = 3.46PRR73 pKa = 11.84SVSISQSSAQYY84 pKa = 10.92LDD86 pKa = 5.18DD87 pKa = 4.65IEE89 pKa = 6.16HH90 pKa = 6.92FDD92 pKa = 4.14SLAKK96 pKa = 10.1TILSRR101 pKa = 11.84LDD103 pKa = 3.44NLEE106 pKa = 4.15VSQSPSGEE114 pKa = 4.17TLSIPSPVEE123 pKa = 3.38ATAPSQNN130 pKa = 3.16

Molecular weight: 14.2 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W7G2|A0A4P8W7G2_9VIRU Peptidase M15 OS=Capybara microvirus Cap1_SP_48 OX=2584779 PE=4 SV=1
MM1 pKa = 7.2RR2 pKa = 11.84TCFSILNRR10 pKa = 11.84SNYY13 pKa = 9.74FDD15 pKa = 3.45IEE17 pKa = 4.09RR18 pKa = 11.84SKK20 pKa = 11.13SHH22 pKa = 7.38FDD24 pKa = 3.18IEE26 pKa = 5.0SNALFLNQLNKK37 pKa = 10.29CNSYY41 pKa = 10.39EE42 pKa = 3.9IRR44 pKa = 11.84NHH46 pKa = 6.59FEE48 pKa = 3.46FEE50 pKa = 4.33EE51 pKa = 4.16IKK53 pKa = 10.93KK54 pKa = 10.79LGGQAFFYY62 pKa = 9.95TLSYY66 pKa = 11.33NDD68 pKa = 2.92AHH70 pKa = 6.84LPHH73 pKa = 6.53FHH75 pKa = 7.61GIPCHH80 pKa = 5.4DD81 pKa = 4.51HH82 pKa = 6.41EE83 pKa = 5.83DD84 pKa = 4.17LRR86 pKa = 11.84ALLNGAFSKK95 pKa = 10.49RR96 pKa = 11.84VKK98 pKa = 10.21RR99 pKa = 11.84YY100 pKa = 8.58CNCSLRR106 pKa = 11.84YY107 pKa = 9.49FITLEE112 pKa = 4.03LGEE115 pKa = 4.68GKK117 pKa = 10.5GSRR120 pKa = 11.84GLFKK124 pKa = 10.71NPHH127 pKa = 4.61YY128 pKa = 10.96HH129 pKa = 6.7CIFYY133 pKa = 10.61LRR135 pKa = 11.84PKK137 pKa = 10.23EE138 pKa = 3.83GEE140 pKa = 4.04IYY142 pKa = 11.09NKK144 pKa = 9.68IDD146 pKa = 3.75PLTFRR151 pKa = 11.84SFIRR155 pKa = 11.84EE156 pKa = 3.61YY157 pKa = 9.46WQGVDD162 pKa = 3.84IDD164 pKa = 4.66FSHH167 pKa = 7.44PSARR171 pKa = 11.84AKK173 pKa = 10.52DD174 pKa = 3.86FRR176 pKa = 11.84FGICQEE182 pKa = 3.66GKK184 pKa = 10.09YY185 pKa = 10.19FGEE188 pKa = 4.27ILTSAACRR196 pKa = 11.84YY197 pKa = 7.96CCKK200 pKa = 10.03YY201 pKa = 9.0TIKK204 pKa = 10.78SNAVIQHH211 pKa = 5.52YY212 pKa = 9.2LSCVSEE218 pKa = 4.08IQRR221 pKa = 11.84DD222 pKa = 3.69FDD224 pKa = 3.83NSLGGIKK231 pKa = 10.49YY232 pKa = 9.81SVSPEE237 pKa = 4.07EE238 pKa = 4.13YY239 pKa = 10.43NSFIDD244 pKa = 3.85DD245 pKa = 3.39QVKK248 pKa = 10.06IFKK251 pKa = 9.95NRR253 pKa = 11.84YY254 pKa = 6.32FVKK257 pKa = 10.17VRR259 pKa = 11.84CSQGLGSYY267 pKa = 10.42GLSQVNDD274 pKa = 3.85DD275 pKa = 4.4KK276 pKa = 11.94VVVPYY281 pKa = 10.82KK282 pKa = 10.18STFKK286 pKa = 10.65SYY288 pKa = 10.17PIPLYY293 pKa = 10.28YY294 pKa = 9.98YY295 pKa = 9.66RR296 pKa = 11.84KK297 pKa = 10.19LYY299 pKa = 10.0TNHH302 pKa = 6.69CKK304 pKa = 9.99NALGNVHH311 pKa = 6.62YY312 pKa = 9.53YY313 pKa = 10.66HH314 pKa = 6.81NSKK317 pKa = 10.43GLEE320 pKa = 3.76RR321 pKa = 11.84LRR323 pKa = 11.84NTLHH327 pKa = 6.92LRR329 pKa = 11.84IDD331 pKa = 3.71KK332 pKa = 10.81AKK334 pKa = 10.66SDD336 pKa = 3.73ALKK339 pKa = 10.37LVSMLSDD346 pKa = 3.2KK347 pKa = 11.14DD348 pKa = 3.89FNLSFTRR355 pKa = 11.84WLEE358 pKa = 3.99SNGIILSSSILDD370 pKa = 4.12LGLCAQRR377 pKa = 11.84YY378 pKa = 9.08AEE380 pKa = 4.11FSVVYY385 pKa = 10.15KK386 pKa = 10.59NRR388 pKa = 11.84YY389 pKa = 6.9YY390 pKa = 10.89TDD392 pKa = 4.25LNCPIDD398 pKa = 3.6IDD400 pKa = 4.21LDD402 pKa = 3.75HH403 pKa = 7.35EE404 pKa = 4.5FFIIPVEE411 pKa = 4.26TEE413 pKa = 3.74NALHH417 pKa = 6.86RR418 pKa = 11.84LAVQKK423 pKa = 10.63GRR425 pKa = 11.84YY426 pKa = 7.05EE427 pKa = 3.87VHH429 pKa = 6.74SYY431 pKa = 11.44ANHH434 pKa = 7.18PYY436 pKa = 9.39FSPYY440 pKa = 9.84YY441 pKa = 10.47VQFCLLDD448 pKa = 3.62LLKK451 pKa = 10.91EE452 pKa = 4.42FFRR455 pKa = 11.84QTISTTMYY463 pKa = 9.91RR464 pKa = 11.84KK465 pKa = 9.67KK466 pKa = 10.55CAIEE470 pKa = 3.63EE471 pKa = 4.18TRR473 pKa = 11.84RR474 pKa = 11.84VHH476 pKa = 6.82LSRR479 pKa = 11.84RR480 pKa = 11.84FPSS483 pKa = 3.19

Molecular weight: 56.87 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1773

130

624

354.6

40.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.979 ± 1.378

1.805 ± 0.53

5.697 ± 0.561

5.133 ± 0.566

5.979 ± 0.711

6.091 ± 0.791

2.538 ± 0.683

5.64 ± 0.546

5.753 ± 0.444

8.404 ± 0.474

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.143 ± 0.715

6.43 ± 0.842

3.553 ± 0.478

3.892 ± 0.932

4.625 ± 0.681

9.081 ± 0.779

5.302 ± 0.746

6.035 ± 0.617

0.79 ± 0.283

5.133 ± 1.196
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski